EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000018863 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 39035 bases
Position: chrQEPC01015251.1:355110-394144
Accession: 10765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000024621	PRP21_like_P	PF12230.8	6.6e-52	1	1
ENSSPUP00000024621	Surp	PF01805.20	3.8e-44	1	2
ENSSPUP00000024621	Surp	PF01805.20	3.8e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000026275	SF3A1-201	2940	-	ENSSPUP00000024621	799 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000018863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000018863's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000018863	SF3A1	100	92.040	ENSG00000099995	SF3A1	96	91.969	Homo_sapiens
ENSSPUG00000018863	SF3A1	100	83.458	ENSAPOG00000020465	sf3a1	97	84.156	Acanthochromis_polyacanthus
ENSSPUG00000018863	SF3A1	97	92.298	ENSAMEG00000007737	SF3A1	96	91.839	Ailuropoda_melanoleuca
ENSSPUG00000018863	SF3A1	100	82.192	ENSACIG00000020672	sf3a1	97	84.026	Amphilophus_citrinellus
ENSSPUG00000018863	SF3A1	100	83.024	ENSAOCG00000003060	sf3a1	97	84.286	Amphiprion_ocellaris
ENSSPUG00000018863	SF3A1	100	83.147	ENSAPEG00000010735	sf3a1	97	84.286	Amphiprion_percula
ENSSPUG00000018863	SF3A1	97	84.615	ENSATEG00000021201	sf3a1	96	83.636	Anabas_testudineus
ENSSPUG00000018863	SF3A1	96	94.510	ENSAPLG00000009057	SF3A1	98	93.515	Anas_platyrhynchos
ENSSPUG00000018863	SF3A1	100	87.531	ENSACAG00000009415	SF3A1	100	87.897	Anolis_carolinensis
ENSSPUG00000018863	SF3A1	100	91.542	ENSANAG00000032045	SF3A1	96	91.969	Aotus_nancymaae
ENSSPUG00000018863	SF3A1	100	82.522	ENSACLG00000012622	sf3a1	97	85.026	Astatotilapia_calliptera
ENSSPUG00000018863	SF3A1	99	81.132	ENSAMXG00000005382	sf3a1	97	83.766	Astyanax_mexicanus
ENSSPUG00000018863	SF3A1	100	91.791	ENSBTAG00000003390	SF3A1	96	92.098	Bos_taurus
ENSSPUG00000018863	SF3A1	82	45.055	WBGene00004188	prp-21	88	45.312	Caenorhabditis_elegans
ENSSPUG00000018863	SF3A1	100	91.667	ENSCJAG00000010370	SF3A1	96	92.098	Callithrix_jacchus
ENSSPUG00000018863	SF3A1	100	91.418	ENSCAFG00000012559	SF3A1	96	91.710	Canis_familiaris
ENSSPUG00000018863	SF3A1	100	91.418	ENSCAFG00020000838	SF3A1	96	91.710	Canis_lupus_dingo
ENSSPUG00000018863	SF3A1	100	91.667	ENSCHIG00000018642	SF3A1	96	91.969	Capra_hircus
ENSSPUG00000018863	SF3A1	100	91.542	ENSTSYG00000004739	SF3A1	96	91.969	Carlito_syrichta
ENSSPUG00000018863	SF3A1	95	76.278	ENSCAPG00000015414	SF3A1	97	75.766	Cavia_aperea
ENSSPUG00000018863	SF3A1	100	92.164	ENSCPOG00000014589	SF3A1	96	92.228	Cavia_porcellus
ENSSPUG00000018863	SF3A1	100	91.542	ENSCCAG00000032006	SF3A1	96	91.969	Cebus_capucinus
ENSSPUG00000018863	SF3A1	100	91.791	ENSCATG00000029241	SF3A1	96	92.228	Cercocebus_atys
