EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000000007 (Gene tree)
Gene ID: 100521087
Gene Symbol: TRMU
Alias: FLJ10140|MTO2|TRMT
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 16270 bases
Position: chr5:3208118-3224387
Accession: 100521087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000000008	tRNA_Me_trans	PF03054.16	4.4e-140	1	1
ENSSSCP00000051915	tRNA_Me_trans	PF03054.16	7.4e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000057594	TRMU-202	1167	-	ENSSSCP00000051915	277 (aa)	-	A0A287B727
ENSSSCT00000000008	TRMU-201	1628	XM_021091373	ENSSSCP00000000008	421 (aa)	XP_020947032	F1SM74

Gene Model

Click here to download ENSSSCG00000000007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000007's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000007	TRMU	100	88.599	ENSG00000100416	TRMU	100	96.429	Homo_sapiens
ENSSSCG00000000007	TRMU	99	69.524	ENSAPOG00000014458	trmu	97	71.216	Acanthochromis_polyacanthus
ENSSSCG00000000007	TRMU	99	90.909	ENSAMEG00000003319	TRMU	97	91.872	Ailuropoda_melanoleuca
ENSSSCG00000000007	TRMU	96	68.148	ENSACIG00000002101	trmu	97	68.148	Amphilophus_citrinellus
ENSSSCG00000000007	TRMU	99	69.286	ENSAOCG00000013155	trmu	97	70.968	Amphiprion_ocellaris
ENSSSCG00000000007	TRMU	99	68.810	ENSAPEG00000013350	trmu	97	70.471	Amphiprion_percula
ENSSSCG00000000007	TRMU	96	69.458	ENSATEG00000007814	trmu	99	69.458	Anabas_testudineus
ENSSSCG00000000007	TRMU	89	77.394	ENSAPLG00000016380	TRMU	96	77.394	Anas_platyrhynchos
ENSSSCG00000000007	TRMU	96	78.412	ENSACAG00000007720	TRMU	97	78.412	Anolis_carolinensis
ENSSSCG00000000007	TRMU	97	89.706	ENSANAG00000038053	TRMU	97	89.706	Aotus_nancymaae
ENSSSCG00000000007	TRMU	96	70.223	ENSACLG00000005395	trmu	98	69.648	Astatotilapia_calliptera
ENSSSCG00000000007	TRMU	94	71.139	ENSAMXG00000005282	trmu	96	71.139	Astyanax_mexicanus
ENSSSCG00000000007	TRMU	99	89.448	ENSBTAG00000005595	TRMU	98	90.686	Bos_taurus
ENSSSCG00000000007	TRMU	90	39.018	WBGene00007114	mttu-1	98	39.018	Caenorhabditis_elegans
ENSSSCG00000000007	TRMU	100	88.599	ENSCJAG00000000198	TRMU	97	90.196	Callithrix_jacchus
ENSSSCG00000000007	TRMU	97	93.415	ENSCAFG00000000779	TRMU	96	93.627	Canis_familiaris
ENSSSCG00000000007	TRMU	97	93.415	ENSCAFG00020009184	TRMU	96	93.627	Canis_lupus_dingo
ENSSSCG00000000007	TRMU	99	90.453	ENSCHIG00000017074	TRMU	98	91.667	Capra_hircus
ENSSSCG00000000007	TRMU	100	88.124	ENSTSYG00000003853	TRMU	97	89.242	Carlito_syrichta
ENSSSCG00000000007	TRMU	96	80.896	ENSCAPG00000013034	TRMU	96	82.238	Cavia_aperea
