EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000018308 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 11022 bases
Position: chrQEPC01009531.1:1785000-1796021
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000023865	RRM_1	PF00076.22	5.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000025461	-	1694	-	ENSSPUP00000023865	178 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000018308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000018308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000018308	-	100	60.112	ENSSPUG00000007031	PABPN1L	74	58.683

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000018308	-	94	91.617	ENSG00000258643	BCL2L2-PABPN1	50	91.617	Homo_sapiens
ENSSPUG00000018308	-	94	91.617	ENSG00000100836	PABPN1	94	91.617	Homo_sapiens
ENSSPUG00000018308	-	94	83.929	ENSAPOG00000016425	pabpn1	71	83.929	Acanthochromis_polyacanthus
ENSSPUG00000018308	-	94	91.617	ENSAMEG00000007048	BCL2L2-PABPN1	88	91.617	Ailuropoda_melanoleuca
ENSSPUG00000018308	-	94	83.929	ENSACIG00000021744	pabpn1	94	83.929	Amphilophus_citrinellus
ENSSPUG00000018308	-	94	83.929	ENSAOCG00000015805	pabpn1	71	83.929	Amphiprion_ocellaris
ENSSPUG00000018308	-	94	83.929	ENSAPEG00000009623	pabpn1	71	83.929	Amphiprion_percula
ENSSPUG00000018308	-	94	84.524	ENSATEG00000020531	pabpn1	71	84.524	Anabas_testudineus
ENSSPUG00000018308	-	100	98.324	ENSACAG00000006185	-	63	98.324	Anolis_carolinensis
ENSSPUG00000018308	-	94	91.617	ENSANAG00000024513	-	60	91.617	Aotus_nancymaae
ENSSPUG00000018308	-	87	82.692	ENSACLG00000016374	pabpn1	50	84.354	Astatotilapia_calliptera
ENSSPUG00000018308	-	94	85.119	ENSAMXG00000000452	pabpn1	94	85.119	Astyanax_mexicanus
ENSSPUG00000018308	-	81	88.276	ENSBTAG00000050594	-	57	79.641	Bos_taurus
ENSSPUG00000018308	-	94	91.018	ENSBTAG00000053753	-	62	91.018	Bos_taurus
ENSSPUG00000018308	-	94	91.617	ENSBTAG00000006884	PABPN1	55	91.617	Bos_taurus
ENSSPUG00000018308	-	74	60.606	WBGene00003904	pabp-2	72	56.667	Caenorhabditis_elegans
ENSSPUG00000018308	-	94	89.820	ENSCJAG00000004407	-	84	89.820	Callithrix_jacchus
ENSSPUG00000018308	-	94	91.617	ENSCJAG00000007960	-	62	91.617	Callithrix_jacchus
ENSSPUG00000018308	-	94	91.617	ENSCAFG00000011482	PABPN1	55	91.617	Canis_familiaris
ENSSPUG00000018308	-	94	91.617	ENSCAFG00020006651	-	55	91.617	Canis_lupus_dingo
ENSSPUG00000018308	-	94	91.617	ENSCAFG00020007298	-	55	91.617	Canis_lupus_dingo
ENSSPUG00000018308	-	94	91.617	ENSCHIG00000012184	PABPN1	55	91.617	Capra_hircus
ENSSPUG00000018308	-	94	91.617	ENSTSYG00000033996	BCL2L2-PABPN1	94	91.617	Carlito_syrichta
