EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000018688 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 93957 bases
Position: chrQEPC01001766.1:552587-646543
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	1	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	2	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	3	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	4	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	5	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	6	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	7	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	8	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	9	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	10	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	11	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	12	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	13	14
ENSSPUP00000024389	KH_1	PF00013.29	4.7e-188	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000026028	-	5048	-	ENSSPUP00000024389	1256 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000018688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000018688's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000018688	-	99	75.650	ENSSPUG00000009182	HDLBP	100	75.650

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000018688	-	100	83.281	ENSAPOG00000006904	hdlbpb	100	83.281	Acanthochromis_polyacanthus
ENSSPUG00000018688	-	100	79.589	ENSACIG00000016154	hdlbpb	100	79.272	Amphilophus_citrinellus
ENSSPUG00000018688	-	100	83.202	ENSAOCG00000004083	hdlbpb	100	83.202	Amphiprion_ocellaris
ENSSPUG00000018688	-	100	83.123	ENSAPEG00000012270	hdlbpb	100	83.123	Amphiprion_percula
ENSSPUG00000018688	-	100	82.671	ENSATEG00000019877	hdlbpb	100	82.671	Anabas_testudineus
ENSSPUG00000018688	-	100	94.193	ENSACAG00000003606	-	100	94.193	Anolis_carolinensis
ENSSPUG00000018688	-	100	82.571	ENSACLG00000006618	hdlbpb	100	82.571	Astatotilapia_calliptera
ENSSPUG00000018688	-	100	73.465	ENSAMXG00000019946	hdlbpb	100	73.465	Astyanax_mexicanus
ENSSPUG00000018688	-	100	82.163	ENSCSEG00000000955	hdlbpb	100	82.163	Cynoglossus_semilaevis
ENSSPUG00000018688	-	100	82.177	ENSCVAG00000005345	hdlbpb	100	82.177	Cyprinodon_variegatus
ENSSPUG00000018688	-	99	80.428	ENSDARG00000061864	hdlbpb	99	80.428	Danio_rerio
ENSSPUG00000018688	-	93	73.545	ENSEBUG00000005304	hdlbpb	96	73.202	Eptatretus_burgeri
ENSSPUG00000018688	-	100	63.208	ENSELUG00000019925	hdlbpb	100	71.934	Esox_lucius
ENSSPUG00000018688	-	88	33.667	ENSFHEG00000001701	hdlbpb	100	77.664	Fundulus_heteroclitus
ENSSPUG00000018688	-	96	81.775	ENSGMOG00000004522	hdlbpb	76	81.775	Gadus_morhua
ENSSPUG00000018688	-	100	82.571	ENSGAFG00000005278	hdlbpb	100	82.571	Gambusia_affinis
ENSSPUG00000018688	-	99	80.032	ENSGACG00000019361	hdlbpb	100	80.032	Gasterosteus_aculeatus
ENSSPUG00000018688	-	100	82.492	ENSHBUG00000018434	hdlbpb	100	82.492	Haplochromis_burtoni
ENSSPUG00000018688	-	100	79.463	ENSIPUG00000003291	HDLBP	100	80.000	Ictalurus_punctatus