ENSSPUG00000018863	SF3A1	100	91.542	ENSCLAG00000006508	SF3A1	96	91.969	Chinchilla_lanigera
ENSSPUG00000018863	SF3A1	100	91.667	ENSCSAG00000009470	SF3A1	96	92.098	Chlorocebus_sabaeus
ENSSPUG00000018863	SF3A1	58	96.190	ENSCHOG00000005201	SF3A1	65	96.190	Choloepus_hoffmanni
ENSSPUG00000018863	SF3A1	100	91.740	ENSCPBG00000007595	SF3A1	100	92.240	Chrysemys_picta_bellii
ENSSPUG00000018863	SF3A1	87	66.909	ENSCSAVG00000005608	-	91	65.812	Ciona_savignyi
ENSSPUG00000018863	SF3A1	100	91.667	ENSCANG00000033564	SF3A1	96	92.098	Colobus_angolensis_palliatus
ENSSPUG00000018863	SF3A1	96	92.996	ENSCGRG00001008933	Sf3a1	96	91.839	Cricetulus_griseus_chok1gshd
ENSSPUG00000018863	SF3A1	96	92.996	ENSCGRG00000006127	Sf3a1	96	91.839	Cricetulus_griseus_crigri
ENSSPUG00000018863	SF3A1	97	81.830	ENSCSEG00000010792	sf3a1	96	83.117	Cynoglossus_semilaevis
ENSSPUG00000018863	SF3A1	100	82.565	ENSCVAG00000004560	sf3a1	96	81.795	Cyprinodon_variegatus
ENSSPUG00000018863	SF3A1	100	83.000	ENSDARG00000041887	sf3a1	97	84.485	Danio_rerio
ENSSPUG00000018863	SF3A1	98	92.239	ENSDNOG00000010629	SF3A1	96	91.731	Dasypus_novemcinctus
ENSSPUG00000018863	SF3A1	100	91.915	ENSDORG00000005613	Sf3a1	96	91.969	Dipodomys_ordii
ENSSPUG00000018863	SF3A1	80	61.131	FBgn0266917	Sf3a1	83	61.410	Drosophila_melanogaster
ENSSPUG00000018863	SF3A1	85	92.478	ENSETEG00000017194	SF3A1	95	91.003	Echinops_telfairi
ENSSPUG00000018863	SF3A1	100	64.947	ENSEBUG00000001285	sf3a1	95	66.791	Eptatretus_burgeri
ENSSPUG00000018863	SF3A1	100	91.667	ENSEASG00005010254	SF3A1	96	92.098	Equus_asinus_asinus
ENSSPUG00000018863	SF3A1	100	91.667	ENSECAG00000023962	SF3A1	96	92.098	Equus_caballus
ENSSPUG00000018863	SF3A1	72	93.443	ENSEEUG00000003159	SF3A1	79	93.443	Erinaceus_europaeus
ENSSPUG00000018863	SF3A1	100	81.390	ENSELUG00000022578	sf3a1	97	81.395	Esox_lucius
ENSSPUG00000018863	SF3A1	100	91.667	ENSFCAG00000011932	SF3A1	96	91.969	Felis_catus
ENSSPUG00000018863	SF3A1	96	92.801	ENSFALG00000006944	SF3A1	96	92.727	Ficedula_albicollis
ENSSPUG00000018863	SF3A1	100	91.667	ENSFDAG00000009560	SF3A1	96	92.098	Fukomys_damarensis
ENSSPUG00000018863	SF3A1	100	83.313	ENSFHEG00000010866	sf3a1	96	83.636	Fundulus_heteroclitus
ENSSPUG00000018863	SF3A1	100	80.100	ENSGMOG00000016024	sf3a1	97	80.965	Gadus_morhua
ENSSPUG00000018863	SF3A1	96	94.503	ENSGALG00000007937	SF3A1	96	93.506	Gallus_gallus
ENSSPUG00000018863	SF3A1	100	82.836	ENSGAFG00000009111	sf3a1	96	82.835	Gambusia_affinis
ENSSPUG00000018863	SF3A1	100	81.750	ENSGACG00000011893	sf3a1	96	82.138	Gasterosteus_aculeatus
ENSSPUG00000018863	SF3A1	96	91.514	ENSGAGG00000000762	SF3A1	99	92.037	Gopherus_agassizii
ENSSPUG00000018863	SF3A1	100	92.040	ENSGGOG00000012631	SF3A1	96	91.969	Gorilla_gorilla