ENSSPUG00000018308	-	78	89.855	ENSCAPG00000009461	-	94	90.152	Cavia_aperea
ENSSPUG00000018308	-	94	91.018	ENSCPOG00000025574	PABPN1	55	91.018	Cavia_porcellus
ENSSPUG00000018308	-	94	91.617	ENSCCAG00000033954	BCL2L2-PABPN1	62	91.617	Cebus_capucinus
ENSSPUG00000018308	-	94	91.617	ENSCATG00000038536	BCL2L2-PABPN1	62	91.617	Cercocebus_atys
ENSSPUG00000018308	-	85	88.816	ENSCLAG00000012423	PABPN1	57	88.816	Chinchilla_lanigera
ENSSPUG00000018308	-	94	90.419	ENSCSAG00000016036	PABPN1	55	90.419	Chlorocebus_sabaeus
ENSSPUG00000018308	-	94	83.832	ENSCHOG00000004798	BCL2L2-PABPN1	72	83.832	Choloepus_hoffmanni
ENSSPUG00000018308	-	100	96.629	ENSCPBG00000026060	-	100	96.629	Chrysemys_picta_bellii
ENSSPUG00000018308	-	100	63.483	ENSCING00000012468	-	69	62.275	Ciona_intestinalis
ENSSPUG00000018308	-	100	61.798	ENSCSAVG00000002001	-	93	59.880	Ciona_savignyi
ENSSPUG00000018308	-	94	79.042	ENSCANG00000030980	-	59	76.048	Colobus_angolensis_palliatus
ENSSPUG00000018308	-	94	91.617	ENSCANG00000009750	BCL2L2-PABPN1	94	91.617	Colobus_angolensis_palliatus
ENSSPUG00000018308	-	94	92.216	ENSCGRG00001019696	Pabpn1	94	92.216	Cricetulus_griseus_chok1gshd
ENSSPUG00000018308	-	94	92.216	ENSCGRG00000011102	Pabpn1	94	92.216	Cricetulus_griseus_crigri
ENSSPUG00000018308	-	94	83.333	ENSCSEG00000008774	pabpn1	71	83.333	Cynoglossus_semilaevis
ENSSPUG00000018308	-	94	81.548	ENSCVAG00000003152	pabpn1	71	84.524	Cyprinodon_variegatus
ENSSPUG00000018308	-	94	83.929	ENSDARG00000045373	pabpn1	71	83.929	Danio_rerio
ENSSPUG00000018308	-	75	63.158	ENSDARG00000087996	pabpn1l	80	64.122	Danio_rerio
ENSSPUG00000018308	-	94	91.617	ENSDNOG00000023682	PABPN1	55	91.617	Dasypus_novemcinctus
ENSSPUG00000018308	-	78	85.714	ENSDORG00000023928	-	85	88.525	Dipodomys_ordii
ENSSPUG00000018308	-	94	90.419	ENSDORG00000028966	-	55	90.419	Dipodomys_ordii
ENSSPUG00000018308	-	100	62.921	FBgn0005648	Pabp2	63	65.517	Drosophila_melanogaster
ENSSPUG00000018308	-	100	77.095	ENSEBUG00000002322	pabpn1	72	76.190	Eptatretus_burgeri
ENSSPUG00000018308	-	94	91.617	ENSEASG00005011716	PABPN1	55	91.617	Equus_asinus_asinus
ENSSPUG00000018308	-	93	90.909	ENSECAG00000011652	PABPN1	52	90.909	Equus_caballus
ENSSPUG00000018308	-	94	88.623	ENSEEUG00000012973	-	57	83.234	Erinaceus_europaeus
ENSSPUG00000018308	-	94	85.714	ENSELUG00000022654	pabpn1	70	85.714	Esox_lucius
ENSSPUG00000018308	-	94	91.617	ENSFCAG00000031922	PABPN1	55	91.617	Felis_catus
ENSSPUG00000018308	-	94	91.018	ENSFDAG00000018381	BCL2L2-PABPN1	94	91.018	Fukomys_damarensis
ENSSPUG00000018308	-	94	77.381	ENSFHEG00000007215	pabpn1	71	81.548	Fundulus_heteroclitus
