EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000018472 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 159839 bases
Position: chrQEPC01004074.1:110979-270817
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000024121	zf-CCCH	PF00642.24	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000025725	RC3H1-201	3300	-	ENSSPUP00000024121	1099 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000018472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000018472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000018472	RC3H1	96	49.179	ENSSPUG00000001457	RC3H2	93	49.180

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000018472	RC3H1	100	83.961	ENSG00000135870	RC3H1	100	84.501	Homo_sapiens
ENSSPUG00000018472	RC3H1	100	84.298	ENSAMEG00000015657	RC3H1	100	84.137	Ailuropoda_melanoleuca
ENSSPUG00000018472	RC3H1	100	85.876	ENSAPLG00000005341	RC3H1	100	85.963	Anas_platyrhynchos
ENSSPUG00000018472	RC3H1	100	84.252	ENSACAG00000015271	RC3H1	100	84.252	Anolis_carolinensis
ENSSPUG00000018472	RC3H1	100	83.699	ENSANAG00000036716	RC3H1	100	84.238	Aotus_nancymaae
ENSSPUG00000018472	RC3H1	100	82.822	ENSBTAG00000052708	RC3H1	100	83.450	Bos_taurus
ENSSPUG00000018472	RC3H1	100	83.436	ENSCJAG00000009106	RC3H1	100	83.975	Callithrix_jacchus
ENSSPUG00000018472	RC3H1	100	83.333	ENSCAFG00000014434	RC3H1	100	83.961	Canis_familiaris
ENSSPUG00000018472	RC3H1	100	83.260	ENSCAFG00020017112	RC3H1	99	89.593	Canis_lupus_dingo
ENSSPUG00000018472	RC3H1	100	82.895	ENSCHIG00000002873	RC3H1	100	83.523	Capra_hircus
ENSSPUG00000018472	RC3H1	99	82.456	ENSTSYG00000003913	RC3H1	99	82.910	Carlito_syrichta
ENSSPUG00000018472	RC3H1	100	80.716	ENSCPOG00000004349	RC3H1	100	80.105	Cavia_porcellus
ENSSPUG00000018472	RC3H1	100	82.209	ENSCCAG00000025652	RC3H1	100	82.750	Cebus_capucinus
ENSSPUG00000018472	RC3H1	100	84.049	ENSCATG00000033497	RC3H1	100	84.588	Cercocebus_atys
ENSSPUG00000018472	RC3H1	100	82.544	ENSCLAG00000011267	RC3H1	100	83.070	Chinchilla_lanigera
ENSSPUG00000018472	RC3H1	96	84.186	ENSCSAG00000011823	RC3H1	85	84.749	Chlorocebus_sabaeus
ENSSPUG00000018472	RC3H1	100	87.522	ENSCPBG00000014670	RC3H1	100	87.522	Chrysemys_picta_bellii
ENSSPUG00000018472	RC3H1	100	84.063	ENSCANG00000032120	RC3H1	100	84.602	Colobus_angolensis_palliatus
ENSSPUG00000018472	RC3H1	100	82.982	ENSCGRG00001020812	Rc3h1	100	82.472	Cricetulus_griseus_chok1gshd
ENSSPUG00000018472	RC3H1	100	82.982	ENSCGRG00000011952	Rc3h1	100	82.472	Cricetulus_griseus_crigri
ENSSPUG00000018472	RC3H1	54	80.372	ENSDNOG00000011494	RC3H1	93	81.387	Dasypus_novemcinctus
ENSSPUG00000018472	RC3H1	100	83.670	ENSDORG00000004855	Rc3h1	100	83.684	Dipodomys_ordii
ENSSPUG00000018472	RC3H1	81	84.386	ENSETEG00000012064	RC3H1	87	84.524	Echinops_telfairi
ENSSPUG00000018472	RC3H1	100	82.105	ENSEASG00005017000	RC3H1	100	82.647	Equus_asinus_asinus
