EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000000078 (Gene tree)
Gene ID: 102159442
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 250580 bases
Position: chr5:8060526-8311105
Accession: 102159442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000000083	Ago_hook	PF10427.9	7.2e-18	1	1
ENSSSCP00000041589	Ago_hook	PF10427.9	1.2e-17	1	1
ENSSSCP00000058109	Ago_hook	PF10427.9	1.3e-17	1	1
ENSSSCP00000032960	Ago_hook	PF10427.9	1.3e-17	1	1
ENSSSCP00000034356	Ago_hook	PF10427.9	1.4e-17	1	1
ENSSSCP00000035224	Ago_hook	PF10427.9	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000064217	TNRC6B-203	6149	XM_021092843	ENSSSCP00000041589	1855 (aa)	XP_020948502	A0A287AC46
ENSSSCT00000049384	TNRC6B-205	5885	XM_021092846	ENSSSCP00000035224	1775 (aa)	XP_020948505	A0A286ZUC4
ENSSSCT00000038352	TNRC6B-204	5935	-	ENSSSCP00000032960	1733 (aa)	-	A0A286ZN11
ENSSSCT00000048750	TNRC6B-201	9334	-	ENSSSCP00000034356	1775 (aa)	-	A0A286ZUC4
ENSSSCT00000000084	TNRC6B-206	5379	-	ENSSSCP00000000083	1792 (aa)	-	F1SRA3
ENSSSCT00000065531	TNRC6B-202	7308	XM_021092845	ENSSSCP00000058109	1868 (aa)	XP_020948504	A0A287BNM0

Gene Model

Click here to download ENSSSCG00000000078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000078's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000000078	TNRC6B	99	37.160	ENSSSCG00000038870	TNRC6A	97	36.190
ENSSSCG00000000078	TNRC6B	81	37.760	ENSSSCG00000034373	TNRC6C	93	43.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000078	TNRC6B	99	98.662	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSSSCG00000000078	TNRC6B	99	97.834	ENSAMEG00000011025	TNRC6B	100	97.834	Ailuropoda_melanoleuca
ENSSSCG00000000078	TNRC6B	98	83.219	ENSAPLG00000009347	TNRC6B	100	85.160	Anas_platyrhynchos
ENSSSCG00000000078	TNRC6B	99	73.602	ENSACAG00000007281	TNRC6B	99	73.678	Anolis_carolinensis
ENSSSCG00000000078	TNRC6B	99	98.495	ENSANAG00000035042	TNRC6B	100	97.630	Aotus_nancymaae
ENSSSCG00000000078	TNRC6B	85	48.092	ENSAMXG00000008707	tnrc6b	82	46.830	Astyanax_mexicanus
ENSSSCG00000000078	TNRC6B	100	96.685	ENSBTAG00000021076	TNRC6B	100	96.732	Bos_taurus
ENSSSCG00000000078	TNRC6B	99	97.830	ENSCJAG00000002732	TNRC6B	99	98.873	Callithrix_jacchus
ENSSSCG00000000078	TNRC6B	98	97.497	ENSCAFG00000001255	TNRC6B	99	97.497	Canis_familiaris
ENSSSCG00000000078	TNRC6B	99	96.908	ENSCAFG00020002189	TNRC6B	99	96.948	Canis_lupus_dingo
ENSSSCG00000000078	TNRC6B	99	96.908	ENSCHIG00000003491	TNRC6B	100	96.990	Capra_hircus