ENSSPUG00000018308	-	87	85.256	ENSGMOG00000003922	pabpn1	51	86.986	Gadus_morhua
ENSSPUG00000018308	-	94	84.615	ENSGAFG00000017099	pabpn1	71	84.615	Gambusia_affinis
ENSSPUG00000018308	-	94	80.000	ENSGACG00000002167	pabpn1	73	80.000	Gasterosteus_aculeatus
ENSSPUG00000018308	-	94	78.443	ENSGGOG00000025919	-	98	76.351	Gorilla_gorilla
ENSSPUG00000018308	-	94	74.251	ENSGGOG00000039675	-	61	74.251	Gorilla_gorilla
ENSSPUG00000018308	-	94	91.617	ENSGGOG00000022683	-	62	91.617	Gorilla_gorilla
ENSSPUG00000018308	-	94	83.929	ENSHBUG00000019523	pabpn1	71	83.929	Haplochromis_burtoni
ENSSPUG00000018308	-	93	75.904	ENSHGLG00000018588	-	54	75.301	Heterocephalus_glaber_female
ENSSPUG00000018308	-	94	70.060	ENSHGLG00000009842	-	93	70.060	Heterocephalus_glaber_female
ENSSPUG00000018308	-	94	91.018	ENSHGLG00000002927	-	85	96.296	Heterocephalus_glaber_female
ENSSPUG00000018308	-	94	78.443	ENSHGLG00100018935	-	94	81.871	Heterocephalus_glaber_male
ENSSPUG00000018308	-	93	75.904	ENSHGLG00100015565	-	56	75.301	Heterocephalus_glaber_male
ENSSPUG00000018308	-	94	91.018	ENSHGLG00100006673	-	94	91.018	Heterocephalus_glaber_male
ENSSPUG00000018308	-	94	78.443	ENSHCOG00000004655	pabpn1	71	78.443	Hippocampus_comes
ENSSPUG00000018308	-	94	83.929	ENSIPUG00000008085	PABPN1	71	83.929	Ictalurus_punctatus
ENSSPUG00000018308	-	94	82.143	ENSIPUG00000000180	-	73	82.143	Ictalurus_punctatus
ENSSPUG00000018308	-	94	91.617	ENSSTOG00000029847	BCL2L2-PABPN1	94	91.617	Ictidomys_tridecemlineatus
ENSSPUG00000018308	-	94	91.617	ENSJJAG00000023507	Gm20521	94	91.617	Jaculus_jaculus
ENSSPUG00000018308	-	94	83.432	ENSKMAG00000018748	pabpn1	71	83.432	Kryptolebias_marmoratus
ENSSPUG00000018308	-	94	84.524	ENSLBEG00000027266	pabpn1	71	84.524	Labrus_bergylta
ENSSPUG00000018308	-	87	85.256	ENSLACG00000000646	pabpn1	65	87.248	Latimeria_chalumnae
ENSSPUG00000018308	-	87	83.974	ENSLOCG00000000796	pabpn1	52	85.616	Lepisosteus_oculatus
ENSSPUG00000018308	-	100	65.922	ENSLOCG00000004694	pabpn1l	76	64.881	Lepisosteus_oculatus
ENSSPUG00000018308	-	85	90.066	ENSLAFG00000031227	-	100	90.066	Loxodonta_africana
ENSSPUG00000018308	-	94	91.617	ENSMFAG00000032183	BCL2L2-PABPN1	94	91.617	Macaca_fascicularis
ENSSPUG00000018308	-	79	83.688	ENSMFAG00000031355	-	99	83.688	Macaca_fascicularis
ENSSPUG00000018308	-	94	91.617	ENSMMUG00000014747	BCL2L2-PABPN1	100	90.411	Macaca_mulatta
ENSSPUG00000018308	-	84	81.208	ENSMMUG00000048382	-	50	81.208	Macaca_mulatta
ENSSPUG00000018308	-	94	77.381	ENSMNEG00000035750	-	99	83.688	Macaca_nemestrina
ENSSPUG00000018308	-	94	91.617	ENSMNEG00000045065	BCL2L2-PABPN1	62	91.617	Macaca_nemestrina
