EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000019338 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 39663 bases
Position: chrQEPC01015418.1:1366125-1405787
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000025248	CPSF_A	PF03178.15	1.5e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000026948	DDB1-201	3420	-	ENSSPUP00000025248	1139 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000019338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000019338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000019338	DDB1	100	97.807	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSSPUG00000019338	DDB1	98	90.754	ENSAPOG00000005036	ddb1	99	90.816	Acanthochromis_polyacanthus
ENSSPUG00000019338	DDB1	100	97.895	ENSAMEG00000016518	DDB1	100	97.895	Ailuropoda_melanoleuca
ENSSPUG00000019338	DDB1	86	91.122	ENSACIG00000020624	ddb1	99	91.122	Amphilophus_citrinellus
ENSSPUG00000019338	DDB1	100	90.965	ENSAOCG00000003066	ddb1	100	90.965	Amphiprion_ocellaris
ENSSPUG00000019338	DDB1	100	91.053	ENSAPEG00000000092	ddb1	100	91.053	Amphiprion_percula
ENSSPUG00000019338	DDB1	94	91.070	ENSATEG00000020571	ddb1	97	91.070	Anabas_testudineus
ENSSPUG00000019338	DDB1	98	97.422	ENSAPLG00000007174	DDB1	99	97.422	Anas_platyrhynchos
ENSSPUG00000019338	DDB1	100	97.719	ENSACAG00000017758	DDB1	100	97.719	Anolis_carolinensis
ENSSPUG00000019338	DDB1	100	97.807	ENSANAG00000021878	DDB1	100	97.807	Aotus_nancymaae
ENSSPUG00000019338	DDB1	100	91.140	ENSACLG00000012401	ddb1	100	91.140	Astatotilapia_calliptera
ENSSPUG00000019338	DDB1	100	97.895	ENSBTAG00000021569	DDB1	93	97.895	Bos_taurus
ENSSPUG00000019338	DDB1	100	36.801	WBGene00010890	ddb-1	100	36.801	Caenorhabditis_elegans
ENSSPUG00000019338	DDB1	100	97.807	ENSCJAG00000019319	DDB1	100	97.807	Callithrix_jacchus
ENSSPUG00000019338	DDB1	100	97.895	ENSCAFG00000016264	DDB1	100	97.895	Canis_familiaris
ENSSPUG00000019338	DDB1	94	97.767	ENSCAFG00020012722	DDB1	99	97.767	Canis_lupus_dingo
ENSSPUG00000019338	DDB1	100	97.895	ENSCHIG00000014969	DDB1	100	97.895	Capra_hircus
ENSSPUG00000019338	DDB1	100	97.368	ENSTSYG00000008027	DDB1	100	97.368	Carlito_syrichta
ENSSPUG00000019338	DDB1	98	97.140	ENSCAPG00000010786	DDB1	100	97.140	Cavia_aperea
ENSSPUG00000019338	DDB1	100	97.193	ENSCPOG00000009956	DDB1	100	97.193	Cavia_porcellus
ENSSPUG00000019338	DDB1	100	97.807	ENSCCAG00000035883	DDB1	100	97.807	Cebus_capucinus
ENSSPUG00000019338	DDB1	100	95.312	ENSCATG00000044495	DDB1	100	95.312	Cercocebus_atys
ENSSPUG00000019338	DDB1	100	97.281	ENSCLAG00000004126	DDB1	100	97.281	Chinchilla_lanigera
ENSSPUG00000019338	DDB1	100	97.807	ENSCSAG00000006392	DDB1	100	97.807	Chlorocebus_sabaeus
