EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000000276 (Gene tree)
Gene ID: 100518071
Gene Symbol: TARBP2
Alias: Trbp
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 5682 bases
Position: chr5:18718158-18723839
Accession: 100518071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000000291	dsrm	PF00035.26	6.8e-34	1	2
ENSSSCP00000000291	dsrm	PF00035.26	6.8e-34	2	2
ENSSSCP00000051247	dsrm	PF00035.26	8.6e-34	1	2
ENSSSCP00000051247	dsrm	PF00035.26	8.6e-34	2	2
ENSSSCP00000059586	dsrm	PF00035.26	1.5e-24	1	2
ENSSSCP00000059586	dsrm	PF00035.26	1.5e-24	2	2
ENSSSCP00000000291	DND1_DSRM	PF14709.7	4.5e-11	1	1
ENSSSCP00000051247	DND1_DSRM	PF14709.7	4.9e-11	1	1
ENSSSCP00000059586	DND1_DSRM	PF14709.7	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000000296	TARBP2-203	1493	XM_003355410	ENSSSCP00000000291	345 (aa)	XP_003355458	F1SFP3
ENSSSCT00000055374	TARBP2-201	1830	XM_003126194	ENSSSCP00000051247	366 (aa)	XP_003126242	A0A287B559
ENSSSCT00000052105	TARBP2-202	1372	XM_021091718	ENSSSCP00000059586	326 (aa)	XP_020947377	A0A287BSF9

Gene Model

Click here to download ENSSSCG00000000276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000000276	TARBP2	100	45.245	ENSSSCG00000038254	PRKRA	94	45.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000276	TARBP2	100	97.268	ENSG00000139546	TARBP2	99	100.000	Homo_sapiens
ENSSSCG00000000276	TARBP2	100	67.246	ENSAPOG00000019892	tarbp2	100	65.847	Acanthochromis_polyacanthus
ENSSSCG00000000276	TARBP2	100	96.175	ENSAMEG00000012601	TARBP2	100	96.175	Ailuropoda_melanoleuca
ENSSSCG00000000276	TARBP2	100	65.797	ENSACIG00000016780	tarbp2	100	65.027	Amphilophus_citrinellus
ENSSSCG00000000276	TARBP2	100	67.536	ENSAOCG00000005201	tarbp2	100	65.847	Amphiprion_ocellaris
ENSSSCG00000000276	TARBP2	100	67.536	ENSAPEG00000008376	tarbp2	100	65.847	Amphiprion_percula
ENSSSCG00000000276	TARBP2	100	67.536	ENSATEG00000025012	tarbp2	100	65.301	Anabas_testudineus
ENSSSCG00000000276	TARBP2	100	76.638	ENSACAG00000001100	TARBP2	100	73.925	Anolis_carolinensis
ENSSSCG00000000276	TARBP2	100	97.268	ENSANAG00000034453	TARBP2	100	97.268	Aotus_nancymaae
ENSSSCG00000000276	TARBP2	100	66.087	ENSACLG00000018569	tarbp2	95	66.572	Astatotilapia_calliptera
ENSSSCG00000000276	TARBP2	100	66.954	ENSAMXG00000016665	tarbp2	99	64.754	Astyanax_mexicanus
ENSSSCG00000000276	TARBP2	100	97.814	ENSBTAG00000000435	TARBP2	100	97.814	Bos_taurus
ENSSSCG00000000276	TARBP2	100	97.268	ENSCJAG00000018668	TARBP2	100	97.268	Callithrix_jacchus
ENSSSCG00000000276	TARBP2	100	96.448	ENSCAFG00000006874	TARBP2	100	96.448	Canis_familiaris
ENSSSCG00000000276	TARBP2	100	97.541	ENSCAFG00020020735	TARBP2	100	97.541	Canis_lupus_dingo
ENSSSCG00000000276	TARBP2	100	93.514	ENSCHIG00000026017	TARBP2	100	94.879	Capra_hircus
ENSSSCG00000000276	TARBP2	100	96.448	ENSTSYG00000035683	TARBP2	100	96.448	Carlito_syrichta
ENSSSCG00000000276	TARBP2	69	94.222	ENSCAPG00000008981	TARBP2	100	94.222	Cavia_aperea
ENSSSCG00000000276	TARBP2	100	93.716	ENSCPOG00000001009	TARBP2	100	93.716	Cavia_porcellus
ENSSSCG00000000276	TARBP2	100	97.101	ENSCCAG00000033025	TARBP2	100	96.721	Cebus_capucinus
ENSSSCG00000000276	TARBP2	100	96.812	ENSCATG00000026344	TARBP2	100	96.721	Cercocebus_atys
ENSSSCG00000000276	TARBP2	100	94.536	ENSCLAG00000009175	TARBP2	100	94.536	Chinchilla_lanigera