ENSSPUG00000018308	-	94	74.405	ENSMLEG00000034623	-	99	81.560	Mandrillus_leucophaeus
ENSSPUG00000018308	-	94	91.617	ENSMLEG00000043862	BCL2L2-PABPN1	94	91.617	Mandrillus_leucophaeus
ENSSPUG00000018308	-	87	84.615	ENSMAMG00000007979	pabpn1	51	86.301	Mastacembelus_armatus
ENSSPUG00000018308	-	87	83.974	ENSMZEG00005011904	pabpn1	50	85.616	Maylandia_zebra
ENSSPUG00000018308	-	94	92.216	ENSMAUG00000007383	Gm20521	56	92.216	Mesocricetus_auratus
ENSSPUG00000018308	-	94	91.617	ENSMICG00000010002	BCL2L2-PABPN1	62	91.617	Microcebus_murinus
ENSSPUG00000018308	-	94	91.617	ENSMOCG00000018557	Gm20521	82	97.778	Microtus_ochrogaster
ENSSPUG00000018308	-	94	84.524	ENSMMOG00000005405	pabpn1	71	84.524	Mola_mola
ENSSPUG00000018308	-	92	90.854	ENSMODG00000004535	-	54	90.854	Monodelphis_domestica
ENSSPUG00000018308	-	87	84.615	ENSMALG00000019612	pabpn1	50	86.301	Monopterus_albus
ENSSPUG00000018308	-	94	91.617	MGP_CAROLIEiJ_G0019277	Pabpn1	94	91.617	Mus_caroli
ENSSPUG00000018308	-	94	91.617	MGP_CAROLIEiJ_G0019276	Gm20521	50	91.617	Mus_caroli
ENSSPUG00000018308	-	94	92.216	ENSMUSG00000092232	Gm20521	50	92.216	Mus_musculus
ENSSPUG00000018308	-	94	92.216	ENSMUSG00000022194	Pabpn1	94	92.216	Mus_musculus
ENSSPUG00000018308	-	94	92.216	MGP_PahariEiJ_G0030295	Pabpn1	100	100.000	Mus_pahari
ENSSPUG00000018308	-	94	92.216	MGP_PahariEiJ_G0030294	Gm20521	50	92.216	Mus_pahari
ENSSPUG00000018308	-	94	92.216	MGP_SPRETEiJ_G0020166	Pabpn1	94	92.216	Mus_spretus
ENSSPUG00000018308	-	94	92.216	MGP_SPRETEiJ_G0020165	Gm20521	50	92.216	Mus_spretus
ENSSPUG00000018308	-	87	91.613	ENSMPUG00000006775	-	89	91.946	Mustela_putorius_furo
ENSSPUG00000018308	-	100	92.135	ENSMLUG00000003800	-	88	92.216	Myotis_lucifugus
ENSSPUG00000018308	-	94	87.574	ENSMLUG00000012452	-	55	86.982	Myotis_lucifugus
ENSSPUG00000018308	-	94	89.820	ENSMLUG00000028677	-	61	89.820	Myotis_lucifugus
ENSSPUG00000018308	-	94	91.617	ENSNGAG00000019529	Gm20521	50	91.617	Nannospalax_galili
ENSSPUG00000018308	-	94	83.929	ENSNBRG00000023955	pabpn1	94	83.929	Neolamprologus_brichardi
ENSSPUG00000018308	-	94	91.617	ENSNLEG00000015007	-	59	91.617	Nomascus_leucogenys
ENSSPUG00000018308	-	83	66.892	ENSNLEG00000035292	-	99	66.892	Nomascus_leucogenys
ENSSPUG00000018308	-	92	75.460	ENSNLEG00000030598	-	61	74.699	Nomascus_leucogenys
ENSSPUG00000018308	-	94	79.042	ENSODEG00000003739	-	55	79.042	Octodon_degus
ENSSPUG00000018308	-	100	79.775	ENSODEG00000011555	-	89	79.042	Octodon_degus
ENSSPUG00000018308	-	94	91.018	ENSODEG00000002083	BCL2L2-PABPN1	55	91.018	Octodon_degus
ENSSPUG00000018308	-	87	83.974	ENSONIG00000008112	pabpn1	50	85.616	Oreochromis_niloticus