ENSSPUG00000019338	DDB1	88	91.288	ENSCHOG00000011377	DDB1	90	91.288	Choloepus_hoffmanni
ENSSPUG00000019338	DDB1	100	98.947	ENSCPBG00000017728	DDB1	100	98.947	Chrysemys_picta_bellii
ENSSPUG00000019338	DDB1	100	61.979	ENSCING00000007437	-	100	61.806	Ciona_intestinalis
ENSSPUG00000019338	DDB1	94	60.681	ENSCSAVG00000004783	-	100	60.681	Ciona_savignyi
ENSSPUG00000019338	DDB1	100	97.807	ENSCANG00000019948	DDB1	100	97.807	Colobus_angolensis_palliatus
ENSSPUG00000019338	DDB1	100	97.895	ENSCGRG00001016599	Ddb1	100	97.895	Cricetulus_griseus_chok1gshd
ENSSPUG00000019338	DDB1	100	97.895	ENSCGRG00000013427	Ddb1	100	97.895	Cricetulus_griseus_crigri
ENSSPUG00000019338	DDB1	93	90.763	ENSCSEG00000012499	ddb1	99	89.170	Cynoglossus_semilaevis
ENSSPUG00000019338	DDB1	94	90.867	ENSCVAG00000019531	ddb1	99	90.867	Cyprinodon_variegatus
ENSSPUG00000019338	DDB1	100	88.354	ENSDARG00000074431	ddb1	100	88.472	Danio_rerio
ENSSPUG00000019338	DDB1	94	97.488	ENSDNOG00000014884	DDB1	97	97.488	Dasypus_novemcinctus
ENSSPUG00000019338	DDB1	84	99.548	ENSDORG00000000127	Ddb1	100	99.548	Dipodomys_ordii
ENSSPUG00000019338	DDB1	100	61.048	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
ENSSPUG00000019338	DDB1	71	99.606	ENSETEG00000001053	-	71	99.606	Echinops_telfairi
ENSSPUG00000019338	DDB1	78	84.589	ENSEBUG00000014593	ddb1	97	84.589	Eptatretus_burgeri
ENSSPUG00000019338	DDB1	100	97.895	ENSEASG00005008184	DDB1	100	97.895	Equus_asinus_asinus
ENSSPUG00000019338	DDB1	100	97.982	ENSECAG00000012136	DDB1	100	97.982	Equus_caballus
ENSSPUG00000019338	DDB1	85	95.118	ENSEEUG00000003194	DDB1	85	95.118	Erinaceus_europaeus
ENSSPUG00000019338	DDB1	100	90.789	ENSELUG00000023868	ddb1	100	90.789	Esox_lucius
ENSSPUG00000019338	DDB1	100	97.895	ENSFCAG00000029716	DDB1	100	97.895	Felis_catus
ENSSPUG00000019338	DDB1	100	97.550	ENSFALG00000011981	DDB1	100	97.550	Ficedula_albicollis
ENSSPUG00000019338	DDB1	100	97.368	ENSFDAG00000005128	DDB1	100	97.368	Fukomys_damarensis
ENSSPUG00000019338	DDB1	90	91.765	ENSFHEG00000022133	ddb1	98	91.765	Fundulus_heteroclitus
ENSSPUG00000019338	DDB1	79	94.314	ENSGMOG00000019386	ddb1	94	94.314	Gadus_morhua
ENSSPUG00000019338	DDB1	100	98.070	ENSGALG00000042333	DDB1	100	98.070	Gallus_gallus
ENSSPUG00000019338	DDB1	94	90.587	ENSGAFG00000013142	ddb1	99	90.587	Gambusia_affinis
ENSSPUG00000019338	DDB1	96	90.009	ENSGACG00000017182	ddb1	100	90.009	Gasterosteus_aculeatus
ENSSPUG00000019338	DDB1	95	99.077	ENSGAGG00000014124	DDB1	100	99.077	Gopherus_agassizii
ENSSPUG00000019338	DDB1	100	97.807	ENSGGOG00000004052	DDB1	100	97.807	Gorilla_gorilla
