EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000019124 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 2187 bases
Position: chrQEPC01014024.1:1025775-1027961
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000024937	RRM_1	PF00076.22	2.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000026622	-	270	-	ENSSPUP00000024937	89 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000019124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000019124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000019124	-	76	30.263	ENSSPUG00000000444	RBM3	60	30.769
ENSSPUG00000019124	-	99	73.864	ENSSPUG00000004967	SRSF6	64	73.864
ENSSPUG00000019124	-	69	35.484	ENSSPUG00000014047	-	73	35.484
ENSSPUG00000019124	-	88	34.615	ENSSPUG00000005889	-	52	34.615
ENSSPUG00000019124	-	63	32.812	ENSSPUG00000000450	-	79	32.812
ENSSPUG00000019124	-	76	35.526	ENSSPUG00000006459	CIRBP	53	35.165
ENSSPUG00000019124	-	63	40.351	ENSSPUG00000011545	-	54	40.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000019124	-	92	92.683	ENSG00000116350	SRSF4	73	84.848	Homo_sapiens
ENSSPUG00000019124	-	85	85.526	ENSACIG00000018649	srsf4	70	84.337	Amphilophus_citrinellus
ENSSPUG00000019124	-	80	84.507	ENSAPEG00000020870	-	67	79.545	Amphiprion_percula
ENSSPUG00000019124	-	85	86.842	ENSACLG00000003395	srsf4	69	84.337	Astatotilapia_calliptera
ENSSPUG00000019124	-	97	68.085	ENSAMXG00000034811	srsf4	75	78.947	Astyanax_mexicanus
ENSSPUG00000019124	-	85	85.526	ENSCSEG00000010058	srsf4	52	79.518	Cynoglossus_semilaevis
ENSSPUG00000019124	-	85	81.579	ENSDARG00000105293	srsf4	72	81.579	Danio_rerio
ENSSPUG00000019124	-	85	64.474	FBgn0004587	B52	56	64.474	Drosophila_melanogaster
ENSSPUG00000019124	-	85	69.737	ENSELUG00000017551	srsf4	58	69.880	Esox_lucius
ENSSPUG00000019124	-	98	79.310	ENSFHEG00000007472	srsf4	92	79.310	Fundulus_heteroclitus
ENSSPUG00000019124	-	85	86.842	ENSHBUG00000016897	-	75	84.337	Haplochromis_burtoni
ENSSPUG00000019124	-	82	84.932	ENSLBEG00000017163	-	77	83.133	Labrus_bergylta
ENSSPUG00000019124	-	85	86.842	ENSMZEG00005026275	srsf4	69	84.337	Maylandia_zebra
ENSSPUG00000019124	-	85	86.842	ENSMZEG00005025078	-	75	84.337	Maylandia_zebra
ENSSPUG00000019124	-	91	71.605	ENSMALG00000010062	-	87	71.605	Monopterus_albus
ENSSPUG00000019124	-	85	86.842	ENSNBRG00000014840	-	78	84.337	Neolamprologus_brichardi
ENSSPUG00000019124	-	80	84.507	ENSORLG00000028783	-	77	81.176	Oryzias_latipes
ENSSPUG00000019124	-	85	84.211	ENSPMGG00000013436	srsf4	62	80.723	Periophthalmus_magnuspinnatus
ENSSPUG00000019124	-	92	92.683	ENSPCOG00000027341	SRSF4	51	53.488	Propithecus_coquereli
ENSSPUG00000019124	-	92	84.146	ENSSFOG00015020292	srsf4	84	76.667	Scleropages_formosus
ENSSPUG00000019124	-	100	78.652	ENSSPAG00000014538	srsf4	76	81.395	Stegastes_partitus
ENSSPUG00000019124	-	97	80.233	ENSXCOG00000018826	srsf4	64	80.233	Xiphophorus_couchianus
ENSSPUG00000019124	-	96	81.176	ENSXMAG00000021549	-	71	81.176	Xiphophorus_maculatus