ENSSPUG00000018308	-	82	91.781	ENSOANG00000009218	-	100	91.781	Ornithorhynchus_anatinus
ENSSPUG00000018308	-	94	91.018	ENSOCUG00000016174	PABPN1	61	91.018	Oryctolagus_cuniculus
ENSSPUG00000018308	-	93	80.723	ENSORLG00000027900	pabpn1	61	86.301	Oryzias_latipes
ENSSPUG00000018308	-	94	84.524	ENSORLG00015000018	pabpn1	71	84.524	Oryzias_latipes_hsok
ENSSPUG00000018308	-	87	84.615	ENSOMEG00000016618	pabpn1	53	86.301	Oryzias_melastigma
ENSSPUG00000018308	-	94	91.617	ENSOGAG00000008710	PABPN1	55	91.617	Otolemur_garnettii
ENSSPUG00000018308	-	94	91.617	ENSPPAG00000028984	BCL2L2-PABPN1	89	91.946	Pan_paniscus
ENSSPUG00000018308	-	94	75.449	ENSPPAG00000039421	-	93	75.449	Pan_paniscus
ENSSPUG00000018308	-	94	91.617	ENSPPRG00000010567	PABPN1	55	91.617	Panthera_pardus
ENSSPUG00000018308	-	94	91.617	ENSPTIG00000001063	BCL2L2-PABPN1	94	91.617	Panthera_tigris_altaica
ENSSPUG00000018308	-	94	91.617	ENSPTRG00000006167	BCL2L2	62	91.617	Pan_troglodytes
ENSSPUG00000018308	-	94	72.455	ENSPTRG00000047273	-	61	72.455	Pan_troglodytes
ENSSPUG00000018308	-	94	77.976	ENSPANG00000023326	-	99	84.397	Papio_anubis
ENSSPUG00000018308	-	94	91.617	ENSPANG00000021100	BCL2L2-PABPN1	62	91.617	Papio_anubis
ENSSPUG00000018308	-	80	71.329	ENSPKIG00000008340	pabpn1l	77	61.078	Paramormyrops_kingsleyae
ENSSPUG00000018308	-	94	85.119	ENSPKIG00000008144	-	50	86.986	Paramormyrops_kingsleyae
ENSSPUG00000018308	-	94	83.929	ENSPKIG00000018052	pabpn1	71	83.929	Paramormyrops_kingsleyae
ENSSPUG00000018308	-	66	91.453	ENSPSIG00000011959	-	86	91.453	Pelodiscus_sinensis
ENSSPUG00000018308	-	87	83.974	ENSPMGG00000022027	pabpn1	53	85.616	Periophthalmus_magnuspinnatus
ENSSPUG00000018308	-	94	92.216	ENSPEMG00000008332	Gm20521	82	97.059	Peromyscus_maniculatus_bairdii
ENSSPUG00000018308	-	73	87.692	ENSPMAG00000006212	pabpn1	72	76.437	Petromyzon_marinus
ENSSPUG00000018308	-	94	91.617	ENSPCIG00000027751	-	55	91.617	Phascolarctos_cinereus
ENSSPUG00000018308	-	94	81.657	ENSPFOG00000010351	pabpn1	71	84.615	Poecilia_formosa
ENSSPUG00000018308	-	87	84.076	ENSPLAG00000022696	pabpn1	51	85.714	Poecilia_latipinna
ENSSPUG00000018308	-	94	81.657	ENSPMEG00000020856	pabpn1	71	84.615	Poecilia_mexicana
ENSSPUG00000018308	-	94	81.657	ENSPREG00000011278	pabpn1	71	84.615	Poecilia_reticulata
ENSSPUG00000018308	-	87	91.613	ENSPPYG00000005663	PABPN1	53	91.946	Pongo_abelii
ENSSPUG00000018308	-	87	72.436	ENSPCAG00000005902	PABPN1	51	72.185	Procavia_capensis
ENSSPUG00000018308	-	94	91.617	ENSPCOG00000028047	BCL2L2-PABPN1	62	91.617	Propithecus_coquereli
