EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000018097 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 91298 bases
Position: chrQEPC01001041.1:7781016-7872313
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000023628	DEAD	PF00270.29	8.4e-24	1	1
ENSSPUP00000023621	DEAD	PF00270.29	9.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000025202	-	1392	-	ENSSPUP00000023621	463 (aa)	-	-
ENSSPUT00000025209	-	1365	-	ENSSPUP00000023628	454 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000018097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000018097's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000018097	-	86	33.256	ENSSPUG00000005794	DDX41	68	32.802
ENSSPUG00000018097	-	72	34.574	ENSSPUG00000007260	DDX4	63	34.574
ENSSPUG00000018097	-	74	33.422	ENSSPUG00000015687	DDX27	63	32.243
ENSSPUG00000018097	-	78	32.250	ENSSPUG00000004958	DDX47	87	32.250
ENSSPUG00000018097	-	75	31.892	ENSSPUG00000010688	DDX49	77	31.892
ENSSPUG00000018097	-	71	31.161	ENSSPUG00000013935	EIF4A3	84	31.161
ENSSPUG00000018097	-	88	39.503	ENSSPUG00000004555	-	75	38.689
ENSSPUG00000018097	-	79	33.570	ENSSPUG00000005312	-	58	33.911
ENSSPUG00000018097	-	71	30.084	ENSSPUG00000014154	EIF4A2	87	30.084
ENSSPUG00000018097	-	89	39.238	ENSSPUG00000011141	-	69	38.608

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000018097	-	95	62.316	ENSAPOG00000001712	ddx43	69	61.303	Acanthochromis_polyacanthus
ENSSPUG00000018097	-	95	60.659	ENSACIG00000012170	ddx43	76	59.787	Amphilophus_citrinellus
ENSSPUG00000018097	-	95	63.090	ENSAOCG00000001331	ddx43	68	61.777	Amphiprion_ocellaris
ENSSPUG00000018097	-	95	63.090	ENSAPEG00000001133	ddx43	68	61.777	Amphiprion_percula
ENSSPUG00000018097	-	95	61.111	ENSATEG00000012664	ddx43	72	59.267	Anabas_testudineus
ENSSPUG00000018097	-	98	69.654	ENSAPLG00000010182	-	100	69.654	Anas_platyrhynchos
ENSSPUG00000018097	-	99	72.435	ENSACAG00000004387	-	75	72.435	Anolis_carolinensis
ENSSPUG00000018097	-	95	62.313	ENSACLG00000026081	ddx43	69	61.250	Astatotilapia_calliptera
ENSSPUG00000018097	-	97	62.791	ENSAMXG00000004457	ddx43	65	62.791	Astyanax_mexicanus
ENSSPUG00000018097	-	94	40.552	WBGene00013214	Y54G11A.3	93	40.552	Caenorhabditis_elegans
ENSSPUG00000018097	-	86	52.857	ENSCVAG00000009980	ddx43	63	53.571	Cyprinodon_variegatus
ENSSPUG00000018097	-	94	65.011	ENSDARG00000022614	ddx43	65	64.530	Danio_rerio
ENSSPUG00000018097	-	95	49.362	FBgn0037549	CG7878	70	48.171	Drosophila_melanogaster
ENSSPUG00000018097	-	92	42.082	ENSETEG00000014626	-	88	41.561	Echinops_telfairi
ENSSPUG00000018097	-	67	48.178	ENSETEG00000019547	-	53	46.923	Echinops_telfairi
ENSSPUG00000018097	-	53	67.213	ENSEBUG00000010146	-	84	67.213	Eptatretus_burgeri
ENSSPUG00000018097	-	95	62.796	ENSELUG00000012126	ddx43	71	62.500	Esox_lucius
ENSSPUG00000018097	-	99	71.227	ENSFALG00000007042	-	73	71.227	Ficedula_albicollis
ENSSPUG00000018097	-	96	60.341	ENSFHEG00000011226	ddx43	86	60.000	Fundulus_heteroclitus
ENSSPUG00000018097	-	92	59.101	ENSGMOG00000004178	ddx43	97	59.101	Gadus_morhua
ENSSPUG00000018097	-	89	70.022	ENSGALG00000015928	-	99	70.022	Gallus_gallus
ENSSPUG00000018097	-	95	62.366	ENSGAFG00000012622	ddx43	70	60.656	Gambusia_affinis
ENSSPUG00000018097	-	92	62.031	ENSGACG00000012072	ddx43	84	63.593	Gasterosteus_aculeatus
ENSSPUG00000018097	-	94	75.267	ENSGAGG00000025230	-	72	75.267	Gopherus_agassizii
ENSSPUG00000018097	-	95	61.884	ENSHBUG00000011653	ddx43	69	61.042	Haplochromis_burtoni
ENSSPUG00000018097	-	96	60.593	ENSHCOG00000014704	ddx43	73	59.751	Hippocampus_comes
ENSSPUG00000018097	-	96	63.889	ENSIPUG00000023423	ddx43	69	63.559	Ictalurus_punctatus