ENSSPUG00000018688	-	100	82.808	ENSKMAG00000016562	hdlbpb	100	82.808	Kryptolebias_marmoratus
ENSSPUG00000018688	-	100	83.044	ENSLBEG00000027855	hdlbpb	100	83.044	Labrus_bergylta
ENSSPUG00000018688	-	100	90.455	ENSLACG00000007661	hdlbpb	91	90.455	Latimeria_chalumnae
ENSSPUG00000018688	-	100	86.169	ENSLOCG00000013909	hdlbpb	100	86.169	Lepisosteus_oculatus
ENSSPUG00000018688	-	100	82.650	ENSMAMG00000003035	hdlbpb	100	82.650	Mastacembelus_armatus
ENSSPUG00000018688	-	100	82.571	ENSMZEG00005021465	hdlbpb	100	82.571	Maylandia_zebra
ENSSPUG00000018688	-	100	81.991	ENSMMOG00000012525	hdlbpb	100	81.991	Mola_mola
ENSSPUG00000018688	-	100	81.151	ENSMALG00000008938	hdlbpb	100	81.151	Monopterus_albus
ENSSPUG00000018688	-	100	82.729	ENSNBRG00000002236	hdlbpb	100	82.729	Neolamprologus_brichardi
ENSSPUG00000018688	-	100	82.571	ENSONIG00000009211	hdlbpb	100	82.571	Oreochromis_niloticus
ENSSPUG00000018688	-	100	82.399	ENSORLG00000006581	hdlbpb	100	82.399	Oryzias_latipes
ENSSPUG00000018688	-	100	82.320	ENSORLG00020010012	hdlbpb	100	82.320	Oryzias_latipes_hni
ENSSPUG00000018688	-	100	82.478	ENSORLG00015006863	hdlbpb	100	82.478	Oryzias_latipes_hsok
ENSSPUG00000018688	-	100	82.320	ENSOMEG00000011131	hdlbpb	100	82.320	Oryzias_melastigma
ENSSPUG00000018688	-	100	84.048	ENSPKIG00000005966	hdlbpb	100	84.048	Paramormyrops_kingsleyae
ENSSPUG00000018688	-	94	85.556	ENSPMGG00000019853	hdlbpb	99	85.556	Periophthalmus_magnuspinnatus
ENSSPUG00000018688	-	95	77.303	ENSPMAG00000002131	hdlbpb	100	77.303	Petromyzon_marinus
ENSSPUG00000018688	-	88	70.890	ENSPMAG00000000249	-	99	70.890	Petromyzon_marinus
ENSSPUG00000018688	-	100	81.747	ENSPFOG00000008755	hdlbpb	100	81.747	Poecilia_formosa
ENSSPUG00000018688	-	100	82.650	ENSPLAG00000007055	hdlbpb	100	82.650	Poecilia_latipinna
ENSSPUG00000018688	-	100	82.650	ENSPMEG00000001952	hdlbpb	100	82.650	Poecilia_mexicana
ENSSPUG00000018688	-	100	82.808	ENSPREG00000012848	hdlbpb	100	82.808	Poecilia_reticulata
ENSSPUG00000018688	-	100	82.557	ENSPNYG00000022467	hdlbpb	100	82.557	Pundamilia_nyererei
ENSSPUG00000018688	-	100	81.948	ENSPNAG00000011104	hdlbpb	100	81.948	Pygocentrus_nattereri
ENSSPUG00000018688	-	100	83.333	ENSSFOG00015023199	hdlbpb	100	83.333	Scleropages_formosus
ENSSPUG00000018688	-	100	82.886	ENSSMAG00000008790	hdlbpb	100	82.886	Scophthalmus_maximus
ENSSPUG00000018688	-	100	82.715	ENSSDUG00000020694	hdlbpb	100	82.715	Seriola_dumerili
ENSSPUG00000018688	-	100	82.557	ENSSLDG00000020807	hdlbpb	100	82.557	Seriola_lalandi_dorsalis
ENSSPUG00000018688	-	100	83.123	ENSSPAG00000016969	hdlbpb	100	83.123	Stegastes_partitus
ENSSPUG00000018688	-	98	80.048	ENSTRUG00000012888	hdlbpb	99	80.048	Takifugu_rubripes
ENSSPUG00000018688	-	99	81.206	ENSTNIG00000002555	hdlbpb	100	81.206	Tetraodon_nigroviridis
ENSSPUG00000018688	-	100	61.831	ENSXCOG00000001797	hdlbpb	100	76.344	Xiphophorus_couchianus
ENSSPUG00000018688	-	100	82.571	ENSXMAG00000015633	hdlbpb	100	82.571	Xiphophorus_maculatus