ENSSSCG00000000007	TRMU	99	86.667	ENSCPOG00000020780	TRMU	97	88.206	Cavia_porcellus
ENSSSCG00000000007	TRMU	100	86.936	ENSCCAG00000021641	TRMU	97	88.971	Cebus_capucinus
ENSSSCG00000000007	TRMU	99	86.874	ENSCATG00000032800	TRMU	97	88.235	Cercocebus_atys
ENSSSCG00000000007	TRMU	99	88.095	ENSCLAG00000017269	TRMU	97	89.189	Chinchilla_lanigera
ENSSSCG00000000007	TRMU	99	87.589	ENSCSAG00000005279	TRMU	97	88.971	Chlorocebus_sabaeus
ENSSSCG00000000007	TRMU	89	78.610	ENSCPBG00000011621	TRMU	94	78.610	Chrysemys_picta_bellii
ENSSSCG00000000007	TRMU	92	48.586	ENSCING00000019371	-	95	48.586	Ciona_intestinalis
ENSSSCG00000000007	TRMU	99	87.351	ENSCANG00000041645	TRMU	97	88.509	Colobus_angolensis_palliatus
ENSSSCG00000000007	TRMU	99	88.010	ENSCGRG00001001739	Trmu	97	89.216	Cricetulus_griseus_chok1gshd
ENSSSCG00000000007	TRMU	99	80.815	ENSCGRG00000002781	Trmu	98	81.863	Cricetulus_griseus_crigri
ENSSSCG00000000007	TRMU	99	66.667	ENSCSEG00000012382	trmu	97	67.901	Cynoglossus_semilaevis
ENSSSCG00000000007	TRMU	99	68.735	ENSCVAG00000001366	trmu	96	70.927	Cyprinodon_variegatus
ENSSSCG00000000007	TRMU	95	68.250	ENSDARG00000043734	trmu	96	68.250	Danio_rerio
ENSSSCG00000000007	TRMU	83	71.004	ENSDNOG00000047245	-	82	82.833	Dasypus_novemcinctus
ENSSSCG00000000007	TRMU	96	89.409	ENSDORG00000007455	Trmu	99	89.409	Dipodomys_ordii
ENSSSCG00000000007	TRMU	89	43.968	FBgn0040337	CG3021	98	43.609	Drosophila_melanogaster
ENSSSCG00000000007	TRMU	92	54.847	ENSEBUG00000007454	trmu	99	54.094	Eptatretus_burgeri
ENSSSCG00000000007	TRMU	97	92.629	ENSEASG00005021725	TRMU	97	92.629	Equus_asinus_asinus
ENSSSCG00000000007	TRMU	97	92.629	ENSECAG00000000467	TRMU	96	92.629	Equus_caballus
ENSSSCG00000000007	TRMU	73	88.614	ENSEEUG00000000074	-	75	96.296	Erinaceus_europaeus
ENSSSCG00000000007	TRMU	99	65.311	ENSELUG00000009464	trmu	99	66.576	Esox_lucius
ENSSSCG00000000007	TRMU	97	91.422	ENSFCAG00000006533	TRMU	97	91.422	Felis_catus
ENSSSCG00000000007	TRMU	89	74.935	ENSFALG00000010035	TRMU	97	74.935	Ficedula_albicollis
ENSSSCG00000000007	TRMU	93	85.969	ENSFDAG00000017472	TRMU	96	87.071	Fukomys_damarensis
ENSSSCG00000000007	TRMU	99	69.451	ENSFHEG00000003162	trmu	98	71.117	Fundulus_heteroclitus
ENSSSCG00000000007	TRMU	96	63.391	ENSGMOG00000001323	trmu	100	63.391	Gadus_morhua
ENSSSCG00000000007	TRMU	96	74.939	ENSGALG00000031922	TRMU	97	74.939	Gallus_gallus
ENSSSCG00000000007	TRMU	95	71.393	ENSGAFG00000013331	trmu	96	71.393	Gambusia_affinis
ENSSSCG00000000007	TRMU	99	64.789	ENSGACG00000019024	trmu	96	66.749	Gasterosteus_aculeatus
ENSSSCG00000000007	TRMU	100	88.361	ENSGGOG00000000203	TRMU	97	90.196	Gorilla_gorilla