ENSSPUG00000018472	RC3H1	100	82.018	ENSECAG00000021208	RC3H1	100	82.559	Equus_caballus
ENSSPUG00000018472	RC3H1	89	73.284	ENSEEUG00000014861	RC3H1	93	73.284	Erinaceus_europaeus
ENSSPUG00000018472	RC3H1	100	83.874	ENSFCAG00000014924	RC3H1	100	84.501	Felis_catus
ENSSPUG00000018472	RC3H1	100	84.716	ENSFALG00000002947	RC3H1	100	84.991	Ficedula_albicollis
ENSSPUG00000018472	RC3H1	100	82.807	ENSFDAG00000013303	RC3H1	100	83.246	Fukomys_damarensis
ENSSPUG00000018472	RC3H1	100	84.649	ENSGALG00000004587	RC3H1	100	84.649	Gallus_gallus
ENSSPUG00000018472	RC3H1	100	85.764	ENSGAGG00000018194	RC3H1	100	85.764	Gopherus_agassizii
ENSSPUG00000018472	RC3H1	100	78.796	ENSGGOG00000005735	RC3H1	100	78.796	Gorilla_gorilla
ENSSPUG00000018472	RC3H1	88	77.254	ENSHGLG00000004183	-	100	77.254	Heterocephalus_glaber_female
ENSSPUG00000018472	RC3H1	100	81.930	ENSHGLG00100008577	RC3H1	100	82.456	Heterocephalus_glaber_male
ENSSPUG00000018472	RC3H1	100	83.509	ENSSTOG00000016033	RC3H1	100	83.699	Ictidomys_tridecemlineatus
ENSSPUG00000018472	RC3H1	100	83.392	ENSJJAG00000018915	Rc3h1	100	82.792	Jaculus_jaculus
ENSSPUG00000018472	RC3H1	100	71.229	ENSLACG00000016186	RC3H1	100	74.187	Latimeria_chalumnae
ENSSPUG00000018472	RC3H1	97	84.525	ENSLAFG00000004367	RC3H1	100	85.262	Loxodonta_africana
ENSSPUG00000018472	RC3H1	100	83.961	ENSMFAG00000033725	RC3H1	100	84.501	Macaca_fascicularis
ENSSPUG00000018472	RC3H1	100	83.961	ENSMMUG00000000630	RC3H1	100	84.501	Macaca_mulatta
ENSSPUG00000018472	RC3H1	100	84.049	ENSMNEG00000035968	RC3H1	100	84.588	Macaca_nemestrina
ENSSPUG00000018472	RC3H1	100	84.137	ENSMLEG00000037455	RC3H1	100	84.676	Mandrillus_leucophaeus
ENSSPUG00000018472	RC3H1	88	83.234	ENSMAUG00000020864	Rc3h1	94	82.652	Mesocricetus_auratus
ENSSPUG00000018472	RC3H1	100	83.421	ENSMICG00000003000	RC3H1	100	84.137	Microcebus_murinus
ENSSPUG00000018472	RC3H1	93	81.279	ENSMOCG00000016587	Rc3h1	98	80.639	Microtus_ochrogaster
ENSSPUG00000018472	RC3H1	100	84.224	ENSMODG00000004289	RC3H1	100	83.975	Monodelphis_domestica
ENSSPUG00000018472	RC3H1	100	82.353	MGP_CAROLIEiJ_G0014756	Rc3h1	100	82.121	Mus_caroli
ENSSPUG00000018472	RC3H1	100	82.281	ENSMUSG00000040423	Rc3h1	100	81.770	Mus_musculus
ENSSPUG00000018472	RC3H1	100	82.734	MGP_PahariEiJ_G0027992	Rc3h1	100	82.209	Mus_pahari
ENSSPUG00000018472	RC3H1	100	82.281	MGP_SPRETEiJ_G0015563	Rc3h1	100	81.770	Mus_spretus
ENSSPUG00000018472	RC3H1	100	83.947	ENSMPUG00000004747	RC3H1	100	83.786	Mustela_putorius_furo
ENSSPUG00000018472	RC3H1	100	82.807	ENSMLUG00000011127	RC3H1	100	83.523	Myotis_lucifugus
ENSSPUG00000018472	RC3H1	100	83.509	ENSNGAG00000011135	Rc3h1	100	83.173	Nannospalax_galili
ENSSPUG00000018472	RC3H1	100	84.137	ENSNLEG00000015327	RC3H1	100	84.676	Nomascus_leucogenys
ENSSPUG00000018472	RC3H1	99	72.120	ENSOPRG00000013068	RC3H1	99	72.471	Ochotona_princeps
ENSSPUG00000018472	RC3H1	100	83.158	ENSODEG00000014185	RC3H1	100	82.982	Octodon_degus