ENSSSCG00000000078	TNRC6B	99	97.492	ENSTSYG00000011836	TNRC6B	100	96.919	Carlito_syrichta
ENSSSCG00000000078	TNRC6B	99	95.260	ENSCPOG00000005705	TNRC6B	100	95.217	Cavia_porcellus
ENSSSCG00000000078	TNRC6B	98	95.961	ENSCCAG00000019912	TNRC6B	99	95.961	Cebus_capucinus
ENSSSCG00000000078	TNRC6B	99	96.160	ENSCATG00000029291	TNRC6B	100	96.213	Cercocebus_atys
ENSSSCG00000000078	TNRC6B	99	95.899	ENSCLAG00000016942	TNRC6B	100	96.037	Chinchilla_lanigera
ENSSSCG00000000078	TNRC6B	99	92.752	ENSCSAG00000006021	TNRC6B	99	92.809	Chlorocebus_sabaeus
ENSSSCG00000000078	TNRC6B	90	87.181	ENSCPBG00000022932	TNRC6B	99	86.891	Chrysemys_picta_bellii
ENSSSCG00000000078	TNRC6B	99	97.663	ENSCANG00000030776	TNRC6B	100	96.923	Colobus_angolensis_palliatus
ENSSSCG00000000078	TNRC6B	96	94.774	ENSCGRG00001020166	Tnrc6b	99	94.629	Cricetulus_griseus_chok1gshd
ENSSSCG00000000078	TNRC6B	99	94.802	ENSCGRG00000016696	Tnrc6b	99	94.633	Cricetulus_griseus_crigri
ENSSSCG00000000078	TNRC6B	100	96.119	ENSDNOG00000012744	TNRC6B	100	96.205	Dasypus_novemcinctus
ENSSSCG00000000078	TNRC6B	99	96.056	ENSDORG00000003386	Tnrc6b	100	96.192	Dipodomys_ordii
ENSSSCG00000000078	TNRC6B	99	85.116	ENSETEG00000006570	TNRC6B	99	85.456	Echinops_telfairi
ENSSSCG00000000078	TNRC6B	99	97.357	ENSEASG00005005306	TNRC6B	100	96.915	Equus_asinus_asinus
ENSSSCG00000000078	TNRC6B	100	98.130	ENSECAG00000009759	TNRC6B	100	98.500	Equus_caballus
ENSSSCG00000000078	TNRC6B	59	97.436	ENSEEUG00000008690	-	59	97.436	Erinaceus_europaeus
ENSSSCG00000000078	TNRC6B	100	97.495	ENSFCAG00000004791	TNRC6B	100	97.495	Felis_catus
ENSSSCG00000000078	TNRC6B	95	88.620	ENSFALG00000012195	TNRC6B	100	88.384	Ficedula_albicollis
ENSSSCG00000000078	TNRC6B	99	96.178	ENSFDAG00000021368	TNRC6B	100	96.311	Fukomys_damarensis
ENSSSCG00000000078	TNRC6B	99	88.983	ENSGALG00000012050	TNRC6B	97	88.757	Gallus_gallus
ENSSSCG00000000078	TNRC6B	99	88.282	ENSGAGG00000025188	TNRC6B	99	87.542	Gopherus_agassizii
ENSSSCG00000000078	TNRC6B	99	98.495	ENSGGOG00000008444	TNRC6B	100	97.630	Gorilla_gorilla
ENSSSCG00000000078	TNRC6B	100	95.898	ENSHGLG00000009306	TNRC6B	100	95.824	Heterocephalus_glaber_female
ENSSSCG00000000078	TNRC6B	99	96.113	ENSHGLG00100018108	TNRC6B	100	96.192	Heterocephalus_glaber_male
ENSSSCG00000000078	TNRC6B	80	48.494	ENSIPUG00000001515	tnrc6b	93	49.863	Ictalurus_punctatus
ENSSSCG00000000078	TNRC6B	99	96.563	ENSSTOG00000008927	TNRC6B	100	96.689	Ictidomys_tridecemlineatus
