EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000000040 (Gene tree)
Gene ID: 100157034
Gene Symbol: SEPT3
Alias: -
Full Name: septin 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 50156 bases
Position: chr5:6604283-6654438
Accession: 100157034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000059038	MMR_HSR1	PF01926.23	6.5e-08	1	1
ENSSSCP00000000042	MMR_HSR1	PF01926.23	6.5e-08	1	1
ENSSSCP00000056057	MMR_HSR1	PF01926.23	6.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000040807	SEPT3-203	4578	XM_001928669	ENSSSCP00000059038	358 (aa)	XP_001928704	A0A287BRG9
ENSSSCT00000049671	SEPT3-204	2453	XM_021091436	ENSSSCP00000056057	364 (aa)	XP_020947095	A0A287BHJ1
ENSSSCT00000000043	SEPT3-201	1032	-	ENSSSCP00000000043	343 (aa)	-	F1SJQ2
ENSSSCT00000000042	SEPT3-202	1608	-	ENSSSCP00000000042	356 (aa)	-	F1SJQ3

Gene Model

Click here to download ENSSSCG00000000040's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000000040	SEPT3	89	49.216	ENSSSCG00000017643	SEPT4	76	51.903
ENSSSCG00000000040	SEPT3	83	72.297	ENSSSCG00000017168	SEPT9	80	72.297
ENSSSCG00000000040	SEPT3	88	43.354	ENSSSCG00000014285	SEPT8	68	44.631
ENSSSCG00000000040	SEPT3	81	46.918	ENSSSCG00000007800	SEPT1	79	46.918
ENSSSCG00000000040	SEPT3	83	49.013	ENSSSCG00000016661	SEPT7	68	50.943
ENSSSCG00000000040	SEPT3	86	45.075	ENSSSCG00000010128	-	87	43.966
ENSSSCG00000000040	SEPT3	84	49.007	ENSSSCG00000016370	SEPT2	83	49.320
ENSSSCG00000000040	SEPT3	84	44.333	ENSSSCG00000008986	SEPT11	69	44.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000040	SEPT3	100	98.603	ENSG00000100167	SEPT3	100	98.980	Homo_sapiens
ENSSSCG00000000040	SEPT3	85	88.040	ENSAPOG00000003795	sept3	75	87.708	Acanthochromis_polyacanthus
ENSSSCG00000000040	SEPT3	99	99.155	ENSAMEG00000009380	SEPT3	99	99.155	Ailuropoda_melanoleuca
ENSSSCG00000000040	SEPT3	85	86.379	ENSACIG00000001821	sept3	75	85.902	Amphilophus_citrinellus
ENSSSCG00000000040	SEPT3	85	87.375	ENSAOCG00000003633	sept3	73	87.129	Amphiprion_ocellaris
ENSSSCG00000000040	SEPT3	85	87.708	ENSAPEG00000022582	sept3	96	85.978	Amphiprion_percula
ENSSSCG00000000040	SEPT3	89	83.281	ENSATEG00000000191	sept3	88	83.281	Anabas_testudineus
ENSSSCG00000000040	SEPT3	94	95.210	ENSAPLG00000002801	SEPT3	99	95.210	Anas_platyrhynchos
ENSSSCG00000000040	SEPT3	95	94.675	ENSACAG00000003974	SEPT3	97	94.675	Anolis_carolinensis
ENSSSCG00000000040	SEPT3	100	98.883	ENSANAG00000019445	SEPT3	100	98.980	Aotus_nancymaae
ENSSSCG00000000040	SEPT3	86	86.230	ENSACLG00000009596	-	81	82.353	Astatotilapia_calliptera
ENSSSCG00000000040	SEPT3	91	85.976	ENSAMXG00000018729	sept3	96	85.976	Astyanax_mexicanus