ENSSPUG00000018472	RC3H1	100	84.448	ENSOANG00000000924	RC3H1	100	84.275	Ornithorhynchus_anatinus
ENSSPUG00000018472	RC3H1	99	83.615	ENSOCUG00000004930	RC3H1	98	84.431	Oryctolagus_cuniculus
ENSSPUG00000018472	RC3H1	100	79.772	ENSOGAG00000004044	RC3H1	100	79.703	Otolemur_garnettii
ENSSPUG00000018472	RC3H1	100	83.188	ENSOARG00000013011	RC3H1	100	83.812	Ovis_aries
ENSSPUG00000018472	RC3H1	100	83.975	ENSPPAG00000039253	RC3H1	100	84.514	Pan_paniscus
ENSSPUG00000018472	RC3H1	100	83.246	ENSPPRG00000009007	RC3H1	100	83.874	Panthera_pardus
ENSSPUG00000018472	RC3H1	100	83.930	ENSPTIG00000015326	RC3H1	100	84.119	Panthera_tigris_altaica
ENSSPUG00000018472	RC3H1	100	83.975	ENSPTRG00000001702	RC3H1	100	84.514	Pan_troglodytes
ENSSPUG00000018472	RC3H1	100	83.961	ENSPANG00000008886	RC3H1	100	84.501	Papio_anubis
ENSSPUG00000018472	RC3H1	100	86.053	ENSPSIG00000016181	RC3H1	100	86.140	Pelodiscus_sinensis
ENSSPUG00000018472	RC3H1	100	82.281	ENSPEMG00000011966	Rc3h1	100	81.842	Peromyscus_maniculatus_bairdii
ENSSPUG00000018472	RC3H1	69	85.445	ENSPCIG00000002058	RC3H1	99	86.141	Phascolarctos_cinereus
ENSSPUG00000018472	RC3H1	100	82.121	ENSPPYG00000000490	RC3H1	98	84.186	Pongo_abelii
ENSSPUG00000018472	RC3H1	80	94.737	ENSPCAG00000010775	RC3H1	87	94.737	Procavia_capensis
ENSSPUG00000018472	RC3H1	82	80.806	ENSPCOG00000021795	RC3H1	96	81.674	Propithecus_coquereli
ENSSPUG00000018472	RC3H1	100	75.789	ENSPVAG00000007593	RC3H1	100	76.424	Pteropus_vampyrus
ENSSPUG00000018472	RC3H1	97	57.835	ENSPNAG00000023439	rc3h1a	95	83.784	Pygocentrus_nattereri
ENSSPUG00000018472	RC3H1	100	83.975	ENSRBIG00000037743	RC3H1	100	84.514	Rhinopithecus_bieti
ENSSPUG00000018472	RC3H1	100	83.961	ENSRROG00000036546	RC3H1	100	84.501	Rhinopithecus_roxellana
ENSSPUG00000018472	RC3H1	93	75.399	ENSSBOG00000010664	RC3H1	100	77.987	Saimiri_boliviensis_boliviensis
ENSSPUG00000018472	RC3H1	100	83.275	ENSSHAG00000007589	RC3H1	100	82.925	Sarcophilus_harrisii
ENSSPUG00000018472	RC3H1	86	79.167	ENSSARG00000004660	RC3H1	86	79.167	Sorex_araneus
ENSSPUG00000018472	RC3H1	100	84.211	ENSSSCG00000015498	RC3H1	100	84.838	Sus_scrofa
ENSSPUG00000018472	RC3H1	100	85.351	ENSTGUG00000004090	RC3H1	100	85.439	Taeniopygia_guttata
ENSSPUG00000018472	RC3H1	88	85.580	ENSTBEG00000005015	RC3H1	89	85.580	Tupaia_belangeri
ENSSPUG00000018472	RC3H1	100	82.852	ENSTTRG00000008572	RC3H1	100	83.479	Tursiops_truncatus
ENSSPUG00000018472	RC3H1	100	86.051	ENSUAMG00000019525	RC3H1	100	85.882	Ursus_americanus
ENSSPUG00000018472	RC3H1	100	84.224	ENSUMAG00000020087	RC3H1	100	84.063	Ursus_maritimus
ENSSPUG00000018472	RC3H1	91	88.739	ENSVPAG00000002591	RC3H1	92	88.739	Vicugna_pacos
ENSSPUG00000018472	RC3H1	100	83.217	ENSVVUG00000014201	RC3H1	100	83.843	Vulpes_vulpes
ENSSPUG00000018472	RC3H1	100	74.783	ENSXETG00000020030	rc3h1	100	74.261	Xenopus_tropicalis