ENSSSCG00000000007	TRMU	96	69.727	ENSHBUG00000023421	trmu	98	69.106	Haplochromis_burtoni
ENSSSCG00000000007	TRMU	99	84.286	ENSHGLG00000009278	TRMU	97	85.749	Heterocephalus_glaber_female
ENSSSCG00000000007	TRMU	99	84.286	ENSHGLG00100018863	TRMU	97	85.749	Heterocephalus_glaber_male
ENSSSCG00000000007	TRMU	96	70.223	ENSHCOG00000013459	trmu	97	70.223	Hippocampus_comes
ENSSSCG00000000007	TRMU	95	70.426	ENSIPUG00000009785	trmu	98	70.426	Ictalurus_punctatus
ENSSSCG00000000007	TRMU	99	91.190	ENSSTOG00000010993	TRMU	97	92.157	Ictidomys_tridecemlineatus
ENSSSCG00000000007	TRMU	99	87.770	ENSJJAG00000000667	Trmu	98	88.725	Jaculus_jaculus
ENSSSCG00000000007	TRMU	99	68.258	ENSKMAG00000008516	trmu	97	69.136	Kryptolebias_marmoratus
ENSSSCG00000000007	TRMU	96	68.889	ENSLBEG00000018831	trmu	97	68.889	Labrus_bergylta
ENSSSCG00000000007	TRMU	99	73.077	ENSLACG00000013713	TRMU	97	73.956	Latimeria_chalumnae
ENSSSCG00000000007	TRMU	100	70.379	ENSLOCG00000016066	trmu	95	73.183	Lepisosteus_oculatus
ENSSSCG00000000007	TRMU	99	76.429	ENSLAFG00000005129	TRMU	98	76.642	Loxodonta_africana
ENSSSCG00000000007	TRMU	99	87.589	ENSMFAG00000039767	TRMU	97	88.971	Macaca_fascicularis
ENSSSCG00000000007	TRMU	99	87.589	ENSMMUG00000000807	TRMU	97	88.971	Macaca_mulatta
ENSSSCG00000000007	TRMU	99	87.589	ENSMNEG00000028164	TRMU	97	88.971	Macaca_nemestrina
ENSSSCG00000000007	TRMU	99	87.112	ENSMLEG00000033884	TRMU	97	88.480	Mandrillus_leucophaeus
ENSSSCG00000000007	TRMU	96	69.383	ENSMAMG00000004717	trmu	97	69.383	Mastacembelus_armatus
ENSSSCG00000000007	TRMU	96	70.223	ENSMZEG00005015797	trmu	97	70.223	Maylandia_zebra
ENSSSCG00000000007	TRMU	76	73.939	ENSMGAG00000007550	TRMU	96	73.939	Meleagris_gallopavo
ENSSSCG00000000007	TRMU	99	87.530	ENSMAUG00000022282	Trmu	98	88.725	Mesocricetus_auratus
ENSSSCG00000000007	TRMU	98	90.291	ENSMICG00000029046	TRMU	99	90.686	Microcebus_murinus
ENSSSCG00000000007	TRMU	99	88.010	ENSMOCG00000014641	Trmu	98	89.216	Microtus_ochrogaster
ENSSSCG00000000007	TRMU	96	69.479	ENSMMOG00000007229	trmu	97	69.479	Mola_mola
ENSSSCG00000000007	TRMU	98	79.327	ENSMODG00000007433	TRMU	95	80.098	Monodelphis_domestica
ENSSSCG00000000007	TRMU	99	65.789	ENSMALG00000007721	trmu	97	67.160	Monopterus_albus
ENSSSCG00000000007	TRMU	99	86.747	MGP_CAROLIEiJ_G0020134	Trmu	98	87.745	Mus_caroli
ENSSSCG00000000007	TRMU	99	87.143	ENSMUSG00000022386	Trmu	98	88.480	Mus_musculus
ENSSSCG00000000007	TRMU	99	86.905	MGP_PahariEiJ_G0020139	Trmu	98	88.235	Mus_pahari
ENSSSCG00000000007	TRMU	99	87.143	MGP_SPRETEiJ_G0021031	Trmu	98	88.480	Mus_spretus