ENSSPUG00000018863	SF3A1	100	82.522	ENSHBUG00000015795	sf3a1	97	85.026	Haplochromis_burtoni
ENSSPUG00000018863	SF3A1	100	91.667	ENSHGLG00000007907	SF3A1	96	92.098	Heterocephalus_glaber_female
ENSSPUG00000018863	SF3A1	100	91.667	ENSHGLG00100013799	SF3A1	96	92.098	Heterocephalus_glaber_male
ENSSPUG00000018863	SF3A1	100	80.299	ENSHCOG00000015423	sf3a1	97	81.014	Hippocampus_comes
ENSSPUG00000018863	SF3A1	97	80.359	ENSIPUG00000002470	sf3a1	97	81.795	Ictalurus_punctatus
ENSSPUG00000018863	SF3A1	100	91.791	ENSSTOG00000013892	SF3A1	96	92.228	Ictidomys_tridecemlineatus
ENSSPUG00000018863	SF3A1	97	92.848	ENSJJAG00000022566	Sf3a1	96	92.228	Jaculus_jaculus
ENSSPUG00000018863	SF3A1	100	82.565	ENSKMAG00000002400	sf3a1	97	83.896	Kryptolebias_marmoratus
ENSSPUG00000018863	SF3A1	100	82.419	ENSLBEG00000022974	sf3a1	97	83.355	Labrus_bergylta
ENSSPUG00000018863	SF3A1	100	84.558	ENSLACG00000003565	SF3A1	96	86.364	Latimeria_chalumnae
ENSSPUG00000018863	SF3A1	100	83.975	ENSLOCG00000008251	sf3a1	96	85.584	Lepisosteus_oculatus
ENSSPUG00000018863	SF3A1	99	58.157	ENSLAFG00000026032	-	96	58.131	Loxodonta_africana
ENSSPUG00000018863	SF3A1	100	91.418	ENSLAFG00000000448	SF3A1	96	91.969	Loxodonta_africana
ENSSPUG00000018863	SF3A1	100	91.542	ENSMFAG00000031979	SF3A1	96	91.969	Macaca_fascicularis
ENSSPUG00000018863	SF3A1	100	91.542	ENSMMUG00000005547	SF3A1	96	91.969	Macaca_mulatta
ENSSPUG00000018863	SF3A1	100	91.667	ENSMNEG00000037229	SF3A1	96	92.098	Macaca_nemestrina
ENSSPUG00000018863	SF3A1	100	91.667	ENSMLEG00000041908	SF3A1	96	92.098	Mandrillus_leucophaeus
ENSSPUG00000018863	SF3A1	97	85.438	ENSMAMG00000006460	sf3a1	95	84.286	Mastacembelus_armatus
ENSSPUG00000018863	SF3A1	100	82.522	ENSMZEG00005009633	sf3a1	97	85.026	Maylandia_zebra
ENSSPUG00000018863	SF3A1	96	94.503	ENSMGAG00000001330	SF3A1	99	93.506	Meleagris_gallopavo
ENSSPUG00000018863	SF3A1	97	86.172	ENSMAUG00000020317	Sf3a1	94	88.291	Mesocricetus_auratus
ENSSPUG00000018863	SF3A1	100	91.542	ENSMICG00000010038	SF3A1	96	91.969	Microcebus_murinus
ENSSPUG00000018863	SF3A1	100	91.667	ENSMOCG00000008438	Sf3a1	96	91.969	Microtus_ochrogaster
ENSSPUG00000018863	SF3A1	100	81.047	ENSMMOG00000015588	sf3a1	96	81.014	Mola_mola
ENSSPUG00000018863	SF3A1	100	92.394	ENSMODG00000009270	SF3A1	96	93.126	Monodelphis_domestica
ENSSPUG00000018863	SF3A1	100	83.541	ENSMALG00000000148	sf3a1	99	83.356	Monopterus_albus
ENSSPUG00000018863	SF3A1	100	91.294	MGP_CAROLIEiJ_G0016029	Sf3a1	96	91.958	Mus_caroli
ENSSPUG00000018863	SF3A1	100	91.294	ENSMUSG00000002129	Sf3a1	96	91.958	Mus_musculus
ENSSPUG00000018863	SF3A1	100	91.169	MGP_PahariEiJ_G0016862	Sf3a1	96	91.829	Mus_pahari
