EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000018295 (Gene tree)
Gene ID: -
Gene Symbol: POLR2B
Alias: RPB2
Full Name: RNA polymerase II subunit B
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 13184 bases
Position: chrQEPC01014874.1:782244-795427
Accession: 9188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000023850	RNA_pol_Rpb2_5	PF04567.17	1.7e-05	1	1
ENSSPUP00000023850	RNA_pol_Rpb2_7	PF04560.20	1.7e-34	1	1
ENSSPUP00000023850	RNA_pol_Rpb2_6	PF00562.28	9e-130	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000025446	POLR2B-201	1506	-	ENSSPUP00000023850	501 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000018295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000018295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000018295	POLR2B	66	45.045	ENSSPUG00000004905	-	94	45.045
ENSSPUG00000018295	POLR2B	95	37.626	ENSSPUG00000014298	POLR1B	52	37.626

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000018295	POLR2B	97	37.575	ENSG00000125630	POLR1B	67	34.071	Homo_sapiens
ENSSPUG00000018295	POLR2B	95	38.306	ENSACAG00000007117	-	69	38.306	Anolis_carolinensis
ENSSPUG00000018295	POLR2B	97	38.492	ENSANAG00000026201	POLR1B	51	38.492	Aotus_nancymaae
ENSSPUG00000018295	POLR2B	100	99.002	ENSBTAG00000019366	POLR2B	50	99.002	Bos_taurus
ENSSPUG00000018295	POLR2B	97	37.575	ENSCJAG00000016433	POLR1B	51	37.575	Callithrix_jacchus
ENSSPUG00000018295	POLR2B	97	38.370	ENSTSYG00000003669	POLR1B	51	38.370	Carlito_syrichta
ENSSPUG00000018295	POLR2B	97	37.575	ENSCCAG00000035252	POLR1B	51	37.575	Cebus_capucinus
ENSSPUG00000018295	POLR2B	97	37.575	ENSCATG00000037382	POLR1B	51	37.575	Cercocebus_atys
ENSSPUG00000018295	POLR2B	95	38.632	ENSCPBG00000003962	POLR1B	52	38.632	Chrysemys_picta_bellii
ENSSPUG00000018295	POLR2B	97	43.863	ENSCSAVG00000007982	-	56	44.375	Ciona_savignyi
ENSSPUG00000018295	POLR2B	97	37.575	ENSCANG00000039531	POLR1B	51	37.575	Colobus_angolensis_palliatus
ENSSPUG00000018295	POLR2B	76	45.455	ENSEBUG00000015791	polr1b	55	42.149	Eptatretus_burgeri
ENSSPUG00000018295	POLR2B	95	38.431	ENSFCAG00000008091	POLR1B	50	38.431	Felis_catus
ENSSPUG00000018295	POLR2B	67	79.341	ENSGAFG00000016488	-	99	79.341	Gambusia_affinis
ENSSPUG00000018295	POLR2B	97	37.575	ENSGGOG00000013494	POLR1B	51	37.575	Gorilla_gorilla
ENSSPUG00000018295	POLR2B	66	41.194	ENSHBUG00000008882	polr3b	94	41.194	Haplochromis_burtoni
ENSSPUG00000018295	POLR2B	96	38.600	ENSLAFG00000007659	POLR1B	51	38.600	Loxodonta_africana
ENSSPUG00000018295	POLR2B	100	99.002	ENSLAFG00000003198	POLR2B	54	99.002	Loxodonta_africana
ENSSPUG00000018295	POLR2B	97	37.773	ENSMFAG00000032912	POLR1B	51	37.773	Macaca_fascicularis
ENSSPUG00000018295	POLR2B	97	37.773	ENSMMUG00000009468	POLR1B	51	37.773	Macaca_mulatta
ENSSPUG00000018295	POLR2B	97	37.773	ENSMNEG00000036047	POLR1B	51	37.773	Macaca_nemestrina
ENSSPUG00000018295	POLR2B	97	37.575	ENSMLEG00000030588	POLR1B	52	37.575	Mandrillus_leucophaeus
ENSSPUG00000018295	POLR2B	100	97.206	ENSMICG00000015166	POLR2B	100	97.206	Microcebus_murinus
ENSSPUG00000018295	POLR2B	97	37.575	ENSNLEG00000001656	POLR1B	51	37.575	Nomascus_leucogenys
ENSSPUG00000018295	POLR2B	66	45.672	ENSOMEG00000010619	polr3b	94	45.672	Oryzias_melastigma
ENSSPUG00000018295	POLR2B	97	37.575	ENSPPAG00000002774	POLR1B	51	37.575	Pan_paniscus
ENSSPUG00000018295	POLR2B	95	38.431	ENSPPRG00000005760	POLR1B	50	38.431	Panthera_pardus
ENSSPUG00000018295	POLR2B	95	38.431	ENSPTIG00000013496	POLR1B	50	38.431	Panthera_tigris_altaica
ENSSPUG00000018295	POLR2B	97	37.773	ENSPTRG00000012366	POLR1B	51	37.773	Pan_troglodytes
ENSSPUG00000018295	POLR2B	97	37.575	ENSPANG00000023423	POLR1B	51	37.575	Papio_anubis
ENSSPUG00000018295	POLR2B	66	46.269	ENSPMGG00000013671	polr3b	94	46.269	Periophthalmus_magnuspinnatus
ENSSPUG00000018295	POLR2B	99	94.389	ENSPMAG00000001164	-	57	94.389	Petromyzon_marinus
ENSSPUG00000018295	POLR2B	95	45.661	ENSPMAG00000008197	-	98	45.661	Petromyzon_marinus
ENSSPUG00000018295	POLR2B	91	83.772	ENSPCOG00000009281	-	99	83.772	Propithecus_coquereli
ENSSPUG00000018295	POLR2B	97	37.575	ENSRBIG00000019757	POLR1B	51	37.575	Rhinopithecus_bieti
ENSSPUG00000018295	POLR2B	100	99.202	ENSRBIG00000042838	POLR2B	100	99.202	Rhinopithecus_bieti
ENSSPUG00000018295	POLR2B	100	99.202	ENSSBOG00000023163	POLR2B	51	99.202	Saimiri_boliviensis_boliviensis
ENSSPUG00000018295	POLR2B	97	37.575	ENSSBOG00000024562	POLR1B	51	37.575	Saimiri_boliviensis_boliviensis
ENSSPUG00000018295	POLR2B	66	46.386	ENSSPAG00000008909	polr3b	94	46.386	Stegastes_partitus
ENSSPUG00000018295	POLR2B	99	97.200	ENSSPAG00000019229	-	99	97.200	Stegastes_partitus
ENSSPUG00000018295	POLR2B	99	97.000	ENSTRUG00000008631	POLR2B	50	97.000	Takifugu_rubripes
ENSSPUG00000018295	POLR2B	95	45.041	ENSUAMG00000024267	POLR3B	74	45.041	Ursus_americanus
ENSSPUG00000018295	POLR2B	80	98.753	ENSUAMG00000003345	-	90	98.753	Ursus_americanus
ENSSPUG00000018295	POLR2B	67	79.042	ENSXCOG00000014654	-	99	79.042	Xiphophorus_couchianus