EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000000176 (Gene tree)
Gene ID: 100737526
Gene Symbol: DDX23
Alias: PRPF28|SNRNP100|U5-100K|prp28
Full Name: DEAD-box helicase 23
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 23048 bases
Position: chr5:14886694-14909741
Accession: 100737526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000000183	DEAD	PF00270.29	2e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000000185	DDX23-201	5554	XM_021091587	ENSSSCP00000000183	820 (aa)	XP_020947246	F1SPN4

Gene Model

Click here to download ENSSSCG00000000176's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000000176	DDX23	53	37.978	ENSSSCG00000012252	DDX3X	64	37.978
ENSSSCG00000000176	DDX23	51	31.354	ENSSSCG00000015097	DDX6	77	31.159
ENSSSCG00000000176	DDX23	57	39.623	ENSSSCG00000004287	-	67	40.940
ENSSSCG00000000176	DDX23	54	37.555	ENSSSCG00000026430	DDX3Y	78	37.555
ENSSSCG00000000176	DDX23	50	30.900	ENSSSCG00000011803	EIF4A2	92	30.900
ENSSSCG00000000176	DDX23	51	37.529	ENSSSCG00000032092	DDX5	71	39.031
ENSSSCG00000000176	DDX23	52	36.028	ENSSSCG00000024444	DDX59	65	36.028
ENSSSCG00000000176	DDX23	51	40.139	ENSSSCG00000032642	DDX41	75	37.400
ENSSSCG00000000176	DDX23	51	39.110	ENSSSCG00000000104	DDX17	78	38.592
ENSSSCG00000000176	DDX23	52	38.991	ENSSSCG00000012169	-	64	38.991
ENSSSCG00000000176	DDX23	52	35.172	ENSSSCG00000016913	DDX4	56	35.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000176	DDX23	100	99.512	ENSG00000174243	DDX23	100	99.512	Homo_sapiens
ENSSSCG00000000176	DDX23	100	84.569	ENSAPOG00000003760	ddx23	100	85.091	Acanthochromis_polyacanthus
ENSSSCG00000000176	DDX23	100	99.634	ENSAMEG00000007123	DDX23	100	99.634	Ailuropoda_melanoleuca
ENSSSCG00000000176	DDX23	80	93.030	ENSACIG00000000022	ddx23	100	81.553	Amphilophus_citrinellus
ENSSSCG00000000176	DDX23	100	84.569	ENSAOCG00000017348	ddx23	100	85.091	Amphiprion_ocellaris
ENSSSCG00000000176	DDX23	100	85.018	ENSAPEG00000016857	ddx23	100	84.915	Amphiprion_percula
ENSSSCG00000000176	DDX23	100	85.176	ENSATEG00000016800	ddx23	100	85.333	Anabas_testudineus
ENSSSCG00000000176	DDX23	99	81.687	ENSAPLG00000002868	DDX23	99	81.161	Anas_platyrhynchos
ENSSSCG00000000176	DDX23	100	93.057	ENSACAG00000025589	DDX23	96	93.179	Anolis_carolinensis
ENSSSCG00000000176	DDX23	100	99.512	ENSANAG00000018663	DDX23	100	99.512	Aotus_nancymaae
ENSSSCG00000000176	DDX23	92	88.095	ENSAMXG00000017597	ddx23	100	85.298	Astyanax_mexicanus
ENSSSCG00000000176	DDX23	100	99.390	ENSBTAG00000021810	DDX23	100	99.390	Bos_taurus
ENSSSCG00000000176	DDX23	71	67.642	WBGene00017162	ddx-23	79	67.642	Caenorhabditis_elegans
ENSSSCG00000000176	DDX23	100	99.390	ENSCJAG00000020775	DDX23	100	99.390	Callithrix_jacchus
ENSSSCG00000000176	DDX23	100	99.390	ENSCAFG00000025422	DDX23	100	99.390	Canis_familiaris
ENSSSCG00000000176	DDX23	100	99.390	ENSCAFG00020013383	DDX23	100	99.390	Canis_lupus_dingo
ENSSSCG00000000176	DDX23	100	99.268	ENSCHIG00000018783	DDX23	100	99.268	Capra_hircus