ENSSPUG00000018863	SF3A1	100	91.294	MGP_SPRETEiJ_G0016870	Sf3a1	96	91.958	Mus_spretus
ENSSPUG00000018863	SF3A1	100	91.169	ENSMPUG00000013144	SF3A1	96	91.580	Mustela_putorius_furo
ENSSPUG00000018863	SF3A1	100	91.667	ENSMLUG00000002139	SF3A1	96	92.098	Myotis_lucifugus
ENSSPUG00000018863	SF3A1	100	91.791	ENSNGAG00000016977	Sf3a1	96	91.839	Nannospalax_galili
ENSSPUG00000018863	SF3A1	100	82.647	ENSNBRG00000016642	sf3a1	96	85.026	Neolamprologus_brichardi
ENSSPUG00000018863	SF3A1	100	91.667	ENSNLEG00000003686	SF3A1	96	92.098	Nomascus_leucogenys
ENSSPUG00000018863	SF3A1	93	84.913	ENSMEUG00000008741	SF3A1	96	84.282	Notamacropus_eugenii
ENSSPUG00000018863	SF3A1	97	93.161	ENSOPRG00000016636	SF3A1	96	92.228	Ochotona_princeps
ENSSPUG00000018863	SF3A1	100	92.030	ENSODEG00000002571	SF3A1	96	92.358	Octodon_degus
ENSSPUG00000018863	SF3A1	100	82.419	ENSONIG00000010848	sf3a1	97	84.395	Oreochromis_niloticus
ENSSPUG00000018863	SF3A1	98	92.219	ENSOCUG00000007633	SF3A1	96	91.839	Oryctolagus_cuniculus
ENSSPUG00000018863	SF3A1	96	82.445	ENSORLG00000013050	sf3a1	96	84.490	Oryzias_latipes
ENSSPUG00000018863	SF3A1	99	81.179	ENSORLG00020003236	sf3a1	93	83.378	Oryzias_latipes_hni
ENSSPUG00000018863	SF3A1	100	82.918	ENSORLG00015017411	sf3a1	97	84.766	Oryzias_latipes_hsok
ENSSPUG00000018863	SF3A1	100	83.146	ENSOMEG00000013362	sf3a1	97	84.375	Oryzias_melastigma
ENSSPUG00000018863	SF3A1	100	91.542	ENSOGAG00000012931	SF3A1	96	91.969	Otolemur_garnettii
ENSSPUG00000018863	SF3A1	100	89.677	ENSOARG00000006849	SF3A1	96	90.285	Ovis_aries
ENSSPUG00000018863	SF3A1	100	91.045	ENSPPAG00000041790	SF3A1	96	90.039	Pan_paniscus
ENSSPUG00000018863	SF3A1	100	91.667	ENSPPRG00000004391	SF3A1	96	91.969	Panthera_pardus
ENSSPUG00000018863	SF3A1	97	92.337	ENSPTIG00000000844	SF3A1	99	91.839	Panthera_tigris_altaica
ENSSPUG00000018863	SF3A1	100	92.040	ENSPTRG00000014240	SF3A1	96	91.969	Pan_troglodytes
ENSSPUG00000018863	SF3A1	100	91.667	ENSPANG00000020772	SF3A1	96	92.098	Papio_anubis
ENSSPUG00000018863	SF3A1	82	95.604	ENSPSIG00000012803	SF3A1	94	96.538	Pelodiscus_sinensis
ENSSPUG00000018863	SF3A1	97	82.817	ENSPMGG00000023096	sf3a1	99	83.572	Periophthalmus_magnuspinnatus
ENSSPUG00000018863	SF3A1	96	93.126	ENSPEMG00000009494	Sf3a1	96	91.969	Peromyscus_maniculatus_bairdii
ENSSPUG00000018863	SF3A1	68	78.611	ENSPMAG00000007139	-	87	82.101	Petromyzon_marinus
ENSSPUG00000018863	SF3A1	100	92.394	ENSPCIG00000022692	SF3A1	96	92.866	Phascolarctos_cinereus
ENSSPUG00000018863	SF3A1	100	74.439	ENSPFOG00000016768	sf3a1	93	76.644	Poecilia_formosa
ENSSPUG00000018863	SF3A1	100	82.960	ENSPLAG00000017268	sf3a1	96	83.117	Poecilia_latipinna
ENSSPUG00000018863	SF3A1	84	84.296	ENSPMEG00000019811	sf3a1	98	82.641	Poecilia_mexicana