ENSSPUG00000019338	DDB1	100	91.140	ENSHBUG00000008873	ddb1	100	91.140	Haplochromis_burtoni
ENSSPUG00000019338	DDB1	100	97.368	ENSHGLG00000018430	DDB1	100	97.368	Heterocephalus_glaber_female
ENSSPUG00000019338	DDB1	100	96.316	ENSHGLG00100014475	DDB1	100	96.316	Heterocephalus_glaber_male
ENSSPUG00000019338	DDB1	94	90.335	ENSHCOG00000018670	ddb1	98	90.335	Hippocampus_comes
ENSSPUG00000019338	DDB1	100	90.439	ENSIPUG00000005612	DDB1	100	90.439	Ictalurus_punctatus
ENSSPUG00000019338	DDB1	100	97.807	ENSSTOG00000007552	DDB1	100	97.807	Ictidomys_tridecemlineatus
ENSSPUG00000019338	DDB1	100	97.807	ENSJJAG00000017769	Ddb1	100	97.807	Jaculus_jaculus
ENSSPUG00000019338	DDB1	94	90.680	ENSKMAG00000002315	ddb1	99	90.680	Kryptolebias_marmoratus
ENSSPUG00000019338	DDB1	85	90.777	ENSLBEG00000017065	ddb1	99	90.777	Labrus_bergylta
ENSSPUG00000019338	DDB1	100	93.695	ENSLACG00000017611	DDB1	100	93.695	Latimeria_chalumnae
ENSSPUG00000019338	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSSPUG00000019338	DDB1	100	97.632	ENSLAFG00000011513	DDB1	100	97.632	Loxodonta_africana
ENSSPUG00000019338	DDB1	100	97.807	ENSMFAG00000042035	DDB1	100	97.807	Macaca_fascicularis
ENSSPUG00000019338	DDB1	99	97.878	ENSMMUG00000002691	DDB1	99	97.878	Macaca_mulatta
ENSSPUG00000019338	DDB1	100	97.807	ENSMNEG00000031559	DDB1	100	97.807	Macaca_nemestrina
ENSSPUG00000019338	DDB1	100	97.807	ENSMLEG00000044136	DDB1	100	97.807	Mandrillus_leucophaeus
ENSSPUG00000019338	DDB1	100	91.228	ENSMAMG00000014372	ddb1	100	91.228	Mastacembelus_armatus
ENSSPUG00000019338	DDB1	100	91.053	ENSMZEG00005013835	ddb1	100	91.053	Maylandia_zebra
ENSSPUG00000019338	DDB1	94	97.486	ENSMGAG00000004990	DDB1	100	97.486	Meleagris_gallopavo
ENSSPUG00000019338	DDB1	100	97.895	ENSMAUG00000012926	Ddb1	100	97.895	Mesocricetus_auratus
ENSSPUG00000019338	DDB1	100	97.807	ENSMICG00000013703	DDB1	100	97.807	Microcebus_murinus
ENSSPUG00000019338	DDB1	100	97.632	ENSMOCG00000020499	Ddb1	100	97.632	Microtus_ochrogaster
ENSSPUG00000019338	DDB1	86	90.918	ENSMMOG00000001758	ddb1	99	90.918	Mola_mola
ENSSPUG00000019338	DDB1	100	88.322	ENSMODG00000020353	DDB1	100	88.322	Monodelphis_domestica
ENSSPUG00000019338	DDB1	100	91.140	ENSMALG00000014071	ddb1	100	91.140	Monopterus_albus
ENSSPUG00000019338	DDB1	100	97.895	MGP_CAROLIEiJ_G0022695	Ddb1	100	97.895	Mus_caroli
ENSSPUG00000019338	DDB1	100	97.807	ENSMUSG00000024740	Ddb1	100	97.807	Mus_musculus
ENSSPUG00000019338	DDB1	100	97.895	MGP_PahariEiJ_G0014189	Ddb1	100	97.895	Mus_pahari
ENSSPUG00000019338	DDB1	100	97.895	MGP_SPRETEiJ_G0023609	Ddb1	100	97.895	Mus_spretus
ENSSPUG00000019338	DDB1	100	94.649	ENSMPUG00000014200	DDB1	100	94.649	Mustela_putorius_furo