ENSSSCG00000000040	SEPT3	100	97.765	ENSBTAG00000013173	SEPT3	100	97.765	Bos_taurus
ENSSSCG00000000040	SEPT3	100	98.603	ENSCJAG00000043636	SEPT3	100	98.639	Callithrix_jacchus
ENSSSCG00000000040	SEPT3	99	99.160	ENSCAFG00000000995	SEPT3	98	99.160	Canis_familiaris
ENSSSCG00000000040	SEPT3	100	98.045	ENSCHIG00000016257	SEPT3	100	98.045	Capra_hircus
ENSSSCG00000000040	SEPT3	100	98.883	ENSTSYG00000012514	SEPT3	100	98.883	Carlito_syrichta
ENSSSCG00000000040	SEPT3	100	97.500	ENSCAPG00000017776	-	100	97.500	Cavia_aperea
ENSSSCG00000000040	SEPT3	100	87.151	ENSCAPG00000007508	-	100	87.151	Cavia_aperea
ENSSSCG00000000040	SEPT3	99	84.746	ENSCPOG00000004011	-	99	84.746	Cavia_porcellus
ENSSSCG00000000040	SEPT3	100	98.603	ENSCPOG00000013212	-	100	98.603	Cavia_porcellus
ENSSSCG00000000040	SEPT3	100	98.883	ENSCCAG00000022439	SEPT3	100	98.980	Cebus_capucinus
ENSSSCG00000000040	SEPT3	100	98.883	ENSCATG00000045173	SEPT3	100	98.980	Cercocebus_atys
ENSSSCG00000000040	SEPT3	100	97.765	ENSCLAG00000017190	SEPT3	100	97.765	Chinchilla_lanigera
ENSSSCG00000000040	SEPT3	100	98.883	ENSCSAG00000005722	SEPT3	100	98.883	Chlorocebus_sabaeus
ENSSSCG00000000040	SEPT3	95	94.675	ENSCPBG00000020516	SEPT3	97	94.675	Chrysemys_picta_bellii
ENSSSCG00000000040	SEPT3	99	98.870	ENSCANG00000030048	SEPT3	100	98.870	Colobus_angolensis_palliatus
ENSSSCG00000000040	SEPT3	100	99.162	ENSCGRG00001018092	Sept3	100	99.162	Cricetulus_griseus_chok1gshd
ENSSSCG00000000040	SEPT3	91	99.691	ENSCGRG00000016977	Sept3	97	98.777	Cricetulus_griseus_crigri
ENSSSCG00000000040	SEPT3	84	87.333	ENSCVAG00000023430	sept3	74	86.842	Cyprinodon_variegatus
ENSSSCG00000000040	SEPT3	91	80.516	ENSDARG00000030656	sept3	96	80.516	Danio_rerio
ENSSSCG00000000040	SEPT3	97	95.965	ENSDNOG00000032372	SEPT3	91	95.965	Dasypus_novemcinctus
ENSSSCG00000000040	SEPT3	99	86.630	ENSDORG00000014056	Sept3	100	86.630	Dipodomys_ordii
ENSSSCG00000000040	SEPT3	72	100.000	ENSETEG00000004487	SEPT3	79	100.000	Echinops_telfairi
ENSSSCG00000000040	SEPT3	99	98.876	ENSEASG00005001015	-	99	99.140	Equus_asinus_asinus
ENSSSCG00000000040	SEPT3	99	98.876	ENSECAG00000023601	SEPT3	97	98.817	Equus_caballus
ENSSSCG00000000040	SEPT3	91	99.691	ENSEEUG00000011889	SEPT3	100	99.691	Erinaceus_europaeus
ENSSSCG00000000040	SEPT3	85	88.411	ENSELUG00000003004	sept3	97	77.198	Esox_lucius
ENSSSCG00000000040	SEPT3	100	99.162	ENSFCAG00000000889	SEPT3	100	99.162	Felis_catus
ENSSSCG00000000040	SEPT3	95	95.252	ENSFALG00000011773	SEPT3	97	94.412	Ficedula_albicollis
ENSSSCG00000000040	SEPT3	99	97.199	ENSFDAG00000010054	SEPT3	97	97.859	Fukomys_damarensis
ENSSSCG00000000040	SEPT3	86	85.993	ENSFHEG00000005258	sept3	75	85.256	Fundulus_heteroclitus