ENSSPUG00000018863	SF3A1	100	83.333	ENSPREG00000010347	sf3a1	96	83.636	Poecilia_reticulata
ENSSPUG00000018863	SF3A1	100	91.667	ENSPPYG00000011707	SF3A1	96	92.098	Pongo_abelii
ENSSPUG00000018863	SF3A1	58	96.266	ENSPCAG00000003266	SF3A1	57	96.266	Procavia_capensis
ENSSPUG00000018863	SF3A1	100	91.542	ENSPCOG00000026630	SF3A1	96	91.969	Propithecus_coquereli
ENSSPUG00000018863	SF3A1	100	88.060	ENSPVAG00000017719	SF3A1	94	90.873	Pteropus_vampyrus
ENSSPUG00000018863	SF3A1	100	82.522	ENSPNYG00000018706	sf3a1	97	85.026	Pundamilia_nyererei
ENSSPUG00000018863	SF3A1	99	81.258	ENSPNAG00000003721	sf3a1	97	83.377	Pygocentrus_nattereri
ENSSPUG00000018863	SF3A1	98	92.347	ENSRNOG00000005218	Sf3a1	96	91.969	Rattus_norvegicus
ENSSPUG00000018863	SF3A1	100	91.667	ENSRBIG00000032167	SF3A1	96	92.098	Rhinopithecus_bieti
ENSSPUG00000018863	SF3A1	100	91.667	ENSRROG00000044908	SF3A1	96	92.098	Rhinopithecus_roxellana
ENSSPUG00000018863	SF3A1	96	90.065	ENSSBOG00000021960	SF3A1	98	92.136	Saimiri_boliviensis_boliviensis
ENSSPUG00000018863	SF3A1	98	90.921	ENSSHAG00000003666	SF3A1	96	90.791	Sarcophilus_harrisii
ENSSPUG00000018863	SF3A1	100	81.965	ENSSFOG00015004579	sf3a1	96	85.084	Scleropages_formosus
ENSSPUG00000018863	SF3A1	100	80.175	ENSSMAG00000004275	sf3a1	97	82.055	Scophthalmus_maximus
ENSSPUG00000018863	SF3A1	100	82.544	ENSSDUG00000022219	sf3a1	97	83.615	Seriola_dumerili
ENSSPUG00000018863	SF3A1	100	82.544	ENSSLDG00000012642	sf3a1	97	83.615	Seriola_lalandi_dorsalis
ENSSPUG00000018863	SF3A1	97	89.911	ENSSARG00000005960	SF3A1	99	89.119	Sorex_araneus
ENSSPUG00000018863	SF3A1	100	84.558	ENSSPAG00000011856	sf3a1	97	84.395	Stegastes_partitus
ENSSPUG00000018863	SF3A1	100	91.542	ENSSSCG00000010002	SF3A1	96	91.839	Sus_scrofa
ENSSPUG00000018863	SF3A1	96	94.648	ENSTGUG00000010547	SF3A1	99	93.653	Taeniopygia_guttata
ENSSPUG00000018863	SF3A1	78	82.830	ENSTRUG00000006118	sf3a1	97	81.274	Takifugu_rubripes
ENSSPUG00000018863	SF3A1	62	85.448	ENSTNIG00000005713	sf3a1	89	85.075	Tetraodon_nigroviridis
ENSSPUG00000018863	SF3A1	100	85.075	ENSTBEG00000012771	SF3A1	96	85.363	Tupaia_belangeri
ENSSPUG00000018863	SF3A1	100	91.056	ENSTTRG00000001535	SF3A1	96	91.332	Tursiops_truncatus
ENSSPUG00000018863	SF3A1	99	90.602	ENSUAMG00000006750	SF3A1	95	90.992	Ursus_americanus
ENSSPUG00000018863	SF3A1	98	91.975	ENSUMAG00000016665	SF3A1	97	91.710	Ursus_maritimus
ENSSPUG00000018863	SF3A1	100	91.418	ENSVVUG00000003075	SF3A1	96	91.710	Vulpes_vulpes
ENSSPUG00000018863	SF3A1	100	82.484	ENSXETG00000016144	sf3a1	96	85.325	Xenopus_tropicalis
ENSSPUG00000018863	SF3A1	100	82.338	ENSXCOG00000015653	sf3a1	96	82.315	Xiphophorus_couchianus
ENSSPUG00000018863	SF3A1	100	82.463	ENSXMAG00000002753	sf3a1	96	82.445	Xiphophorus_maculatus