EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000000116 (Gene tree)
Gene ID: 100737214
Gene Symbol: POLR2F
Alias: HRBP14.4|RPB6
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 12797 bases
Position: chr5:9904948-9917744
Accession: 100737214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000000120	RNA_pol_Rpb6	PF01192.22	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000000122	POLR2F-201	1021	XM_003481541	ENSSSCP00000000120	127 (aa)	XP_003481589	F1SKN8

Gene Model

Click here to download ENSSSCG00000000116's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03020	RNA polymerase	KEGG
ssc04623	Cytosolic DNA-sensing pathway	KEGG
ssc05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000116	POLR2F	100	99.213	ENSG00000100142	POLR2F	100	100.000	Homo_sapiens
ENSSSCG00000000116	POLR2F	100	88.189	ENSAPOG00000002902	polr2f	100	88.189	Acanthochromis_polyacanthus
ENSSSCG00000000116	POLR2F	100	98.425	ENSAMEG00000010331	POLR2F	100	98.425	Ailuropoda_melanoleuca
ENSSSCG00000000116	POLR2F	100	88.189	ENSACIG00000000923	polr2f	100	88.189	Amphilophus_citrinellus
ENSSSCG00000000116	POLR2F	100	88.976	ENSAOCG00000003182	polr2f	100	88.976	Amphiprion_ocellaris
ENSSSCG00000000116	POLR2F	100	88.976	ENSAPEG00000012999	polr2f	100	88.976	Amphiprion_percula
ENSSSCG00000000116	POLR2F	100	88.189	ENSATEG00000008929	polr2f	100	88.189	Anabas_testudineus
ENSSSCG00000000116	POLR2F	80	97.030	ENSAPLG00000015235	POLR2F	85	96.226	Anas_platyrhynchos
ENSSSCG00000000116	POLR2F	100	98.425	ENSACAG00000015288	POLR2F	100	98.425	Anolis_carolinensis
ENSSSCG00000000116	POLR2F	100	99.213	ENSANAG00000020840	POLR2F	100	99.213	Aotus_nancymaae
ENSSSCG00000000116	POLR2F	100	88.976	ENSACLG00000016129	polr2f	100	88.976	Astatotilapia_calliptera
ENSSSCG00000000116	POLR2F	100	90.551	ENSAMXG00000012812	polr2f	100	90.551	Astyanax_mexicanus
ENSSSCG00000000116	POLR2F	100	99.213	ENSBTAG00000004820	POLR2F	100	99.213	Bos_taurus
ENSSSCG00000000116	POLR2F	63	77.500	WBGene00007355	rpb-6	68	70.213	Caenorhabditis_elegans
ENSSSCG00000000116	POLR2F	100	99.213	ENSCJAG00000048241	POLR2F	100	99.213	Callithrix_jacchus
ENSSSCG00000000116	POLR2F	100	98.425	ENSCAFG00000001437	POLR2F	100	98.425	Canis_familiaris
ENSSSCG00000000116	POLR2F	95	98.347	ENSCHIG00000012907	POLR2F	95	98.347	Capra_hircus
ENSSSCG00000000116	POLR2F	100	98.425	ENSTSYG00000008187	POLR2F	100	98.425	Carlito_syrichta
ENSSSCG00000000116	POLR2F	94	99.167	ENSCAPG00000013419	POLR2F	94	99.167	Cavia_aperea
ENSSSCG00000000116	POLR2F	100	99.213	ENSCPOG00000034094	POLR2F	100	99.213	Cavia_porcellus
ENSSSCG00000000116	POLR2F	100	99.213	ENSCCAG00000036489	POLR2F	100	99.213	Cebus_capucinus