ENSSPUG00000018308	-	94	89.820	ENSPVAG00000005270	PABPN1	55	89.820	Pteropus_vampyrus
ENSSPUG00000018308	-	94	83.929	ENSPNYG00000013182	pabpn1	71	83.929	Pundamilia_nyererei
ENSSPUG00000018308	-	94	84.524	ENSPNAG00000023526	pabpn1	71	84.524	Pygocentrus_nattereri
ENSSPUG00000018308	-	100	61.453	ENSPNAG00000021666	pabpn1l	61	73.228	Pygocentrus_nattereri
ENSSPUG00000018308	-	94	92.216	ENSRNOG00000042195	Pabpn1	55	92.216	Rattus_norvegicus
ENSSPUG00000018308	-	94	80.240	ENSRBIG00000039547	-	60	77.246	Rhinopithecus_bieti
ENSSPUG00000018308	-	94	76.048	ENSRBIG00000042811	-	68	75.449	Rhinopithecus_bieti
ENSSPUG00000018308	-	94	80.838	ENSRROG00000040409	-	60	77.844	Rhinopithecus_roxellana
ENSSPUG00000018308	-	94	91.617	ENSRROG00000045535	BCL2L2-PABPN1	94	91.617	Rhinopithecus_roxellana
ENSSPUG00000018308	-	94	85.000	ENSSBOG00000026930	BCL2L2-PABPN1	89	91.946	Saimiri_boliviensis_boliviensis
ENSSPUG00000018308	-	94	91.617	ENSSHAG00000014841	-	77	91.617	Sarcophilus_harrisii
ENSSPUG00000018308	-	100	72.472	ENSSHAG00000007707	-	71	71.856	Sarcophilus_harrisii
ENSSPUG00000018308	-	94	84.524	ENSSFOG00015012565	pabpn1	74	84.524	Scleropages_formosus
ENSSPUG00000018308	-	94	84.524	ENSSFOG00015014718	pabpn1	71	84.524	Scleropages_formosus
ENSSPUG00000018308	-	93	64.458	ENSSFOG00015015833	pabpn1l	67	66.892	Scleropages_formosus
ENSSPUG00000018308	-	94	84.524	ENSSMAG00000020157	pabpn1	71	84.524	Scophthalmus_maximus
ENSSPUG00000018308	-	87	84.615	ENSSDUG00000020582	pabpn1	50	86.301	Seriola_dumerili
ENSSPUG00000018308	-	94	84.524	ENSSLDG00000007118	pabpn1	71	84.524	Seriola_lalandi_dorsalis
ENSSPUG00000018308	-	94	83.929	ENSSPAG00000021658	pabpn1	71	83.929	Stegastes_partitus
ENSSPUG00000018308	-	99	70.621	ENSSSCG00000034805	-	62	68.902	Sus_scrofa
ENSSPUG00000018308	-	99	52.841	ENSSSCG00000038472	-	91	52.096	Sus_scrofa
ENSSPUG00000018308	-	94	91.617	ENSSSCG00000002023	PABPN1	55	91.617	Sus_scrofa
ENSSPUG00000018308	-	94	85.714	ENSTRUG00000023664	pabpn1	71	85.714	Takifugu_rubripes
ENSSPUG00000018308	-	94	81.065	ENSTNIG00000005369	pabpn1	67	87.671	Tetraodon_nigroviridis
ENSSPUG00000018308	-	94	91.617	ENSUAMG00000024460	PABPN1	55	91.617	Ursus_americanus
ENSSPUG00000018308	-	94	91.617	ENSUMAG00000014288	BCL2L2-PABPN1	50	91.617	Ursus_maritimus
ENSSPUG00000018308	-	94	91.617	ENSVVUG00000019912	BCL2L2-PABPN1	66	91.617	Vulpes_vulpes
ENSSPUG00000018308	-	94	89.222	ENSXETG00000014597	pabpn1	56	91.018	Xenopus_tropicalis
ENSSPUG00000018308	-	97	73.143	ENSXCOG00000005158	pabpn1	89	86.184	Xiphophorus_couchianus
ENSSPUG00000018308	-	94	82.249	ENSXMAG00000006196	pabpn1	71	85.207	Xiphophorus_maculatus