EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000018260 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 54608 bases
Position: chrQEPC01014492.1:830988-885595
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000023814	PRP1_N	PF06424.12	3.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000025407	PRPF6-201	3817	-	ENSSPUP00000023814	881 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000018260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000018260's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000018260	PRPF6	100	96.032	ENSG00000101161	PRPF6	94	96.032	Homo_sapiens
ENSSPUG00000018260	PRPF6	100	91.146	ENSAPOG00000010395	prpf6	90	91.600	Acanthochromis_polyacanthus
ENSSPUG00000018260	PRPF6	100	96.599	ENSAMEG00000001916	PRPF6	93	96.599	Ailuropoda_melanoleuca
ENSSPUG00000018260	PRPF6	98	91.792	ENSACIG00000019862	prpf6	88	91.792	Amphilophus_citrinellus
ENSSPUG00000018260	PRPF6	100	91.260	ENSAOCG00000012988	prpf6	90	91.714	Amphiprion_ocellaris
ENSSPUG00000018260	PRPF6	100	84.677	ENSAPEG00000008301	prpf6	93	85.017	Amphiprion_percula
ENSSPUG00000018260	PRPF6	98	91.329	ENSATEG00000005581	prpf6	88	91.329	Anabas_testudineus
ENSSPUG00000018260	PRPF6	100	97.846	ENSACAG00000006464	PRPF6	89	97.846	Anolis_carolinensis
ENSSPUG00000018260	PRPF6	100	96.145	ENSANAG00000012661	PRPF6	94	96.145	Aotus_nancymaae
ENSSPUG00000018260	PRPF6	100	91.260	ENSACLG00000025875	prpf6	90	91.714	Astatotilapia_calliptera
ENSSPUG00000018260	PRPF6	100	91.260	ENSAMXG00000001929	prpf6	90	91.714	Astyanax_mexicanus
ENSSPUG00000018260	PRPF6	100	96.259	ENSBTAG00000011656	PRPF6	94	96.259	Bos_taurus
ENSSPUG00000018260	PRPF6	100	96.145	ENSCJAG00000010616	PRPF6	94	96.145	Callithrix_jacchus
ENSSPUG00000018260	PRPF6	100	96.939	ENSCAFG00000013165	PRPF6	94	96.939	Canis_familiaris
ENSSPUG00000018260	PRPF6	100	96.939	ENSCAFG00020002050	PRPF6	94	96.939	Canis_lupus_dingo
ENSSPUG00000018260	PRPF6	100	96.259	ENSCHIG00000018187	PRPF6	94	96.259	Capra_hircus
ENSSPUG00000018260	PRPF6	100	97.052	ENSTSYG00000007814	PRPF6	94	97.052	Carlito_syrichta
ENSSPUG00000018260	PRPF6	100	95.578	ENSCAPG00000015077	PRPF6	96	95.578	Cavia_aperea
ENSSPUG00000018260	PRPF6	100	96.825	ENSCPOG00000007518	PRPF6	94	96.825	Cavia_porcellus
ENSSPUG00000018260	PRPF6	100	92.517	ENSCCAG00000024564	PRPF6	94	92.517	Cebus_capucinus
ENSSPUG00000018260	PRPF6	100	96.145	ENSCATG00000037473	PRPF6	92	98.761	Cercocebus_atys
ENSSPUG00000018260	PRPF6	100	92.630	ENSCLAG00000003854	PRPF6	94	92.630	Chinchilla_lanigera
ENSSPUG00000018260	PRPF6	100	90.878	ENSCSAG00000016742	PRPF6	94	90.878	Chlorocebus_sabaeus