ENSSSCG00000000078	TNRC6B	99	94.624	ENSJJAG00000015779	Tnrc6b	100	94.928	Jaculus_jaculus
ENSSSCG00000000078	TNRC6B	99	61.707	ENSLACG00000000628	-	99	62.067	Latimeria_chalumnae
ENSSSCG00000000078	TNRC6B	77	96.653	ENSLAFG00000014473	TNRC6B	100	96.653	Loxodonta_africana
ENSSSCG00000000078	TNRC6B	99	96.327	ENSMFAG00000003862	TNRC6B	100	96.331	Macaca_fascicularis
ENSSSCG00000000078	TNRC6B	99	96.734	ENSMMUG00000021345	TNRC6B	100	97.396	Macaca_mulatta
ENSSSCG00000000078	TNRC6B	99	96.714	ENSMNEG00000042745	TNRC6B	100	96.714	Macaca_nemestrina
ENSSSCG00000000078	TNRC6B	99	97.830	ENSMLEG00000041780	TNRC6B	100	97.396	Mandrillus_leucophaeus
ENSSSCG00000000078	TNRC6B	99	92.333	ENSMGAG00000012333	TNRC6B	99	88.676	Meleagris_gallopavo
ENSSSCG00000000078	TNRC6B	99	94.746	ENSMAUG00000016123	Tnrc6b	98	94.689	Mesocricetus_auratus
ENSSSCG00000000078	TNRC6B	99	96.839	ENSMICG00000014056	TNRC6B	100	96.812	Microcebus_murinus
ENSSSCG00000000078	TNRC6B	97	95.000	ENSMOCG00000020334	Tnrc6b	100	95.000	Microtus_ochrogaster
ENSSSCG00000000078	TNRC6B	99	94.294	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	94.496	Mus_caroli
ENSSSCG00000000078	TNRC6B	99	94.237	ENSMUSG00000047888	Tnrc6b	100	94.331	Mus_musculus
ENSSSCG00000000078	TNRC6B	99	93.951	MGP_PahariEiJ_G0020045	Tnrc6b	100	94.053	Mus_pahari
ENSSSCG00000000078	TNRC6B	99	96.179	MGP_SPRETEiJ_G0020941	Tnrc6b	100	94.717	Mus_spretus
ENSSSCG00000000078	TNRC6B	97	97.901	ENSMPUG00000016442	TNRC6B	100	93.511	Mustela_putorius_furo
ENSSSCG00000000078	TNRC6B	99	98.662	ENSMLUG00000008765	TNRC6B	99	97.215	Myotis_lucifugus
ENSSSCG00000000078	TNRC6B	99	94.977	ENSNGAG00000021294	Tnrc6b	100	95.052	Nannospalax_galili
ENSSSCG00000000078	TNRC6B	88	98.662	ENSNLEG00000015311	TNRC6B	100	97.867	Nomascus_leucogenys
ENSSSCG00000000078	TNRC6B	90	90.393	ENSOPRG00000012054	TNRC6B	88	90.393	Ochotona_princeps
ENSSSCG00000000078	TNRC6B	99	96.350	ENSODEG00000013146	TNRC6B	100	96.480	Octodon_degus
ENSSSCG00000000078	TNRC6B	93	45.968	ENSONIG00000019679	-	99	42.253	Oreochromis_niloticus
ENSSSCG00000000078	TNRC6B	99	96.169	ENSOCUG00000016128	TNRC6B	100	96.026	Oryctolagus_cuniculus
ENSSSCG00000000078	TNRC6B	98	96.514	ENSOGAG00000011096	TNRC6B	99	96.514	Otolemur_garnettii
ENSSSCG00000000078	TNRC6B	99	96.475	ENSOARG00000017238	TNRC6B	100	96.601	Ovis_aries
ENSSSCG00000000078	TNRC6B	99	98.495	ENSPPAG00000028514	TNRC6B	100	97.865	Pan_paniscus