ENSSSCG00000000040	SEPT3	89	79.817	ENSGMOG00000005438	sept3	98	76.705	Gadus_morhua
ENSSSCG00000000040	SEPT3	95	94.362	ENSGALG00000011913	SEPT3	96	94.362	Gallus_gallus
ENSSSCG00000000040	SEPT3	85	87.708	ENSGAFG00000008333	sept3	73	87.748	Gambusia_affinis
ENSSSCG00000000040	SEPT3	90	82.132	ENSGACG00000015988	sept3	97	82.132	Gasterosteus_aculeatus
ENSSSCG00000000040	SEPT3	77	96.715	ENSGAGG00000005342	-	94	96.715	Gopherus_agassizii
ENSSSCG00000000040	SEPT3	100	98.603	ENSGGOG00000008961	SEPT3	100	98.980	Gorilla_gorilla
ENSSSCG00000000040	SEPT3	86	85.902	ENSHBUG00000005002	sept3	74	85.437	Haplochromis_burtoni
ENSSSCG00000000040	SEPT3	97	98.563	ENSHGLG00000006998	-	99	98.563	Heterocephalus_glaber_female
ENSSSCG00000000040	SEPT3	91	75.375	ENSHGLG00000020767	-	90	75.375	Heterocephalus_glaber_female
ENSSSCG00000000040	SEPT3	91	74.474	ENSHGLG00100019917	-	90	74.474	Heterocephalus_glaber_male
ENSSSCG00000000040	SEPT3	97	98.563	ENSHGLG00100007916	-	99	98.563	Heterocephalus_glaber_male
ENSSSCG00000000040	SEPT3	76	74.539	ENSHCOG00000016310	sept3	74	74.539	Hippocampus_comes
ENSSSCG00000000040	SEPT3	91	84.195	ENSIPUG00000021317	sept3	96	85.106	Ictalurus_punctatus
ENSSSCG00000000040	SEPT3	99	99.155	ENSSTOG00000012963	SEPT3	100	99.155	Ictidomys_tridecemlineatus
ENSSSCG00000000040	SEPT3	99	97.175	ENSJJAG00000019615	Sept3	99	97.175	Jaculus_jaculus
ENSSSCG00000000040	SEPT3	85	86.711	ENSKMAG00000021717	sept3	74	86.755	Kryptolebias_marmoratus
ENSSSCG00000000040	SEPT3	84	86.333	ENSLBEG00000019948	sept3	72	85.294	Labrus_bergylta
ENSSSCG00000000040	SEPT3	99	98.039	ENSLAFG00000015724	SEPT3	99	98.039	Loxodonta_africana
ENSSSCG00000000040	SEPT3	100	98.883	ENSMFAG00000039306	SEPT3	100	98.980	Macaca_fascicularis
ENSSSCG00000000040	SEPT3	100	98.883	ENSMMUG00000015139	SEPT3	100	98.980	Macaca_mulatta
ENSSSCG00000000040	SEPT3	100	98.883	ENSMNEG00000038786	SEPT3	100	98.980	Macaca_nemestrina
ENSSSCG00000000040	SEPT3	84	86.913	ENSMAMG00000004114	sept3	73	86.424	Mastacembelus_armatus
ENSSSCG00000000040	SEPT3	86	86.230	ENSMZEG00005023846	sept3	75	85.761	Maylandia_zebra
ENSSSCG00000000040	SEPT3	91	96.914	ENSMGAG00000012105	SEPT3	86	96.914	Meleagris_gallopavo
ENSSSCG00000000040	SEPT3	91	99.691	ENSMAUG00000014933	Sept3	97	98.777	Mesocricetus_auratus
ENSSSCG00000000040	SEPT3	100	98.324	ENSMICG00000003589	SEPT3	100	98.639	Microcebus_murinus
ENSSSCG00000000040	SEPT3	99	99.155	ENSMOCG00000015408	Sept3	100	99.155	Microtus_ochrogaster
ENSSSCG00000000040	SEPT3	91	84.356	ENSMMOG00000008339	sept3	97	84.356	Mola_mola
ENSSSCG00000000040	SEPT3	76	85.130	ENSMALG00000000364	sept3	94	85.130	Monopterus_albus