ENSSPUG00000018260	PRPF6	90	80.650	ENSCHOG00000003315	-	100	80.650	Choloepus_hoffmanni
ENSSPUG00000018260	PRPF6	100	97.279	ENSCPBG00000013964	PRPF6	90	97.279	Chrysemys_picta_bellii
ENSSPUG00000018260	PRPF6	100	72.328	ENSCING00000008817	-	91	72.936	Ciona_intestinalis
ENSSPUG00000018260	PRPF6	100	96.032	ENSCANG00000038230	PRPF6	94	96.032	Colobus_angolensis_palliatus
ENSSPUG00000018260	PRPF6	100	96.825	ENSCGRG00001022666	Prpf6	94	96.825	Cricetulus_griseus_chok1gshd
ENSSPUG00000018260	PRPF6	100	85.812	ENSCSEG00000018561	prpf6	94	86.266	Cynoglossus_semilaevis
ENSSPUG00000018260	PRPF6	100	91.033	ENSCVAG00000010550	prpf6	90	91.487	Cyprinodon_variegatus
ENSSPUG00000018260	PRPF6	98	91.686	ENSDARG00000091367	prpf6	91	91.686	Danio_rerio
ENSSPUG00000018260	PRPF6	100	95.918	ENSDNOG00000040544	PRPF6	94	95.918	Dasypus_novemcinctus
ENSSPUG00000018260	PRPF6	97	95.794	ENSDORG00000005406	Prpf6	100	95.794	Dipodomys_ordii
ENSSPUG00000018260	PRPF6	98	73.023	FBgn0036828	CG6841	91	72.929	Drosophila_melanogaster
ENSSPUG00000018260	PRPF6	84	98.333	ENSETEG00000004447	PRPF6	78	98.148	Echinops_telfairi
ENSSPUG00000018260	PRPF6	100	86.102	ENSEBUG00000008835	prpf6	94	86.102	Eptatretus_burgeri
ENSSPUG00000018260	PRPF6	100	96.372	ENSEASG00005023115	PRPF6	94	96.372	Equus_asinus_asinus
ENSSPUG00000018260	PRPF6	100	91.837	ENSECAG00000013983	PRPF6	93	91.837	Equus_caballus
ENSSPUG00000018260	PRPF6	93	92.841	ENSEEUG00000000180	PRPF6	78	92.841	Erinaceus_europaeus
ENSSPUG00000018260	PRPF6	100	90.806	ENSELUG00000001945	prpf6	87	90.806	Esox_lucius
ENSSPUG00000018260	PRPF6	100	96.599	ENSFCAG00000001183	PRPF6	94	96.599	Felis_catus
ENSSPUG00000018260	PRPF6	100	97.166	ENSFALG00000010326	-	91	97.166	Ficedula_albicollis
ENSSPUG00000018260	PRPF6	99	90.671	ENSFALG00000006046	-	91	90.671	Ficedula_albicollis
ENSSPUG00000018260	PRPF6	100	96.825	ENSFDAG00000006451	PRPF6	100	96.825	Fukomys_damarensis
ENSSPUG00000018260	PRPF6	100	92.168	ENSFHEG00000000560	prpf6	90	92.168	Fundulus_heteroclitus
ENSSPUG00000018260	PRPF6	100	88.649	ENSGMOG00000015622	prpf6	91	89.133	Gadus_morhua
ENSSPUG00000018260	PRPF6	100	97.619	ENSGALG00000006001	PRPF6	94	97.619	Gallus_gallus
ENSSPUG00000018260	PRPF6	100	86.606	ENSGAFG00000021109	prpf6	90	87.060	Gambusia_affinis
ENSSPUG00000018260	PRPF6	100	89.290	ENSGACG00000002576	prpf6	93	89.290	Gasterosteus_aculeatus
ENSSPUG00000018260	PRPF6	100	97.166	ENSGAGG00000008653	PRPF6	90	97.166	Gopherus_agassizii
ENSSPUG00000018260	PRPF6	100	96.032	ENSGGOG00000016876	PRPF6	97	98.074	Gorilla_gorilla