ENSSSCG00000000078	TNRC6B	98	97.762	ENSPPRG00000017741	TNRC6B	100	98.463	Panthera_pardus
ENSSSCG00000000078	TNRC6B	97	92.994	ENSPTIG00000022064	TNRC6B	98	94.540	Panthera_tigris_altaica
ENSSSCG00000000078	TNRC6B	99	98.161	ENSPTRG00000047826	TNRC6B	100	97.630	Pan_troglodytes
ENSSSCG00000000078	TNRC6B	98	87.536	ENSPANG00000009271	TNRC6B	99	91.447	Papio_anubis
ENSSSCG00000000078	TNRC6B	99	88.331	ENSPSIG00000005318	TNRC6B	99	87.993	Pelodiscus_sinensis
ENSSSCG00000000078	TNRC6B	99	93.852	ENSPEMG00000011403	Tnrc6b	100	94.011	Peromyscus_maniculatus_bairdii
ENSSSCG00000000078	TNRC6B	98	87.137	ENSPCIG00000020347	TNRC6B	99	87.762	Phascolarctos_cinereus
ENSSSCG00000000078	TNRC6B	90	48.826	ENSPFOG00000006033	-	53	50.808	Poecilia_formosa
ENSSSCG00000000078	TNRC6B	65	45.369	ENSPLAG00000001418	-	98	49.360	Poecilia_latipinna
ENSSSCG00000000078	TNRC6B	95	98.662	ENSPPYG00000011849	TNRC6B	100	94.219	Pongo_abelii
ENSSSCG00000000078	TNRC6B	76	93.827	ENSPCAG00000008739	TNRC6B	75	92.323	Procavia_capensis
ENSSSCG00000000078	TNRC6B	99	97.005	ENSPCOG00000020790	TNRC6B	100	97.166	Propithecus_coquereli
ENSSSCG00000000078	TNRC6B	93	96.341	ENSPVAG00000004975	TNRC6B	94	96.341	Pteropus_vampyrus
ENSSSCG00000000078	TNRC6B	63	54.857	ENSPNAG00000011713	tnrc6b	68	54.839	Pygocentrus_nattereri
ENSSSCG00000000078	TNRC6B	99	94.316	ENSRNOG00000024907	Tnrc6b	100	94.134	Rattus_norvegicus
ENSSSCG00000000078	TNRC6B	99	97.830	ENSRBIG00000035576	TNRC6B	99	97.160	Rhinopithecus_bieti
ENSSSCG00000000078	TNRC6B	99	97.830	ENSRROG00000031135	TNRC6B	100	97.041	Rhinopithecus_roxellana
ENSSSCG00000000078	TNRC6B	97	98.495	ENSSBOG00000029743	TNRC6B	99	96.139	Saimiri_boliviensis_boliviensis
ENSSSCG00000000078	TNRC6B	97	87.978	ENSSHAG00000009692	TNRC6B	99	88.087	Sarcophilus_harrisii
ENSSSCG00000000078	TNRC6B	63	95.349	ENSSARG00000007971	-	70	93.182	Sorex_araneus
ENSSSCG00000000078	TNRC6B	90	88.183	ENSSPUG00000010801	TNRC6B	100	87.827	Sphenodon_punctatus
ENSSSCG00000000078	TNRC6B	93	82.850	ENSTGUG00000010138	-	99	84.783	Taeniopygia_guttata
ENSSSCG00000000078	TNRC6B	95	98.827	ENSTTRG00000011465	TNRC6B	98	98.660	Tursiops_truncatus
ENSSSCG00000000078	TNRC6B	99	96.386	ENSUAMG00000007174	TNRC6B	98	97.642	Ursus_americanus
ENSSSCG00000000078	TNRC6B	99	97.734	ENSUMAG00000014336	TNRC6B	100	97.734	Ursus_maritimus
ENSSSCG00000000078	TNRC6B	70	91.717	ENSVPAG00000001467	TNRC6B	75	91.717	Vicugna_pacos
ENSSSCG00000000078	TNRC6B	100	97.651	ENSVVUG00000007064	TNRC6B	100	97.651	Vulpes_vulpes