ENSSSCG00000000176	DDX23	100	99.146	ENSTSYG00000005429	DDX23	100	99.146	Carlito_syrichta
ENSSSCG00000000176	DDX23	100	98.902	ENSCPOG00000003278	DDX23	100	98.902	Cavia_porcellus
ENSSSCG00000000176	DDX23	89	100.000	ENSCCAG00000029177	DDX23	100	100.000	Cebus_capucinus
ENSSSCG00000000176	DDX23	100	83.171	ENSCATG00000032335	-	100	81.477	Cercocebus_atys
ENSSSCG00000000176	DDX23	100	99.390	ENSCATG00000039797	DDX23	100	99.390	Cercocebus_atys
ENSSSCG00000000176	DDX23	100	98.902	ENSCLAG00000002986	DDX23	100	98.902	Chinchilla_lanigera
ENSSSCG00000000176	DDX23	100	99.390	ENSCSAG00000006240	DDX23	100	99.390	Chlorocebus_sabaeus
ENSSSCG00000000176	DDX23	84	98.983	ENSCHOG00000009027	DDX23	100	98.983	Choloepus_hoffmanni
ENSSSCG00000000176	DDX23	100	92.579	ENSCPBG00000019988	DDX23	100	93.066	Chrysemys_picta_bellii
ENSSSCG00000000176	DDX23	93	69.843	ENSCING00000001913	-	98	69.139	Ciona_intestinalis
ENSSSCG00000000176	DDX23	83	67.350	ENSCSAVG00000004158	-	100	67.350	Ciona_savignyi
ENSSSCG00000000176	DDX23	87	99.860	ENSCANG00000040182	DDX23	100	99.860	Colobus_angolensis_palliatus
ENSSSCG00000000176	DDX23	100	79.537	ENSCANG00000042510	-	100	77.630	Colobus_angolensis_palliatus
ENSSSCG00000000176	DDX23	100	98.902	ENSCGRG00001015090	Ddx23	100	98.902	Cricetulus_griseus_chok1gshd
ENSSSCG00000000176	DDX23	100	98.902	ENSCGRG00000016314	Ddx23	100	98.902	Cricetulus_griseus_crigri
ENSSSCG00000000176	DDX23	83	91.349	ENSCSEG00000020970	ddx23	100	82.070	Cynoglossus_semilaevis
ENSSSCG00000000176	DDX23	95	88.333	ENSCVAG00000015745	ddx23	100	85.333	Cyprinodon_variegatus
ENSSSCG00000000176	DDX23	83	92.217	ENSDARG00000021945	ddx23	93	88.048	Danio_rerio
ENSSSCG00000000176	DDX23	100	99.268	ENSDNOG00000043176	DDX23	100	99.268	Dasypus_novemcinctus
ENSSSCG00000000176	DDX23	100	99.756	ENSDORG00000012659	Ddx23	100	99.756	Dipodomys_ordii
ENSSSCG00000000176	DDX23	85	70.927	FBgn0032690	CG10333	96	66.624	Drosophila_melanogaster
ENSSSCG00000000176	DDX23	99	95.320	ENSETEG00000015816	DDX23	99	95.320	Echinops_telfairi
ENSSSCG00000000176	DDX23	87	78.541	ENSEBUG00000003319	ddx23	93	82.879	Eptatretus_burgeri
ENSSSCG00000000176	DDX23	100	99.512	ENSEASG00005000455	DDX23	100	99.512	Equus_asinus_asinus
ENSSSCG00000000176	DDX23	100	99.634	ENSECAG00000016681	DDX23	100	99.634	Equus_caballus
ENSSSCG00000000176	DDX23	100	90.511	ENSEEUG00000009658	DDX23	100	90.511	Erinaceus_europaeus
ENSSSCG00000000176	DDX23	100	81.983	ENSELUG00000015358	ddx23	98	85.847	Esox_lucius
ENSSSCG00000000176	DDX23	100	99.512	ENSFCAG00000000082	DDX23	100	99.512	Felis_catus
ENSSSCG00000000176	DDX23	100	92.092	ENSFALG00000000133	DDX23	100	92.092	Ficedula_albicollis
ENSSSCG00000000176	DDX23	100	98.902	ENSFDAG00000017059	DDX23	100	98.902	Fukomys_damarensis
ENSSSCG00000000176	DDX23	100	83.942	ENSFHEG00000017499	ddx23	100	83.656	Fundulus_heteroclitus
ENSSSCG00000000176	DDX23	95	83.822	ENSGMOG00000009592	ddx23	95	85.392	Gadus_morhua
ENSSSCG00000000176	DDX23	100	95.128	ENSGALG00000032307	DDX23	100	93.788	Gallus_gallus