ENSSPUG00000018260	PRPF6	100	91.260	ENSHBUG00000004496	prpf6	90	91.714	Haplochromis_burtoni
ENSSPUG00000018260	PRPF6	100	96.825	ENSHGLG00000009222	PRPF6	94	96.825	Heterocephalus_glaber_female
ENSSPUG00000018260	PRPF6	100	96.825	ENSHGLG00100016600	PRPF6	96	96.825	Heterocephalus_glaber_male
ENSSPUG00000018260	PRPF6	100	89.671	ENSHCOG00000011513	prpf6	90	90.125	Hippocampus_comes
ENSSPUG00000018260	PRPF6	98	92.263	ENSIPUG00000004912	prpf6	89	92.263	Ictalurus_punctatus
ENSSPUG00000018260	PRPF6	100	93.771	ENSSTOG00000002922	PRPF6	94	93.545	Ictidomys_tridecemlineatus
ENSSPUG00000018260	PRPF6	100	96.825	ENSJJAG00000000836	Prpf6	94	96.825	Jaculus_jaculus
ENSSPUG00000018260	PRPF6	98	92.139	ENSKMAG00000017800	prpf6	88	92.139	Kryptolebias_marmoratus
ENSSPUG00000018260	PRPF6	100	90.352	ENSLBEG00000012582	prpf6	90	90.352	Labrus_bergylta
ENSSPUG00000018260	PRPF6	100	93.084	ENSLOCG00000004827	prpf6	89	93.537	Lepisosteus_oculatus
ENSSPUG00000018260	PRPF6	100	96.032	ENSLAFG00000005272	PRPF6	94	96.032	Loxodonta_africana
ENSSPUG00000018260	PRPF6	100	96.032	ENSMFAG00000037542	PRPF6	97	98.074	Macaca_fascicularis
ENSSPUG00000018260	PRPF6	97	98.440	ENSMMUG00000015558	PRPF6	98	98.440	Macaca_mulatta
ENSSPUG00000018260	PRPF6	100	81.017	ENSMNEG00000045555	PRPF6	93	81.017	Macaca_nemestrina
ENSSPUG00000018260	PRPF6	100	91.260	ENSMAMG00000010718	prpf6	90	91.714	Mastacembelus_armatus
ENSSPUG00000018260	PRPF6	100	91.373	ENSMZEG00005026539	prpf6	100	91.827	Maylandia_zebra
ENSSPUG00000018260	PRPF6	100	90.703	ENSMZEG00005015261	-	93	91.156	Maylandia_zebra
ENSSPUG00000018260	PRPF6	100	97.392	ENSMGAG00000006634	PRPF6	96	97.392	Meleagris_gallopavo
ENSSPUG00000018260	PRPF6	100	96.825	ENSMAUG00000013969	Prpf6	94	96.825	Mesocricetus_auratus
ENSSPUG00000018260	PRPF6	93	96.107	ENSMICG00000017793	PRPF6	99	96.107	Microcebus_murinus
ENSSPUG00000018260	PRPF6	100	96.825	ENSMOCG00000001701	Prpf6	94	96.825	Microtus_ochrogaster
ENSSPUG00000018260	PRPF6	98	91.214	ENSMMOG00000020419	prpf6	92	91.214	Mola_mola
ENSSPUG00000018260	PRPF6	99	97.739	ENSMODG00000017051	PRPF6	92	97.739	Monodelphis_domestica
ENSSPUG00000018260	PRPF6	100	91.260	ENSMALG00000000089	prpf6	95	91.260	Monopterus_albus
ENSSPUG00000018260	PRPF6	100	89.796	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSSPUG00000018260	PRPF6	100	96.825	ENSMUSG00000002455	Prpf6	100	98.148	Mus_musculus
ENSSPUG00000018260	PRPF6	100	96.825	MGP_PahariEiJ_G0026262	Prpf6	100	98.148	Mus_pahari
ENSSPUG00000018260	PRPF6	100	96.825	MGP_SPRETEiJ_G0025741	Prpf6	100	98.148	Mus_spretus
ENSSPUG00000018260	PRPF6	99	96.424	ENSMPUG00000008673	PRPF6	99	96.424	Mustela_putorius_furo