ENSSSCG00000000116	POLR2F	100	99.213	ENSCATG00000041014	POLR2F	100	99.213	Cercocebus_atys
ENSSSCG00000000116	POLR2F	100	99.213	ENSCLAG00000017167	POLR2F	100	99.213	Chinchilla_lanigera
ENSSSCG00000000116	POLR2F	100	99.213	ENSCSAG00000006862	POLR2F	100	99.213	Chlorocebus_sabaeus
ENSSSCG00000000116	POLR2F	95	97.521	ENSCPBG00000023030	POLR2F	62	97.521	Chrysemys_picta_bellii
ENSSSCG00000000116	POLR2F	83	73.585	ENSCING00000019359	-	73	75.000	Ciona_intestinalis
ENSSSCG00000000116	POLR2F	100	99.213	ENSCANG00000041884	POLR2F	100	99.213	Colobus_angolensis_palliatus
ENSSSCG00000000116	POLR2F	100	99.213	ENSCGRG00001023541	POLR2F	100	99.213	Cricetulus_griseus_chok1gshd
ENSSSCG00000000116	POLR2F	100	99.213	ENSCGRG00000011921	POLR2F	100	99.213	Cricetulus_griseus_crigri
ENSSSCG00000000116	POLR2F	83	89.623	ENSCSEG00000006848	polr2f	83	89.623	Cynoglossus_semilaevis
ENSSSCG00000000116	POLR2F	100	87.402	ENSCVAG00000010437	polr2f	100	87.402	Cyprinodon_variegatus
ENSSSCG00000000116	POLR2F	100	86.614	ENSDARG00000036625	polr2f	100	86.614	Danio_rerio
ENSSSCG00000000116	POLR2F	100	99.213	ENSDNOG00000005884	POLR2F	100	99.213	Dasypus_novemcinctus
ENSSSCG00000000116	POLR2F	100	99.213	ENSDORG00000024789	Polr2f	100	99.213	Dipodomys_ordii
ENSSSCG00000000116	POLR2F	80	72.115	FBgn0003275	RpII18	78	71.569	Drosophila_melanogaster
ENSSSCG00000000116	POLR2F	56	77.465	ENSEBUG00000008509	polr2f	73	77.465	Eptatretus_burgeri
ENSSSCG00000000116	POLR2F	72	70.330	ENSEBUG00000002842	-	90	62.500	Eptatretus_burgeri
ENSSSCG00000000116	POLR2F	72	97.802	ENSEASG00005018802	-	82	97.802	Equus_asinus_asinus
ENSSSCG00000000116	POLR2F	100	96.850	ENSEEUG00000011014	POLR2F	100	96.850	Erinaceus_europaeus
ENSSSCG00000000116	POLR2F	100	86.614	ENSELUG00000000319	polr2f	100	86.614	Esox_lucius
ENSSSCG00000000116	POLR2F	100	98.425	ENSFCAG00000002806	POLR2F	100	98.425	Felis_catus
ENSSSCG00000000116	POLR2F	100	99.213	ENSFDAG00000009926	POLR2F	100	99.213	Fukomys_damarensis
ENSSSCG00000000116	POLR2F	88	87.500	ENSFHEG00000005448	polr2f	84	87.736	Fundulus_heteroclitus
ENSSSCG00000000116	POLR2F	100	82.677	ENSGMOG00000009967	polr2f	100	82.677	Gadus_morhua
ENSSSCG00000000116	POLR2F	100	96.850	ENSGALG00000012291	POLR2F	100	96.850	Gallus_gallus
ENSSSCG00000000116	POLR2F	100	88.189	ENSGAFG00000017573	polr2f	100	88.189	Gambusia_affinis
ENSSSCG00000000116	POLR2F	100	84.252	ENSGACG00000007322	polr2f	100	84.252	Gasterosteus_aculeatus
ENSSSCG00000000116	POLR2F	100	98.425	ENSGAGG00000021757	POLR2F	100	98.425	Gopherus_agassizii
ENSSSCG00000000116	POLR2F	100	99.213	ENSGGOG00000005213	POLR2F	100	99.213	Gorilla_gorilla
ENSSSCG00000000116	POLR2F	100	88.976	ENSHBUG00000022089	polr2f	100	88.976	Haplochromis_burtoni