ENSSSCG00000000176	DDX23	95	85.987	ENSGAFG00000012366	ddx23	100	84.383	Gambusia_affinis
ENSSSCG00000000176	DDX23	94	86.589	ENSGACG00000003024	ddx23	99	92.114	Gasterosteus_aculeatus
ENSSSCG00000000176	DDX23	100	92.579	ENSGAGG00000007790	DDX23	100	93.066	Gopherus_agassizii
ENSSSCG00000000176	DDX23	100	99.512	ENSGGOG00000015252	DDX23	100	100.000	Gorilla_gorilla
ENSSSCG00000000176	DDX23	100	84.166	ENSHBUG00000011876	ddx23	100	85.333	Haplochromis_burtoni
ENSSSCG00000000176	DDX23	100	98.780	ENSHGLG00000004292	DDX23	100	98.780	Heterocephalus_glaber_female
ENSSSCG00000000176	DDX23	100	98.780	ENSHGLG00100017585	DDX23	100	98.780	Heterocephalus_glaber_male
ENSSSCG00000000176	DDX23	83	91.935	ENSHCOG00000019338	ddx23	100	84.262	Hippocampus_comes
ENSSSCG00000000176	DDX23	92	87.649	ENSIPUG00000005247	DDX23	100	85.122	Ictalurus_punctatus
ENSSSCG00000000176	DDX23	100	99.268	ENSSTOG00000004219	DDX23	100	99.268	Ictidomys_tridecemlineatus
ENSSSCG00000000176	DDX23	100	99.146	ENSJJAG00000018994	Ddx23	100	99.146	Jaculus_jaculus
ENSSSCG00000000176	DDX23	95	85.069	ENSKMAG00000012060	ddx23	100	83.493	Kryptolebias_marmoratus
ENSSSCG00000000176	DDX23	93	88.151	ENSLBEG00000019475	ddx23	100	83.777	Labrus_bergylta
ENSSSCG00000000176	DDX23	92	92.543	ENSLACG00000016977	DDX23	99	92.543	Latimeria_chalumnae
ENSSSCG00000000176	DDX23	88	90.371	ENSLOCG00000007385	ddx23	100	86.983	Lepisosteus_oculatus
ENSSSCG00000000176	DDX23	100	99.024	ENSLAFG00000014227	DDX23	100	99.024	Loxodonta_africana
ENSSSCG00000000176	DDX23	100	99.390	ENSMFAG00000038666	DDX23	100	99.390	Macaca_fascicularis
ENSSSCG00000000176	DDX23	100	99.390	ENSMMUG00000008432	DDX23	100	100.000	Macaca_mulatta
ENSSSCG00000000176	DDX23	100	82.805	ENSMNEG00000045260	-	100	82.195	Macaca_nemestrina
ENSSSCG00000000176	DDX23	100	99.146	ENSMNEG00000040016	DDX23	100	99.146	Macaca_nemestrina
ENSSSCG00000000176	DDX23	100	80.732	ENSMLEG00000035096	-	100	79.056	Mandrillus_leucophaeus
ENSSSCG00000000176	DDX23	100	99.390	ENSMLEG00000042846	DDX23	100	99.390	Mandrillus_leucophaeus
ENSSSCG00000000176	DDX23	100	84.223	ENSMAMG00000024144	ddx23	100	84.970	Mastacembelus_armatus
ENSSSCG00000000176	DDX23	100	84.166	ENSMZEG00005026086	ddx23	100	85.333	Maylandia_zebra
ENSSSCG00000000176	DDX23	100	98.659	ENSMAUG00000012336	Ddx23	100	98.659	Mesocricetus_auratus
ENSSSCG00000000176	DDX23	100	99.146	ENSMICG00000017541	DDX23	100	99.146	Microcebus_murinus
ENSSSCG00000000176	DDX23	100	97.927	ENSMOCG00000018987	Ddx23	100	97.927	Microtus_ochrogaster
ENSSSCG00000000176	DDX23	95	81.737	ENSMMOG00000012406	ddx23	100	79.172	Mola_mola
ENSSSCG00000000176	DDX23	100	97.561	ENSMODG00000009975	DDX23	100	97.561	Monodelphis_domestica
ENSSSCG00000000176	DDX23	100	83.942	ENSMALG00000022366	ddx23	100	84.083	Monopterus_albus
ENSSSCG00000000176	DDX23	100	98.049	MGP_CAROLIEiJ_G0020240	Ddx23	100	98.049	Mus_caroli
ENSSSCG00000000176	DDX23	100	98.171	ENSMUSG00000003360	Ddx23	100	98.171	Mus_musculus
ENSSSCG00000000176	DDX23	100	98.049	MGP_PahariEiJ_G0020243	Ddx23	100	98.049	Mus_pahari
