EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000017742 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 14357 bases
Position: chrQEPC01004521.1:2689569-2703925
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000023119	PRP38	PF03371.15	2.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000024654	-	2126	-	ENSSPUP00000023119	546 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000017742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000017742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000017742	-	100	84.601	ENSBTAG00000047874	PRPF38B	100	84.783	Bos_taurus
ENSSPUG00000017742	-	100	70.599	ENSCAFG00020010992	-	100	77.495	Canis_lupus_dingo
ENSSPUG00000017742	-	100	84.601	ENSCHIG00000024357	-	100	84.783	Capra_hircus
ENSSPUG00000017742	-	79	81.671	ENSCAPG00000009606	-	98	84.726	Cavia_aperea
ENSSPUG00000017742	-	100	81.502	ENSCPOG00000039545	-	100	83.394	Cavia_porcellus
ENSSPUG00000017742	-	100	83.485	ENSCLAG00000005801	-	100	83.848	Chinchilla_lanigera
ENSSPUG00000017742	-	64	76.487	ENSCHOG00000008972	-	100	73.654	Choloepus_hoffmanni
ENSSPUG00000017742	-	100	90.364	ENSCPBG00000028299	-	100	89.636	Chrysemys_picta_bellii
ENSSPUG00000017742	-	82	78.634	ENSETEG00000014690	-	100	82.159	Echinops_telfairi
ENSSPUG00000017742	-	100	88.768	ENSGALG00000001972	-	100	87.862	Gallus_gallus
ENSSPUG00000017742	-	100	90.545	ENSGAGG00000001563	-	100	89.818	Gopherus_agassizii
ENSSPUG00000017742	-	100	84.000	ENSHGLG00000016583	PRPF38B	100	83.935	Heterocephalus_glaber_female
ENSSPUG00000017742	-	100	83.818	ENSHGLG00100015525	-	100	83.755	Heterocephalus_glaber_male
ENSSPUG00000017742	-	93	75.285	ENSLACG00000015511	-	96	75.379	Latimeria_chalumnae
ENSSPUG00000017742	-	60	88.182	ENSMOCG00000020285	-	100	82.847	Microtus_ochrogaster
ENSSPUG00000017742	-	56	93.092	ENSMODG00000002350	-	100	96.403	Monodelphis_domestica
ENSSPUG00000017742	-	77	61.489	ENSMALG00000019479	-	98	63.690	Monopterus_albus
ENSSPUG00000017742	-	83	64.509	ENSONIG00000010129	-	98	64.087	Oreochromis_niloticus
ENSSPUG00000017742	-	95	73.394	ENSOANG00000007343	-	99	87.382	Ornithorhynchus_anatinus
ENSSPUG00000017742	-	83	64.059	ENSORLG00000015621	-	90	89.873	Oryzias_latipes
ENSSPUG00000017742	-	91	61.736	ENSORLG00020016276	-	90	89.873	Oryzias_latipes_hni
ENSSPUG00000017742	-	91	62.109	ENSORLG00015016270	-	76	89.873	Oryzias_latipes_hsok
ENSSPUG00000017742	-	83	64.482	ENSOMEG00000022050	-	92	89.375	Oryzias_melastigma
ENSSPUG00000017742	-	100	82.727	ENSOGAG00000027048	-	100	82.909	Otolemur_garnettii
ENSSPUG00000017742	-	100	84.124	ENSOARG00000018899	-	100	84.307	Ovis_aries
ENSSPUG00000017742	-	98	60.589	ENSPKIG00000004815	-	55	78.114	Paramormyrops_kingsleyae
ENSSPUG00000017742	-	100	89.091	ENSPSIG00000016569	-	100	89.091	Pelodiscus_sinensis
ENSSPUG00000017742	-	91	61.905	ENSPFOG00000004025	-	83	90.506	Poecilia_formosa
ENSSPUG00000017742	-	84	62.552	ENSPMEG00000004807	-	96	63.636	Poecilia_mexicana
ENSSPUG00000017742	-	91	62.103	ENSPREG00000015599	-	85	90.506	Poecilia_reticulata
ENSSPUG00000017742	-	100	80.909	ENSRNOG00000020438	Prpf38b	100	82.459	Rattus_norvegicus
ENSSPUG00000017742	-	93	60.862	ENSSFOG00015011251	-	79	94.737	Scleropages_formosus
ENSSPUG00000017742	-	83	61.777	ENSSLDG00000023487	-	85	89.873	Seriola_lalandi_dorsalis
ENSSPUG00000017742	-	76	63.953	ENSTNIG00000015299	-	53	86.697	Tetraodon_nigroviridis
ENSSPUG00000017742	-	93	82.583	ENSTBEG00000007504	-	100	83.170	Tupaia_belangeri
ENSSPUG00000017742	-	100	85.036	ENSTTRG00000006479	-	100	84.936	Tursiops_truncatus
ENSSPUG00000017742	-	92	80.435	ENSVPAG00000005541	-	94	80.235	Vicugna_pacos
ENSSPUG00000017742	-	93	73.684	ENSXETG00000005260	prpf38b	96	70.633	Xenopus_tropicalis