ENSSSCG00000000116	POLR2F	100	99.213	ENSHGLG00000018942	POLR2F	100	99.213	Heterocephalus_glaber_female
ENSSSCG00000000116	POLR2F	100	99.213	ENSHGLG00100012851	POLR2F	100	99.213	Heterocephalus_glaber_male
ENSSSCG00000000116	POLR2F	100	86.614	ENSHCOG00000006149	polr2f	100	86.614	Hippocampus_comes
ENSSSCG00000000116	POLR2F	76	90.722	ENSIPUG00000000814	polr2f	100	90.722	Ictalurus_punctatus
ENSSSCG00000000116	POLR2F	100	99.213	ENSSTOG00000025722	POLR2F	100	99.213	Ictidomys_tridecemlineatus
ENSSSCG00000000116	POLR2F	100	99.213	ENSJJAG00000008097	Polr2f	100	99.213	Jaculus_jaculus
ENSSSCG00000000116	POLR2F	100	89.764	ENSKMAG00000014230	polr2f	100	89.764	Kryptolebias_marmoratus
ENSSSCG00000000116	POLR2F	83	88.679	ENSLBEG00000008383	polr2f	88	88.679	Labrus_bergylta
ENSSSCG00000000116	POLR2F	100	93.701	ENSLACG00000003931	POLR2F	100	93.701	Latimeria_chalumnae
ENSSSCG00000000116	POLR2F	100	87.692	ENSLOCG00000011827	polr2f	100	87.692	Lepisosteus_oculatus
ENSSSCG00000000116	POLR2F	100	99.213	ENSLAFG00000012632	POLR2F	100	99.213	Loxodonta_africana
ENSSSCG00000000116	POLR2F	100	99.213	ENSMFAG00000033687	POLR2F	100	99.213	Macaca_fascicularis
ENSSSCG00000000116	POLR2F	95	98.347	ENSMMUG00000038231	POLR2F	99	98.347	Macaca_mulatta
ENSSSCG00000000116	POLR2F	100	99.213	ENSMNEG00000044365	POLR2F	100	99.213	Macaca_nemestrina
ENSSSCG00000000116	POLR2F	100	99.213	ENSMLEG00000033077	POLR2F	100	99.213	Mandrillus_leucophaeus
ENSSSCG00000000116	POLR2F	100	88.976	ENSMAMG00000008056	polr2f	100	88.976	Mastacembelus_armatus
ENSSSCG00000000116	POLR2F	100	88.976	ENSMZEG00005005705	polr2f	100	88.976	Maylandia_zebra
ENSSSCG00000000116	POLR2F	100	96.850	ENSMGAG00000012504	POLR2F	100	96.850	Meleagris_gallopavo
ENSSSCG00000000116	POLR2F	100	99.213	ENSMAUG00000018586	Polr2f	100	99.213	Mesocricetus_auratus
ENSSSCG00000000116	POLR2F	100	99.213	ENSMICG00000013128	POLR2F	100	99.213	Microcebus_murinus
ENSSSCG00000000116	POLR2F	100	99.213	ENSMOCG00000000237	Polr2f	100	99.213	Microtus_ochrogaster
ENSSSCG00000000116	POLR2F	100	88.976	ENSMMOG00000005106	polr2f	100	88.976	Mola_mola
ENSSSCG00000000116	POLR2F	100	96.850	ENSMODG00000019063	POLR2F	100	96.850	Monodelphis_domestica
ENSSSCG00000000116	POLR2F	100	88.976	ENSMALG00000001444	polr2f	100	88.976	Monopterus_albus
ENSSSCG00000000116	POLR2F	100	100.000	MGP_CAROLIEiJ_G0020006	Polr2f	100	100.000	Mus_caroli
ENSSSCG00000000116	POLR2F	100	100.000	ENSMUSG00000033020	Polr2f	100	100.000	Mus_musculus
ENSSSCG00000000116	POLR2F	100	100.000	MGP_PahariEiJ_G0020008	Polr2f	100	100.000	Mus_pahari
ENSSSCG00000000116	POLR2F	100	100.000	MGP_SPRETEiJ_G0020904	Polr2f	100	100.000	Mus_spretus