ENSSSCG00000000176	DDX23	100	98.171	MGP_SPRETEiJ_G0021137	Ddx23	100	98.171	Mus_spretus
ENSSSCG00000000176	DDX23	100	99.512	ENSMPUG00000014739	DDX23	100	99.512	Mustela_putorius_furo
ENSSSCG00000000176	DDX23	100	94.268	ENSMLUG00000003683	-	100	94.268	Myotis_lucifugus
ENSSSCG00000000176	DDX23	100	98.902	ENSMLUG00000011033	-	100	98.902	Myotis_lucifugus
ENSSSCG00000000176	DDX23	100	98.902	ENSNGAG00000019018	Ddx23	100	98.902	Nannospalax_galili
ENSSSCG00000000176	DDX23	83	92.972	ENSNBRG00000022928	ddx23	100	82.649	Neolamprologus_brichardi
ENSSSCG00000000176	DDX23	100	92.439	ENSNLEG00000017864	DDX23	100	92.439	Nomascus_leucogenys
ENSSSCG00000000176	DDX23	100	97.317	ENSMEUG00000009477	DDX23	100	97.317	Notamacropus_eugenii
ENSSSCG00000000176	DDX23	100	98.780	ENSOPRG00000007170	-	100	98.780	Ochotona_princeps
ENSSSCG00000000176	DDX23	100	99.024	ENSODEG00000003592	DDX23	100	99.024	Octodon_degus
ENSSSCG00000000176	DDX23	100	84.166	ENSONIG00000017048	ddx23	100	85.351	Oreochromis_niloticus
ENSSSCG00000000176	DDX23	100	98.659	ENSOCUG00000001414	DDX23	100	98.659	Oryctolagus_cuniculus
ENSSSCG00000000176	DDX23	100	82.439	ENSORLG00000012330	ddx23	100	83.152	Oryzias_latipes
ENSSSCG00000000176	DDX23	100	82.561	ENSORLG00020017586	ddx23	100	83.273	Oryzias_latipes_hni
ENSSSCG00000000176	DDX23	81	91.377	ENSORLG00015012361	ddx23	88	91.515	Oryzias_latipes_hsok
ENSSSCG00000000176	DDX23	100	85.073	ENSOMEG00000006453	ddx23	100	84.606	Oryzias_melastigma
ENSSSCG00000000176	DDX23	100	99.390	ENSOGAG00000016813	DDX23	100	99.390	Otolemur_garnettii
ENSSSCG00000000176	DDX23	100	99.268	ENSOARG00000019105	DDX23	90	99.268	Ovis_aries
ENSSSCG00000000176	DDX23	100	72.107	ENSPPAG00000038775	-	100	70.488	Pan_paniscus
ENSSSCG00000000176	DDX23	100	99.512	ENSPPAG00000037807	DDX23	100	100.000	Pan_paniscus
ENSSSCG00000000176	DDX23	100	99.512	ENSPPRG00000015345	DDX23	100	99.512	Panthera_pardus
ENSSSCG00000000176	DDX23	100	99.512	ENSPTIG00000018873	DDX23	100	99.512	Panthera_tigris_altaica
ENSSSCG00000000176	DDX23	100	99.390	ENSPTRG00000004887	DDX23	100	100.000	Pan_troglodytes
ENSSSCG00000000176	DDX23	100	75.732	ENSPTRG00000051972	-	100	75.244	Pan_troglodytes
ENSSSCG00000000176	DDX23	100	99.390	ENSPANG00000019459	DDX23	92	99.390	Papio_anubis
ENSSSCG00000000176	DDX23	93	86.038	ENSPANG00000035074	-	100	86.038	Papio_anubis
ENSSSCG00000000176	DDX23	92	87.237	ENSPKIG00000024110	ddx23	100	85.525	Paramormyrops_kingsleyae
ENSSSCG00000000176	DDX23	100	80.900	ENSPSIG00000002834	DDX23	100	82.238	Pelodiscus_sinensis
ENSSSCG00000000176	DDX23	100	80.122	ENSPMGG00000010243	ddx23	100	81.311	Periophthalmus_magnuspinnatus
ENSSSCG00000000176	DDX23	100	98.537	ENSPEMG00000011305	Ddx23	100	98.537	Peromyscus_maniculatus_bairdii
ENSSSCG00000000176	DDX23	83	85.066	ENSPMAG00000008625	ddx23	100	81.300	Petromyzon_marinus
ENSSSCG00000000176	DDX23	100	97.195	ENSPCIG00000027691	DDX23	100	97.195	Phascolarctos_cinereus
ENSSSCG00000000176	DDX23	95	85.071	ENSPFOG00000012159	ddx23	100	84.970	Poecilia_formosa