ENSSPUG00000019338	DDB1	100	97.632	ENSMLUG00000013232	DDB1	100	97.632	Myotis_lucifugus
ENSSPUG00000019338	DDB1	100	97.544	ENSNGAG00000009384	Ddb1	100	97.544	Nannospalax_galili
ENSSPUG00000019338	DDB1	100	91.228	ENSNBRG00000019581	ddb1	100	91.228	Neolamprologus_brichardi
ENSSPUG00000019338	DDB1	100	94.705	ENSNLEG00000002022	DDB1	100	94.705	Nomascus_leucogenys
ENSSPUG00000019338	DDB1	90	97.887	ENSMEUG00000001099	DDB1	92	97.887	Notamacropus_eugenii
ENSSPUG00000019338	DDB1	90	89.234	ENSOPRG00000008254	DDB1	90	89.234	Ochotona_princeps
ENSSPUG00000019338	DDB1	100	97.193	ENSODEG00000002419	DDB1	100	97.193	Octodon_degus
ENSSPUG00000019338	DDB1	100	91.140	ENSONIG00000005804	ddb1	100	91.140	Oreochromis_niloticus
ENSSPUG00000019338	DDB1	91	97.771	ENSOANG00000004897	DDB1	100	97.771	Ornithorhynchus_anatinus
ENSSPUG00000019338	DDB1	100	97.807	ENSOCUG00000001667	DDB1	100	97.807	Oryctolagus_cuniculus
ENSSPUG00000019338	DDB1	96	89.276	ENSORLG00000001399	ddb1	98	90.490	Oryzias_latipes
ENSSPUG00000019338	DDB1	96	89.184	ENSORLG00020001277	ddb1	97	89.184	Oryzias_latipes_hni
ENSSPUG00000019338	DDB1	94	90.326	ENSORLG00015002080	ddb1	99	90.326	Oryzias_latipes_hsok
ENSSPUG00000019338	DDB1	96	89.152	ENSOMEG00000006181	ddb1	99	89.152	Oryzias_melastigma
ENSSPUG00000019338	DDB1	100	97.895	ENSOGAG00000016103	DDB1	100	97.895	Otolemur_garnettii
ENSSPUG00000019338	DDB1	99	98.041	ENSOARG00000011716	DDB1	98	98.041	Ovis_aries
ENSSPUG00000019338	DDB1	100	97.807	ENSPPAG00000035343	DDB1	100	97.807	Pan_paniscus
ENSSPUG00000019338	DDB1	100	97.895	ENSPPRG00000013300	DDB1	100	97.895	Panthera_pardus
ENSSPUG00000019338	DDB1	98	97.855	ENSPTIG00000006909	DDB1	98	97.855	Panthera_tigris_altaica
ENSSPUG00000019338	DDB1	100	97.807	ENSPTRG00000003737	DDB1	100	97.807	Pan_troglodytes
ENSSPUG00000019338	DDB1	100	97.807	ENSPANG00000000242	DDB1	100	97.807	Papio_anubis
ENSSPUG00000019338	DDB1	94	91.240	ENSPKIG00000019213	ddb1	94	91.240	Paramormyrops_kingsleyae
ENSSPUG00000019338	DDB1	98	98.310	ENSPSIG00000013275	DDB1	100	98.310	Pelodiscus_sinensis
ENSSPUG00000019338	DDB1	86	90.816	ENSPMGG00000021179	ddb1	99	90.816	Periophthalmus_magnuspinnatus
ENSSPUG00000019338	DDB1	100	97.895	ENSPEMG00000012241	Ddb1	100	97.895	Peromyscus_maniculatus_bairdii
ENSSPUG00000019338	DDB1	89	86.542	ENSPMAG00000008479	ddb1	100	86.542	Petromyzon_marinus
ENSSPUG00000019338	DDB1	100	98.070	ENSPCIG00000002643	DDB1	100	98.070	Phascolarctos_cinereus
ENSSPUG00000019338	DDB1	100	90.535	ENSPFOG00000002768	ddb1	100	90.535	Poecilia_formosa
ENSSPUG00000019338	DDB1	100	90.351	ENSPLAG00000017227	ddb1	100	90.351	Poecilia_latipinna