ENSSSCG00000000007	TRMU	100	90.974	ENSMPUG00000002523	TRMU	97	92.647	Mustela_putorius_furo
ENSSSCG00000000007	TRMU	99	87.770	ENSNGAG00000005132	Trmu	98	88.943	Nannospalax_galili
ENSSSCG00000000007	TRMU	96	69.975	ENSNBRG00000022690	trmu	100	69.951	Neolamprologus_brichardi
ENSSSCG00000000007	TRMU	100	87.886	ENSNLEG00000015773	TRMU	97	89.461	Nomascus_leucogenys
ENSSSCG00000000007	TRMU	78	70.122	ENSMEUG00000000216	TRMU	99	70.122	Notamacropus_eugenii
ENSSSCG00000000007	TRMU	99	86.905	ENSODEG00000014745	TRMU	98	87.805	Octodon_degus
ENSSSCG00000000007	TRMU	96	69.975	ENSONIG00000009821	trmu	97	69.975	Oreochromis_niloticus
ENSSSCG00000000007	TRMU	92	75.064	ENSOANG00000001891	TRMU	96	76.517	Ornithorhynchus_anatinus
ENSSSCG00000000007	TRMU	93	87.692	ENSOCUG00000003664	TRMU	95	86.967	Oryctolagus_cuniculus
ENSSSCG00000000007	TRMU	98	66.828	ENSORLG00000019015	trmu	99	67.482	Oryzias_latipes
ENSSSCG00000000007	TRMU	98	66.828	ENSORLG00020006830	trmu	99	67.482	Oryzias_latipes_hni
ENSSSCG00000000007	TRMU	98	66.828	ENSORLG00015003907	trmu	99	67.482	Oryzias_latipes_hsok
ENSSSCG00000000007	TRMU	75	61.836	ENSOMEG00000015541	trmu	82	67.699	Oryzias_melastigma
ENSSSCG00000000007	TRMU	99	88.249	ENSOGAG00000008096	TRMU	97	90.148	Otolemur_garnettii
ENSSSCG00000000007	TRMU	99	83.055	ENSOARG00000019475	TRMU	93	88.158	Ovis_aries
ENSSSCG00000000007	TRMU	100	88.361	ENSPPAG00000033944	TRMU	97	90.196	Pan_paniscus
ENSSSCG00000000007	TRMU	96	92.346	ENSPPRG00000004197	TRMU	97	92.157	Panthera_pardus
ENSSSCG00000000007	TRMU	65	89.744	ENSPTIG00000014122	TRMU	98	90.977	Panthera_tigris_altaica
ENSSSCG00000000007	TRMU	100	88.361	ENSPTRG00000014510	TRMU	97	90.196	Pan_troglodytes
ENSSSCG00000000007	TRMU	94	90.633	ENSPANG00000023074	TRMU	96	87.258	Papio_anubis
ENSSSCG00000000007	TRMU	98	68.116	ENSPKIG00000002849	trmu	96	70.426	Paramormyrops_kingsleyae
ENSSSCG00000000007	TRMU	87	78.962	ENSPSIG00000013020	TRMU	96	78.962	Pelodiscus_sinensis
ENSSSCG00000000007	TRMU	98	69.830	ENSPMGG00000004083	trmu	98	70.617	Periophthalmus_magnuspinnatus
ENSSSCG00000000007	TRMU	99	88.729	ENSPEMG00000014007	Trmu	98	89.951	Peromyscus_maniculatus_bairdii
ENSSSCG00000000007	TRMU	95	79.449	ENSPCIG00000009923	TRMU	96	78.624	Phascolarctos_cinereus
ENSSSCG00000000007	TRMU	96	67.980	ENSPFOG00000008197	trmu	87	69.744	Poecilia_formosa
ENSSSCG00000000007	TRMU	99	69.928	ENSPLAG00000008414	trmu	97	71.712	Poecilia_latipinna
ENSSSCG00000000007	TRMU	99	69.690	ENSPMEG00000004326	trmu	97	71.464	Poecilia_mexicana
ENSSSCG00000000007	TRMU	99	69.690	ENSPREG00000007980	trmu	97	71.464	Poecilia_reticulata