ENSSPUG00000018097	-	96	60.768	ENSKMAG00000016167	ddx43	67	60.768	Kryptolebias_marmoratus
ENSSPUG00000018097	-	94	61.638	ENSLBEG00000007913	ddx43	69	60.291	Labrus_bergylta
ENSSPUG00000018097	-	87	69.104	ENSLACG00000000741	ddx43	87	69.104	Latimeria_chalumnae
ENSSPUG00000018097	-	96	63.866	ENSLOCG00000016170	ddx43	73	63.115	Lepisosteus_oculatus
ENSSPUG00000018097	-	95	59.873	ENSMAMG00000022128	ddx43	69	59.336	Mastacembelus_armatus
ENSSPUG00000018097	-	95	62.313	ENSMZEG00005027349	ddx43	69	61.250	Maylandia_zebra
ENSSPUG00000018097	-	98	70.061	ENSMGAG00000013832	-	83	70.061	Meleagris_gallopavo
ENSSPUG00000018097	-	94	62.716	ENSMMOG00000007346	ddx43	72	61.570	Mola_mola
ENSSPUG00000018097	-	96	57.531	ENSMODG00000014335	-	80	57.531	Monodelphis_domestica
ENSSPUG00000018097	-	100	62.651	ENSMODG00000018546	-	75	62.651	Monodelphis_domestica
ENSSPUG00000018097	-	96	62.047	ENSMALG00000020673	ddx43	72	61.203	Monopterus_albus
ENSSPUG00000018097	-	95	62.099	ENSNBRG00000010942	ddx43	71	61.250	Neolamprologus_brichardi
ENSSPUG00000018097	-	95	62.099	ENSONIG00000001195	ddx43	73	61.378	Oreochromis_niloticus
ENSSPUG00000018097	-	57	64.094	ENSOANG00000006467	-	78	62.783	Ornithorhynchus_anatinus
ENSSPUG00000018097	-	59	80.000	ENSOANG00000010479	-	97	80.000	Ornithorhynchus_anatinus
ENSSPUG00000018097	-	96	60.722	ENSORLG00000002267	ddx43	74	59.834	Oryzias_latipes
ENSSPUG00000018097	-	96	60.722	ENSORLG00020018592	ddx43	73	60.722	Oryzias_latipes_hni
ENSSPUG00000018097	-	96	60.510	ENSORLG00015004854	ddx43	74	59.792	Oryzias_latipes_hsok
ENSSPUG00000018097	-	96	61.783	ENSOMEG00000023418	ddx43	75	61.031	Oryzias_melastigma
ENSSPUG00000018097	-	96	62.766	ENSPKIG00000002941	ddx43	67	62.766	Paramormyrops_kingsleyae
ENSSPUG00000018097	-	93	77.412	ENSPSIG00000002202	-	73	77.681	Pelodiscus_sinensis
ENSSPUG00000018097	-	58	50.338	ENSPMAG00000006112	ddx43	98	51.724	Petromyzon_marinus
ENSSPUG00000018097	-	98	55.031	ENSPCIG00000002492	-	77	55.031	Phascolarctos_cinereus
ENSSPUG00000018097	-	90	64.523	ENSPCIG00000017981	-	99	64.523	Phascolarctos_cinereus
ENSSPUG00000018097	-	96	61.099	ENSPFOG00000004241	ddx43	70	59.796	Poecilia_formosa
ENSSPUG00000018097	-	96	61.099	ENSPLAG00000023362	ddx43	70	59.796	Poecilia_latipinna
ENSSPUG00000018097	-	96	61.099	ENSPMEG00000004870	ddx43	70	59.796	Poecilia_mexicana
ENSSPUG00000018097	-	96	60.554	ENSPREG00000000923	ddx43	73	60.797	Poecilia_reticulata
ENSSPUG00000018097	-	95	58.458	ENSPNYG00000009064	ddx43	70	57.708	Pundamilia_nyererei
ENSSPUG00000018097	-	97	63.425	ENSPNAG00000001232	ddx43	66	64.103	Pygocentrus_nattereri
ENSSPUG00000018097	-	99	62.777	ENSSHAG00000001847	-	76	62.777	Sarcophilus_harrisii
ENSSPUG00000018097	-	99	58.907	ENSSHAG00000016933	-	84	58.907	Sarcophilus_harrisii
ENSSPUG00000018097	-	96	61.653	ENSSFOG00015012193	ddx43	74	61.653	Scleropages_formosus
ENSSPUG00000018097	-	97	62.605	ENSSMAG00000019288	ddx43	65	62.343	Scophthalmus_maximus
ENSSPUG00000018097	-	94	62.716	ENSSDUG00000020120	ddx43	67	61.426	Seriola_dumerili
ENSSPUG00000018097	-	94	60.860	ENSSLDG00000017225	ddx43	67	59.833	Seriola_lalandi_dorsalis
ENSSPUG00000018097	-	95	62.876	ENSSPAG00000006858	ddx43	69	61.925	Stegastes_partitus
ENSSPUG00000018097	-	99	70.850	ENSTGUG00000012684	-	81	70.850	Taeniopygia_guttata
ENSSPUG00000018097	-	94	58.478	ENSTRUG00000012795	ddx43	70	57.442	Takifugu_rubripes
ENSSPUG00000018097	-	96	60.638	ENSTNIG00000009822	ddx43	82	59.792	Tetraodon_nigroviridis
ENSSPUG00000018097	-	98	68.815	ENSXETG00000011767	ddx43	72	68.815	Xenopus_tropicalis
ENSSPUG00000018097	-	96	61.311	ENSXCOG00000013810	ddx43	76	59.798	Xiphophorus_couchianus
ENSSPUG00000018097	-	96	61.311	ENSXMAG00000017126	ddx43	67	61.311	Xiphophorus_maculatus