EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSPUG00000018434 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Sphenodon_punctatus
Status
putative
Strand
Plus strand
Length
8419 bases
Position
chrQEPC01014874.1:899352-907770
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPUP00000024068RNA_pol_Rpb2_1PF04563.151.5e-4611
ENSSPUP00000024065RNA_pol_Rpb2_1PF04563.152e-4611
ENSSPUP00000024065RNA_pol_Rpb2_2PF04561.142e-2111
ENSSPUP00000024068RNA_pol_Rpb2_2PF04561.143e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPUT00000025668-1188-ENSSPUP00000024065395 (aa)--
ENSSPUT00000025671-1008-ENSSPUP00000024068335 (aa)--
Gene Model
Click here to download ENSSPUG00000018434's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000018434's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPUG00000018434-9083.962ENSG00000047315POLR2B7096.226Homo_sapiens
ENSSPUG00000018434-6191.163ENSDARG00000104434CABZ01048453.18891.163Danio_rerio
ENSSPUG00000018434-9081.132ENSDARG00000098783polr2b8781.132Danio_rerio
ENSSPUG00000018434-9081.761ENSGAFG00000016504POLR2B8781.761Gambusia_affinis
ENSSPUG00000018434-9082.075ENSLBEG00000010055-8782.075Labrus_bergylta
ENSSPUG00000018434-9082.075ENSLBEG00000016719POLR2B8782.075Labrus_bergylta
ENSSPUG00000018434-5135.556ENSMGAG00000012873-6935.556Meleagris_gallopavo
ENSSPUG00000018434-5035.795ENSPMAG00000002089-6435.795Petromyzon_marinus
ENSSPUG00000018434-7332.319ENSSPAG00000008931polr3b5732.319Stegastes_partitus
ENSSPUG00000018434-5136.047ENSTNIG00000012124-5636.047Tetraodon_nigroviridis
ENSSPUG00000018434-9081.761ENSXCOG00000014657POLR2B8781.761Xiphophorus_couchianus

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