ENSSSCG00000000007	TRMU	100	88.361	ENSPPYG00000011949	TRMU	97	90.196	Pongo_abelii
ENSSSCG00000000007	TRMU	93	78.772	ENSPCAG00000013462	TRMU	98	79.737	Procavia_capensis
ENSSSCG00000000007	TRMU	99	90.120	ENSPCOG00000016539	TRMU	97	91.379	Propithecus_coquereli
ENSSSCG00000000007	TRMU	96	82.963	ENSPVAG00000013202	TRMU	98	83.047	Pteropus_vampyrus
ENSSSCG00000000007	TRMU	96	69.727	ENSPNYG00000005629	trmu	97	69.727	Pundamilia_nyererei
ENSSSCG00000000007	TRMU	94	70.633	ENSPNAG00000006339	trmu	93	70.633	Pygocentrus_nattereri
ENSSSCG00000000007	TRMU	99	87.619	ENSRNOG00000016465	Trmu	98	88.971	Rattus_norvegicus
ENSSSCG00000000007	TRMU	99	87.351	ENSRBIG00000038973	TRMU	97	88.725	Rhinopithecus_bieti
ENSSSCG00000000007	TRMU	99	87.589	ENSRROG00000004267	TRMU	97	88.971	Rhinopithecus_roxellana
ENSSSCG00000000007	TRMU	90	31.421	YDL033C	SLM3	91	31.421	Saccharomyces_cerevisiae
ENSSSCG00000000007	TRMU	100	87.411	ENSSBOG00000030184	TRMU	97	88.971	Saimiri_boliviensis_boliviensis
ENSSSCG00000000007	TRMU	90	69.029	ENSSFOG00015020664	trmu	97	70.541	Scleropages_formosus
ENSSSCG00000000007	TRMU	96	70.471	ENSSMAG00000019450	trmu	97	70.471	Scophthalmus_maximus
ENSSSCG00000000007	TRMU	99	69.451	ENSSDUG00000011913	trmu	97	70.864	Seriola_dumerili
ENSSSCG00000000007	TRMU	99	69.690	ENSSLDG00000011684	trmu	97	71.111	Seriola_lalandi_dorsalis
ENSSSCG00000000007	TRMU	95	68.170	ENSSPUG00000017123	TRMU	94	68.170	Sphenodon_punctatus
ENSSSCG00000000007	TRMU	99	69.048	ENSSPAG00000021875	trmu	97	70.370	Stegastes_partitus
ENSSSCG00000000007	TRMU	88	75.603	ENSTGUG00000003663	-	100	75.603	Taeniopygia_guttata
ENSSSCG00000000007	TRMU	96	71.464	ENSTRUG00000001231	trmu	98	71.464	Takifugu_rubripes
ENSSSCG00000000007	TRMU	96	72.099	ENSTNIG00000010484	trmu	96	72.099	Tetraodon_nigroviridis
ENSSSCG00000000007	TRMU	93	52.926	ENSTBEG00000011276	-	97	53.581	Tupaia_belangeri
ENSSSCG00000000007	TRMU	100	91.449	ENSTTRG00000004160	TRMU	97	92.157	Tursiops_truncatus
ENSSSCG00000000007	TRMU	69	91.781	ENSUAMG00000024825	TRMU	97	92.096	Ursus_americanus
ENSSSCG00000000007	TRMU	98	75.971	ENSUMAG00000019079	TRMU	97	91.051	Ursus_maritimus
ENSSSCG00000000007	TRMU	52	80.365	ENSVPAG00000000685	-	100	80.365	Vicugna_pacos
ENSSSCG00000000007	TRMU	100	90.974	ENSVVUG00000024963	TRMU	97	92.402	Vulpes_vulpes
ENSSSCG00000000007	TRMU	99	71.496	ENSXETG00000023304	trmu	96	72.616	Xenopus_tropicalis
ENSSSCG00000000007	TRMU	99	67.453	ENSXCOG00000015105	trmu	96	69.554	Xiphophorus_couchianus
ENSSSCG00000000007	TRMU	99	69.451	ENSXMAG00000006697	trmu	96	71.679	Xiphophorus_maculatus