ENSSSCG00000000116	POLR2F	100	98.425	ENSMPUG00000012997	POLR2F	100	98.425	Mustela_putorius_furo
ENSSSCG00000000116	POLR2F	98	92.742	ENSMLUG00000029612	-	98	92.742	Myotis_lucifugus
ENSSSCG00000000116	POLR2F	100	96.899	ENSMLUG00000014315	-	100	96.899	Myotis_lucifugus
ENSSSCG00000000116	POLR2F	100	99.213	ENSNGAG00000020682	Polr2f	100	99.213	Nannospalax_galili
ENSSSCG00000000116	POLR2F	100	88.189	ENSNBRG00000002492	polr2f	100	88.189	Neolamprologus_brichardi
ENSSSCG00000000116	POLR2F	100	99.213	ENSNLEG00000014987	-	100	99.213	Nomascus_leucogenys
ENSSSCG00000000116	POLR2F	100	99.213	ENSODEG00000014123	POLR2F	100	99.213	Octodon_degus
ENSSSCG00000000116	POLR2F	100	88.189	ENSONIG00000008394	polr2f	100	88.189	Oreochromis_niloticus
ENSSSCG00000000116	POLR2F	100	98.425	ENSOANG00000014684	POLR2F	100	98.425	Ornithorhynchus_anatinus
ENSSSCG00000000116	POLR2F	100	99.213	ENSOCUG00000012064	POLR2F	100	99.213	Oryctolagus_cuniculus
ENSSSCG00000000116	POLR2F	100	86.614	ENSORLG00000014580	polr2f	100	86.614	Oryzias_latipes
ENSSSCG00000000116	POLR2F	100	87.402	ENSORLG00020006910	polr2f	100	87.402	Oryzias_latipes_hni
ENSSSCG00000000116	POLR2F	94	82.500	ENSORLG00015015332	polr2f	77	85.965	Oryzias_latipes_hsok
ENSSSCG00000000116	POLR2F	80	85.294	ENSOMEG00000006530	polr2f	65	80.000	Oryzias_melastigma
ENSSSCG00000000116	POLR2F	100	99.213	ENSOGAG00000025463	POLR2F	100	99.213	Otolemur_garnettii
ENSSSCG00000000116	POLR2F	100	99.213	ENSOARG00000014692	POLR2F	100	99.213	Ovis_aries
ENSSSCG00000000116	POLR2F	100	99.213	ENSPPAG00000024276	POLR2F	100	99.213	Pan_paniscus
ENSSSCG00000000116	POLR2F	100	98.425	ENSPPRG00000013030	POLR2F	100	98.425	Panthera_pardus
ENSSSCG00000000116	POLR2F	95	95.868	ENSPTIG00000000632	POLR2F	99	95.868	Panthera_tigris_altaica
ENSSSCG00000000116	POLR2F	100	99.213	ENSPTRG00000014356	POLR2F	100	99.213	Pan_troglodytes
ENSSSCG00000000116	POLR2F	100	99.213	ENSPANG00000023979	POLR2F	100	99.213	Papio_anubis
ENSSSCG00000000116	POLR2F	100	90.551	ENSPKIG00000002464	polr2f	100	90.551	Paramormyrops_kingsleyae
ENSSSCG00000000116	POLR2F	56	98.592	ENSPSIG00000013913	POLR2F	100	98.592	Pelodiscus_sinensis
ENSSSCG00000000116	POLR2F	100	88.976	ENSPMGG00000009619	polr2f	100	88.976	Periophthalmus_magnuspinnatus
ENSSSCG00000000116	POLR2F	100	99.213	ENSPEMG00000008322	Polr2f	100	99.213	Peromyscus_maniculatus_bairdii
ENSSSCG00000000116	POLR2F	100	96.850	ENSPCIG00000012000	-	100	96.850	Phascolarctos_cinereus
ENSSSCG00000000116	POLR2F	100	87.402	ENSPFOG00000000139	polr2f	100	87.402	Poecilia_formosa
ENSSSCG00000000116	POLR2F	100	87.402	ENSPLAG00000000988	polr2f	100	87.402	Poecilia_latipinna
ENSSSCG00000000116	POLR2F	100	87.402	ENSPMEG00000019063	polr2f	100	87.402	Poecilia_mexicana