ENSSPUG00000018260	PRPF6	100	96.825	ENSNGAG00000003365	Prpf6	94	96.825	Nannospalax_galili
ENSSPUG00000018260	PRPF6	100	91.373	ENSNBRG00000015025	prpf6	90	91.827	Neolamprologus_brichardi
ENSSPUG00000018260	PRPF6	100	96.145	ENSNLEG00000010208	PRPF6	97	96.667	Nomascus_leucogenys
ENSSPUG00000018260	PRPF6	100	87.751	ENSMEUG00000009824	-	84	87.945	Notamacropus_eugenii
ENSSPUG00000018260	PRPF6	100	90.476	ENSODEG00000004841	PRPF6	94	90.476	Octodon_degus
ENSSPUG00000018260	PRPF6	100	91.260	ENSONIG00000017406	prpf6	90	91.714	Oreochromis_niloticus
ENSSPUG00000018260	PRPF6	100	97.392	ENSOANG00000004920	PRPF6	94	97.392	Ornithorhynchus_anatinus
ENSSPUG00000018260	PRPF6	100	95.692	ENSOCUG00000014151	PRPF6	95	95.692	Oryctolagus_cuniculus
ENSSPUG00000018260	PRPF6	100	91.487	ENSORLG00000009592	prpf6	90	91.487	Oryzias_latipes
ENSSPUG00000018260	PRPF6	100	91.600	ENSORLG00020001458	prpf6	90	91.600	Oryzias_latipes_hni
ENSSPUG00000018260	PRPF6	100	91.600	ENSORLG00015018762	prpf6	90	91.600	Oryzias_latipes_hsok
ENSSPUG00000018260	PRPF6	100	91.146	ENSOMEG00000012174	prpf6	90	91.600	Oryzias_melastigma
ENSSPUG00000018260	PRPF6	100	88.448	ENSOGAG00000007573	PRPF6	94	88.448	Otolemur_garnettii
ENSSPUG00000018260	PRPF6	100	96.259	ENSOARG00000008776	PRPF6	93	96.259	Ovis_aries
ENSSPUG00000018260	PRPF6	100	96.032	ENSPPAG00000008686	PRPF6	97	98.074	Pan_paniscus
ENSSPUG00000018260	PRPF6	100	96.485	ENSPPRG00000008497	PRPF6	94	96.485	Panthera_pardus
ENSSPUG00000018260	PRPF6	100	96.485	ENSPTIG00000011184	PRPF6	94	96.485	Panthera_tigris_altaica
ENSSPUG00000018260	PRPF6	100	96.032	ENSPTRG00000013765	PRPF6	97	98.074	Pan_troglodytes
ENSSPUG00000018260	PRPF6	100	95.918	ENSPANG00000024135	PRPF6	94	95.918	Papio_anubis
ENSSPUG00000018260	PRPF6	100	92.404	ENSPKIG00000005627	prpf6	92	92.857	Paramormyrops_kingsleyae
ENSSPUG00000018260	PRPF6	100	97.506	ENSPSIG00000007717	PRPF6	100	97.506	Pelodiscus_sinensis
ENSSPUG00000018260	PRPF6	98	89.376	ENSPMGG00000008925	prpf6	89	89.145	Periophthalmus_magnuspinnatus
ENSSPUG00000018260	PRPF6	100	96.712	ENSPEMG00000016036	Prpf6	94	96.712	Peromyscus_maniculatus_bairdii
ENSSPUG00000018260	PRPF6	100	87.330	ENSPMAG00000006144	prpf6	91	87.788	Petromyzon_marinus
ENSSPUG00000018260	PRPF6	100	97.506	ENSPCIG00000017909	PRPF6	94	97.506	Phascolarctos_cinereus
ENSSPUG00000018260	PRPF6	100	91.723	ENSPFOG00000006431	prpf6	90	92.177	Poecilia_formosa
ENSSPUG00000018260	PRPF6	100	91.600	ENSPLAG00000005974	prpf6	90	92.054	Poecilia_latipinna
ENSSPUG00000018260	PRPF6	100	91.827	ENSPMEG00000009977	prpf6	90	92.281	Poecilia_mexicana