ENSSSCG00000000040	SEPT3	91	99.691	MGP_CAROLIEiJ_G0020078	Sept3	97	98.777	Mus_caroli
ENSSSCG00000000040	SEPT3	91	99.691	ENSMUSG00000022456	Sept3	97	98.777	Mus_musculus
ENSSSCG00000000040	SEPT3	91	99.691	MGP_PahariEiJ_G0020080	Sept3	97	98.777	Mus_pahari
ENSSSCG00000000040	SEPT3	91	99.691	MGP_SPRETEiJ_G0020978	Sept3	97	98.777	Mus_spretus
ENSSSCG00000000040	SEPT3	99	90.808	ENSMPUG00000016339	SEPT3	87	90.808	Mustela_putorius_furo
ENSSSCG00000000040	SEPT3	99	97.465	ENSMLUG00000002571	SEPT3	99	97.465	Myotis_lucifugus
ENSSSCG00000000040	SEPT3	99	98.305	ENSNGAG00000020671	Sept3	98	98.305	Nannospalax_galili
ENSSSCG00000000040	SEPT3	88	84.713	ENSNBRG00000018345	sept3	96	84.713	Neolamprologus_brichardi
ENSSSCG00000000040	SEPT3	100	97.765	ENSNLEG00000015691	SEPT3	100	98.639	Nomascus_leucogenys
ENSSSCG00000000040	SEPT3	100	97.486	ENSOPRG00000008638	SEPT3	100	97.486	Ochotona_princeps
ENSSSCG00000000040	SEPT3	98	98.571	ENSODEG00000012406	SEPT3	100	98.571	Octodon_degus
ENSSSCG00000000040	SEPT3	95	80.702	ENSONIG00000018012	sept3	98	82.991	Oreochromis_niloticus
ENSSSCG00000000040	SEPT3	77	94.946	ENSOANG00000004244	SEPT3	98	94.946	Ornithorhynchus_anatinus
ENSSSCG00000000040	SEPT3	99	97.753	ENSOCUG00000008260	SEPT3	62	97.753	Oryctolagus_cuniculus
ENSSSCG00000000040	SEPT3	85	86.711	ENSORLG00000004172	sept3	89	76.696	Oryzias_latipes
ENSSSCG00000000040	SEPT3	85	86.047	ENSORLG00020009259	sept3	78	85.574	Oryzias_latipes_hni
ENSSSCG00000000040	SEPT3	85	86.711	ENSORLG00015007295	sept3	97	80.480	Oryzias_latipes_hsok
ENSSSCG00000000040	SEPT3	85	87.043	ENSOMEG00000000404	sept3	95	85.609	Oryzias_melastigma
ENSSSCG00000000040	SEPT3	100	98.603	ENSOGAG00000014752	SEPT3	100	98.603	Otolemur_garnettii
ENSSSCG00000000040	SEPT3	100	98.603	ENSOARG00000018800	SEPT3	100	98.603	Ovis_aries
ENSSSCG00000000040	SEPT3	100	98.603	ENSPPAG00000013116	SEPT3	100	98.980	Pan_paniscus
ENSSSCG00000000040	SEPT3	100	99.162	ENSPPRG00000002117	SEPT3	100	99.162	Panthera_pardus
ENSSSCG00000000040	SEPT3	99	99.153	ENSPTIG00000011548	SEPT3	99	99.655	Panthera_tigris_altaica
ENSSSCG00000000040	SEPT3	100	98.603	ENSPTRG00000014444	SEPT3	100	98.980	Pan_troglodytes
ENSSSCG00000000040	SEPT3	100	98.883	ENSPANG00000009994	-	100	98.980	Papio_anubis
ENSSSCG00000000040	SEPT3	93	81.429	ENSPKIG00000002056	sept3	98	81.429	Paramormyrops_kingsleyae
ENSSSCG00000000040	SEPT3	91	96.914	ENSPSIG00000012269	SEPT3	97	96.319	Pelodiscus_sinensis
ENSSSCG00000000040	SEPT3	89	82.965	ENSPMGG00000006200	sept3	76	82.965	Periophthalmus_magnuspinnatus
ENSSSCG00000000040	SEPT3	98	98.864	ENSPEMG00000009916	Sept3	98	98.864	Peromyscus_maniculatus_bairdii