ENSSSCG00000000116	POLR2F	77	87.755	ENSPREG00000016749	polr2f	100	87.755	Poecilia_reticulata
ENSSSCG00000000116	POLR2F	100	99.213	ENSPPYG00000011809	POLR2F	100	99.213	Pongo_abelii
ENSSSCG00000000116	POLR2F	100	99.213	ENSPCOG00000025716	POLR2F	100	99.213	Propithecus_coquereli
ENSSSCG00000000116	POLR2F	79	99.000	ENSPVAG00000010107	POLR2F	64	99.000	Pteropus_vampyrus
ENSSSCG00000000116	POLR2F	100	88.976	ENSPNYG00000019790	polr2f	100	88.976	Pundamilia_nyererei
ENSSSCG00000000116	POLR2F	100	89.764	ENSPNAG00000009017	polr2f	100	89.764	Pygocentrus_nattereri
ENSSSCG00000000116	POLR2F	100	100.000	ENSRNOG00000011214	Polr2f	100	100.000	Rattus_norvegicus
ENSSSCG00000000116	POLR2F	100	99.213	ENSRBIG00000044878	POLR2F	100	99.213	Rhinopithecus_bieti
ENSSSCG00000000116	POLR2F	100	99.213	ENSRROG00000019586	POLR2F	100	99.213	Rhinopithecus_roxellana
ENSSSCG00000000116	POLR2F	100	99.213	ENSSBOG00000023340	POLR2F	100	99.213	Saimiri_boliviensis_boliviensis
ENSSSCG00000000116	POLR2F	100	96.850	ENSSHAG00000008502	POLR2F	100	96.850	Sarcophilus_harrisii
ENSSSCG00000000116	POLR2F	100	89.764	ENSSFOG00015012810	polr2f	100	89.764	Scleropages_formosus
ENSSSCG00000000116	POLR2F	100	88.189	ENSSMAG00000005354	polr2f	100	88.189	Scophthalmus_maximus
ENSSSCG00000000116	POLR2F	100	88.976	ENSSDUG00000016273	polr2f	100	88.976	Seriola_dumerili
ENSSSCG00000000116	POLR2F	100	88.976	ENSSLDG00000024895	polr2f	100	88.976	Seriola_lalandi_dorsalis
ENSSSCG00000000116	POLR2F	100	98.425	ENSSPUG00000011343	POLR2F	100	98.425	Sphenodon_punctatus
ENSSSCG00000000116	POLR2F	100	88.976	ENSSPAG00000019646	polr2f	100	88.976	Stegastes_partitus
ENSSSCG00000000116	POLR2F	69	97.727	ENSTGUG00000016504	-	100	97.727	Taeniopygia_guttata
ENSSSCG00000000116	POLR2F	100	97.638	ENSTGUG00000010476	POLR2F	93	97.638	Taeniopygia_guttata
ENSSSCG00000000116	POLR2F	100	89.764	ENSTRUG00000021130	polr2f	71	89.764	Takifugu_rubripes
ENSSSCG00000000116	POLR2F	100	88.976	ENSTNIG00000010827	polr2f	100	88.976	Tetraodon_nigroviridis
ENSSSCG00000000116	POLR2F	79	99.000	ENSTTRG00000004817	POLR2F	64	99.000	Tursiops_truncatus
ENSSSCG00000000116	POLR2F	100	98.425	ENSUAMG00000020504	POLR2F	100	98.425	Ursus_americanus
ENSSSCG00000000116	POLR2F	100	98.425	ENSUMAG00000015052	POLR2F	100	98.425	Ursus_maritimus
ENSSSCG00000000116	POLR2F	95	97.521	ENSVVUG00000024021	POLR2F	92	97.521	Vulpes_vulpes
ENSSSCG00000000116	POLR2F	100	93.701	ENSXETG00000006346	polr2f	100	93.701	Xenopus_tropicalis
ENSSSCG00000000116	POLR2F	100	87.402	ENSXCOG00000015983	polr2f	100	87.402	Xiphophorus_couchianus
ENSSSCG00000000116	POLR2F	100	87.402	ENSXMAG00000001559	polr2f	100	87.402	Xiphophorus_maculatus