ENSSPUG00000018260	PRPF6	100	91.714	ENSPREG00000017993	prpf6	86	92.168	Poecilia_reticulata
ENSSPUG00000018260	PRPF6	100	95.465	ENSPPYG00000011256	PRPF6	94	95.465	Pongo_abelii
ENSSPUG00000018260	PRPF6	97	98.787	ENSPCAG00000006536	PRPF6	84	98.787	Procavia_capensis
ENSSPUG00000018260	PRPF6	100	95.805	ENSPCOG00000016881	PRPF6	94	95.805	Propithecus_coquereli
ENSSPUG00000018260	PRPF6	100	89.796	ENSPVAG00000014316	PRPF6	94	89.796	Pteropus_vampyrus
ENSSPUG00000018260	PRPF6	100	73.696	ENSPNYG00000001939	prpf6	89	79.342	Pundamilia_nyererei
ENSSPUG00000018260	PRPF6	98	92.494	ENSPNAG00000015606	prpf6	88	92.494	Pygocentrus_nattereri
ENSSPUG00000018260	PRPF6	100	96.939	ENSRNOG00000051498	Prpf6	94	96.939	Rattus_norvegicus
ENSSPUG00000018260	PRPF6	100	96.032	ENSRBIG00000043613	PRPF6	98	97.059	Rhinopithecus_bieti
ENSSPUG00000018260	PRPF6	97	97.059	ENSRROG00000040969	PRPF6	98	97.059	Rhinopithecus_roxellana
ENSSPUG00000018260	PRPF6	97	92.561	ENSSBOG00000020632	PRPF6	93	92.561	Saimiri_boliviensis_boliviensis
ENSSPUG00000018260	PRPF6	100	97.506	ENSSHAG00000016810	PRPF6	94	97.506	Sarcophilus_harrisii
ENSSPUG00000018260	PRPF6	100	92.857	ENSSFOG00015020859	prpf6	95	93.311	Scleropages_formosus
ENSSPUG00000018260	PRPF6	100	90.238	ENSSMAG00000008112	prpf6	90	90.238	Scophthalmus_maximus
ENSSPUG00000018260	PRPF6	100	90.919	ENSSDUG00000016142	prpf6	90	91.373	Seriola_dumerili
ENSSPUG00000018260	PRPF6	100	90.919	ENSSLDG00000025283	prpf6	90	91.373	Seriola_lalandi_dorsalis
ENSSPUG00000018260	PRPF6	100	90.919	ENSSPAG00000015850	prpf6	90	91.373	Stegastes_partitus
ENSSPUG00000018260	PRPF6	100	96.032	ENSSSCG00000029119	PRPF6	100	96.032	Sus_scrofa
ENSSPUG00000018260	PRPF6	100	97.279	ENSTGUG00000007221	PRPF6	93	97.279	Taeniopygia_guttata
ENSSPUG00000018260	PRPF6	98	90.867	ENSTRUG00000002920	prpf6	88	90.867	Takifugu_rubripes
ENSSPUG00000018260	PRPF6	98	84.138	ENSTNIG00000017873	prpf6	92	84.138	Tetraodon_nigroviridis
ENSSPUG00000018260	PRPF6	91	97.260	ENSTBEG00000005348	PRPF6	81	97.260	Tupaia_belangeri
ENSSPUG00000018260	PRPF6	100	95.578	ENSTTRG00000013068	PRPF6	94	95.578	Tursiops_truncatus
ENSSPUG00000018260	PRPF6	99	97.156	ENSUMAG00000021631	PRPF6	94	97.156	Ursus_maritimus
ENSSPUG00000018260	PRPF6	100	96.939	ENSVVUG00000014948	PRPF6	94	96.939	Vulpes_vulpes
ENSSPUG00000018260	PRPF6	100	94.558	ENSXETG00000012054	prpf6	91	95.238	Xenopus_tropicalis
ENSSPUG00000018260	PRPF6	100	91.827	ENSXCOG00000008082	prpf6	90	92.281	Xiphophorus_couchianus
ENSSPUG00000018260	PRPF6	100	91.827	ENSXMAG00000015581	prpf6	90	92.281	Xiphophorus_maculatus