ENSSSCG00000000040	SEPT3	93	95.210	ENSPCIG00000004039	SEPT3	99	93.471	Phascolarctos_cinereus
ENSSSCG00000000040	SEPT3	94	82.941	ENSPFOG00000014541	sept3	96	82.941	Poecilia_formosa
ENSSSCG00000000040	SEPT3	85	87.708	ENSPLAG00000010228	sept3	72	87.459	Poecilia_latipinna
ENSSSCG00000000040	SEPT3	85	87.708	ENSPMEG00000019416	sept3	71	87.459	Poecilia_mexicana
ENSSSCG00000000040	SEPT3	85	87.417	ENSPREG00000012774	sept3	91	87.417	Poecilia_reticulata
ENSSSCG00000000040	SEPT3	100	89.665	ENSPPYG00000011886	SEPT3	95	97.735	Pongo_abelii
ENSSSCG00000000040	SEPT3	100	98.324	ENSPCOG00000024794	SEPT3	100	98.639	Propithecus_coquereli
ENSSSCG00000000040	SEPT3	100	97.765	ENSPVAG00000001191	SEPT3	100	97.765	Pteropus_vampyrus
ENSSSCG00000000040	SEPT3	86	85.902	ENSPNYG00000023957	sept3	75	85.437	Pundamilia_nyererei
ENSSSCG00000000040	SEPT3	91	83.537	ENSPNAG00000023001	sept3	96	83.841	Pygocentrus_nattereri
ENSSSCG00000000040	SEPT3	100	98.603	ENSRNOG00000007686	Sept3	100	98.603	Rattus_norvegicus
ENSSSCG00000000040	SEPT3	100	98.603	ENSRBIG00000040851	SEPT3	100	98.639	Rhinopithecus_bieti
ENSSSCG00000000040	SEPT3	99	91.317	ENSRROG00000042463	SEPT3	100	91.317	Rhinopithecus_roxellana
ENSSSCG00000000040	SEPT3	99	99.160	ENSSBOG00000024825	SEPT3	100	94.429	Saimiri_boliviensis_boliviensis
ENSSSCG00000000040	SEPT3	96	93.275	ENSSHAG00000012446	SEPT3	97	90.704	Sarcophilus_harrisii
ENSSSCG00000000040	SEPT3	92	80.508	ENSSFOG00015011047	sept3	98	80.845	Scleropages_formosus
ENSSSCG00000000040	SEPT3	85	85.762	ENSSMAG00000013826	sept3	74	85.762	Scophthalmus_maximus
ENSSSCG00000000040	SEPT3	85	87.708	ENSSDUG00000004549	sept3	73	87.213	Seriola_dumerili
ENSSSCG00000000040	SEPT3	85	87.708	ENSSLDG00000023869	sept3	73	87.213	Seriola_lalandi_dorsalis
ENSSSCG00000000040	SEPT3	92	95.427	ENSSPUG00000005948	SEPT3	93	94.562	Sphenodon_punctatus
ENSSSCG00000000040	SEPT3	82	98.630	ENSTGUG00000009729	SEPT3	100	98.630	Taeniopygia_guttata
ENSSSCG00000000040	SEPT3	85	87.086	ENSTRUG00000000028	sept3	97	81.538	Takifugu_rubripes
ENSSSCG00000000040	SEPT3	85	86.424	ENSTNIG00000004228	sept3	96	86.424	Tetraodon_nigroviridis
ENSSSCG00000000040	SEPT3	100	98.324	ENSTTRG00000017358	SEPT3	100	98.324	Tursiops_truncatus
ENSSSCG00000000040	SEPT3	100	98.883	ENSUMAG00000020618	-	100	98.883	Ursus_maritimus
ENSSSCG00000000040	SEPT3	100	99.162	ENSVVUG00000002589	-	100	99.162	Vulpes_vulpes
ENSSSCG00000000040	SEPT3	94	90.746	ENSXETG00000000261	sept3	96	90.746	Xenopus_tropicalis
ENSSSCG00000000040	SEPT3	85	87.375	ENSXCOG00000013650	sept3	72	87.417	Xiphophorus_couchianus
ENSSSCG00000000040	SEPT3	85	87.417	ENSXMAG00000017559	sept3	91	86.885	Xiphophorus_maculatus