ENSSSCG00000000176	DDX23	95	86.229	ENSPLAG00000005052	ddx23	100	84.848	Poecilia_latipinna
ENSSSCG00000000176	DDX23	95	85.951	ENSPMEG00000015385	ddx23	100	84.727	Poecilia_mexicana
ENSSSCG00000000176	DDX23	95	86.785	ENSPREG00000007074	ddx23	100	84.625	Poecilia_reticulata
ENSSSCG00000000176	DDX23	100	99.512	ENSPPYG00000004468	DDX23	97	99.512	Pongo_abelii
ENSSSCG00000000176	DDX23	100	94.512	ENSPCAG00000002016	DDX23	100	94.512	Procavia_capensis
ENSSSCG00000000176	DDX23	100	99.512	ENSPCOG00000025915	DDX23	100	100.000	Propithecus_coquereli
ENSSSCG00000000176	DDX23	100	99.634	ENSPVAG00000009818	DDX23	100	99.634	Pteropus_vampyrus
ENSSSCG00000000176	DDX23	100	80.755	ENSPNYG00000021038	ddx23	100	82.000	Pundamilia_nyererei
ENSSSCG00000000176	DDX23	82	91.111	ENSPNAG00000019203	ddx23	89	92.273	Pygocentrus_nattereri
ENSSSCG00000000176	DDX23	100	98.293	ENSRNOG00000060154	Ddx23	100	98.293	Rattus_norvegicus
ENSSSCG00000000176	DDX23	100	78.415	ENSRBIG00000036337	-	100	79.878	Rhinopithecus_bieti
ENSSSCG00000000176	DDX23	100	86.463	ENSRBIG00000040362	DDX23	100	86.463	Rhinopithecus_bieti
ENSSSCG00000000176	DDX23	100	99.512	ENSRROG00000028964	DDX23	100	99.512	Rhinopithecus_roxellana
ENSSSCG00000000176	DDX23	100	77.927	ENSRROG00000045747	-	100	78.563	Rhinopithecus_roxellana
ENSSSCG00000000176	DDX23	70	37.245	YDR243C	-	81	38.848	Saccharomyces_cerevisiae
ENSSSCG00000000176	DDX23	100	99.268	ENSSBOG00000025799	DDX23	100	99.268	Saimiri_boliviensis_boliviensis
ENSSSCG00000000176	DDX23	100	97.317	ENSSHAG00000006590	DDX23	100	97.317	Sarcophilus_harrisii
ENSSSCG00000000176	DDX23	88	89.655	ENSSFOG00015013273	ddx23	100	86.077	Scleropages_formosus
ENSSSCG00000000176	DDX23	100	83.434	ENSSMAG00000000529	ddx23	100	82.268	Scophthalmus_maximus
ENSSSCG00000000176	DDX23	100	84.793	ENSSDUG00000022459	ddx23	100	85.714	Seriola_dumerili
ENSSSCG00000000176	DDX23	100	84.793	ENSSLDG00000010453	ddx23	100	85.593	Seriola_lalandi_dorsalis
ENSSSCG00000000176	DDX23	93	100.000	ENSSARG00000004534	DDX23	93	100.000	Sorex_araneus
ENSSSCG00000000176	DDX23	100	95.018	ENSSPUG00000016044	DDX23	100	93.917	Sphenodon_punctatus
ENSSSCG00000000176	DDX23	86	90.948	ENSSPAG00000016482	ddx23	100	84.727	Stegastes_partitus
ENSSSCG00000000176	DDX23	96	84.097	ENSTRUG00000000455	ddx23	100	81.423	Takifugu_rubripes
ENSSSCG00000000176	DDX23	100	95.122	ENSTBEG00000016909	DDX23	100	95.122	Tupaia_belangeri
ENSSSCG00000000176	DDX23	100	93.049	ENSTTRG00000004604	DDX23	100	93.049	Tursiops_truncatus
ENSSSCG00000000176	DDX23	100	99.756	ENSUAMG00000027082	DDX23	100	99.756	Ursus_americanus
ENSSSCG00000000176	DDX23	100	99.756	ENSUMAG00000006538	DDX23	100	99.756	Ursus_maritimus
ENSSSCG00000000176	DDX23	100	99.390	ENSVVUG00000019648	DDX23	100	99.390	Vulpes_vulpes
ENSSSCG00000000176	DDX23	100	85.366	ENSXETG00000009807	ddx23	100	81.132	Xenopus_tropicalis
ENSSSCG00000000176	DDX23	95	83.653	ENSXCOG00000011648	ddx23	100	82.160	Xiphophorus_couchianus
ENSSSCG00000000176	DDX23	95	86.369	ENSXMAG00000017387	ddx23	100	84.746	Xiphophorus_maculatus