ENSSPUG00000019338	DDB1	100	90.351	ENSPMEG00000011398	ddb1	100	90.351	Poecilia_mexicana
ENSSPUG00000019338	DDB1	94	90.698	ENSPREG00000004440	ddb1	98	90.698	Poecilia_reticulata
ENSSPUG00000019338	DDB1	100	93.019	ENSPPYG00000003193	DDB1	100	93.019	Pongo_abelii
ENSSPUG00000019338	DDB1	85	96.866	ENSPCAG00000011040	DDB1	85	96.866	Procavia_capensis
ENSSPUG00000019338	DDB1	100	96.322	ENSPCOG00000015176	DDB1	100	96.322	Propithecus_coquereli
ENSSPUG00000019338	DDB1	100	97.719	ENSPVAG00000003847	DDB1	100	97.719	Pteropus_vampyrus
ENSSPUG00000019338	DDB1	94	91.146	ENSPNAG00000006635	ddb1	97	91.146	Pygocentrus_nattereri
ENSSPUG00000019338	DDB1	100	97.807	ENSRNOG00000020715	Ddb1	100	97.807	Rattus_norvegicus
ENSSPUG00000019338	DDB1	100	97.807	ENSRBIG00000033611	DDB1	100	97.807	Rhinopithecus_bieti
ENSSPUG00000019338	DDB1	100	97.807	ENSRROG00000041407	DDB1	100	97.807	Rhinopithecus_roxellana
ENSSPUG00000019338	DDB1	100	97.895	ENSSBOG00000019775	DDB1	100	97.895	Saimiri_boliviensis_boliviensis
ENSSPUG00000019338	DDB1	94	95.981	ENSSHAG00000011600	DDB1	100	95.981	Sarcophilus_harrisii
ENSSPUG00000019338	DDB1	94	91.357	ENSSFOG00015011151	ddb1	97	91.357	Scleropages_formosus
ENSSPUG00000019338	DDB1	100	90.789	ENSSMAG00000009495	ddb1	100	90.789	Scophthalmus_maximus
ENSSPUG00000019338	DDB1	100	91.053	ENSSDUG00000004642	ddb1	100	91.053	Seriola_dumerili
ENSSPUG00000019338	DDB1	100	91.053	ENSSLDG00000015804	ddb1	100	91.053	Seriola_lalandi_dorsalis
ENSSPUG00000019338	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSSPUG00000019338	DDB1	94	90.977	ENSSPAG00000009888	ddb1	99	90.977	Stegastes_partitus
ENSSPUG00000019338	DDB1	100	96.930	ENSSSCG00000013094	DDB1	100	96.930	Sus_scrofa
ENSSPUG00000019338	DDB1	100	97.719	ENSTGUG00000006414	DDB1	100	97.719	Taeniopygia_guttata
ENSSPUG00000019338	DDB1	94	89.655	ENSTRUG00000016682	ddb1	98	89.655	Takifugu_rubripes
ENSSPUG00000019338	DDB1	88	84.731	ENSTNIG00000009565	ddb1	99	84.731	Tetraodon_nigroviridis
ENSSPUG00000019338	DDB1	92	92.689	ENSTTRG00000011055	DDB1	94	92.689	Tursiops_truncatus
ENSSPUG00000019338	DDB1	94	97.767	ENSUAMG00000017793	DDB1	93	97.767	Ursus_americanus
ENSSPUG00000019338	DDB1	94	97.767	ENSUMAG00000011788	DDB1	98	97.767	Ursus_maritimus
ENSSPUG00000019338	DDB1	90	97.059	ENSVPAG00000007963	DDB1	92	97.059	Vicugna_pacos
ENSSPUG00000019338	DDB1	100	97.807	ENSVVUG00000004987	DDB1	100	97.807	Vulpes_vulpes
ENSSPUG00000019338	DDB1	100	92.657	ENSXETG00000008820	ddb1	100	92.657	Xenopus_tropicalis
ENSSPUG00000019338	DDB1	86	90.612	ENSXCOG00000013956	ddb1	99	90.612	Xiphophorus_couchianus
ENSSPUG00000019338	DDB1	94	90.587	ENSXMAG00000000022	ddb1	99	90.587	Xiphophorus_maculatus