ENSSSCG00000000276	TARBP2	100	97.101	ENSCSAG00000005479	TARBP2	100	96.995	Chlorocebus_sabaeus
ENSSSCG00000000276	TARBP2	100	76.522	ENSCPBG00000000654	TARBP2	100	75.723	Chrysemys_picta_bellii
ENSSSCG00000000276	TARBP2	100	96.232	ENSCANG00000040415	TARBP2	100	95.902	Colobus_angolensis_palliatus
ENSSSCG00000000276	TARBP2	100	94.536	ENSCGRG00001011856	TARBP2	100	94.536	Cricetulus_griseus_chok1gshd
ENSSSCG00000000276	TARBP2	100	94.536	ENSCGRG00000009088	TARBP2	100	94.536	Cricetulus_griseus_crigri
ENSSSCG00000000276	TARBP2	100	68.208	ENSCSEG00000010631	tarbp2	100	66.667	Cynoglossus_semilaevis
ENSSSCG00000000276	TARBP2	100	67.330	ENSCVAG00000009832	tarbp2	100	66.125	Cyprinodon_variegatus
ENSSSCG00000000276	TARBP2	100	67.246	ENSDARG00000070471	tarbp2	100	65.301	Danio_rerio
ENSSSCG00000000276	TARBP2	100	96.721	ENSDNOG00000002144	TARBP2	100	96.721	Dasypus_novemcinctus
ENSSSCG00000000276	TARBP2	95	90.456	ENSDORG00000001390	Tarbp2	100	90.456	Dipodomys_ordii
ENSSSCG00000000276	TARBP2	84	98.649	ENSETEG00000002458	TARBP2	100	80.601	Echinops_telfairi
ENSSSCG00000000276	TARBP2	99	56.598	ENSEBUG00000002377	tarbp2	96	56.869	Eptatretus_burgeri
ENSSSCG00000000276	TARBP2	100	98.087	ENSEASG00005010030	TARBP2	100	98.087	Equus_asinus_asinus
ENSSSCG00000000276	TARBP2	100	97.814	ENSECAG00000011695	TARBP2	100	97.814	Equus_caballus
ENSSSCG00000000276	TARBP2	85	86.218	ENSEEUG00000001128	-	99	86.218	Erinaceus_europaeus
ENSSSCG00000000276	TARBP2	100	67.536	ENSELUG00000010642	tarbp2	96	67.614	Esox_lucius
ENSSSCG00000000276	TARBP2	100	96.995	ENSFCAG00000007757	TARBP2	100	96.995	Felis_catus
ENSSSCG00000000276	TARBP2	100	93.443	ENSFDAG00000011932	TARBP2	100	93.443	Fukomys_damarensis
ENSSSCG00000000276	TARBP2	100	68.116	ENSFHEG00000016118	tarbp2	100	67.826	Fundulus_heteroclitus
ENSSSCG00000000276	TARBP2	100	66.476	ENSGMOG00000001290	tarbp2	100	65.405	Gadus_morhua
ENSSSCG00000000276	TARBP2	72	70.248	ENSGALG00000038939	-	94	68.526	Gallus_gallus
ENSSSCG00000000276	TARBP2	100	67.826	ENSGAFG00000013341	tarbp2	100	65.574	Gambusia_affinis
ENSSSCG00000000276	TARBP2	100	66.092	ENSGACG00000006645	tarbp2	100	64.171	Gasterosteus_aculeatus
ENSSSCG00000000276	TARBP2	100	76.522	ENSGAGG00000021169	TARBP2	100	74.387	Gopherus_agassizii
ENSSSCG00000000276	TARBP2	100	97.101	ENSGGOG00000012637	TARBP2	100	96.995	Gorilla_gorilla
ENSSSCG00000000276	TARBP2	100	66.377	ENSHBUG00000018639	tarbp2	100	65.574	Haplochromis_burtoni
ENSSSCG00000000276	TARBP2	100	93.989	ENSHGLG00000001284	TARBP2	100	93.989	Heterocephalus_glaber_female
ENSSSCG00000000276	TARBP2	100	93.989	ENSHGLG00100011274	TARBP2	100	93.989	Heterocephalus_glaber_male
ENSSSCG00000000276	TARBP2	100	66.474	ENSHCOG00000001027	tarbp2	100	63.388	Hippocampus_comes
ENSSSCG00000000276	TARBP2	100	68.116	ENSIPUG00000023701	tarbp2	100	66.396	Ictalurus_punctatus
ENSSSCG00000000276	TARBP2	100	95.942	ENSSTOG00000003678	TARBP2	100	95.902	Ictidomys_tridecemlineatus
ENSSSCG00000000276	TARBP2	100	67.826	ENSKMAG00000012142	tarbp2	100	65.301	Kryptolebias_marmoratus
ENSSSCG00000000276	TARBP2	100	68.696	ENSLBEG00000015027	tarbp2	100	65.147	Labrus_bergylta
ENSSSCG00000000276	TARBP2	74	94.340	ENSLACG00000007087	TARBP2	96	63.142	Latimeria_chalumnae
ENSSSCG00000000276	TARBP2	100	69.855	ENSLOCG00000005711	tarbp2	100	68.306	Lepisosteus_oculatus
ENSSSCG00000000276	TARBP2	77	85.211	ENSLAFG00000002620	TARBP2	100	85.211	Loxodonta_africana
ENSSSCG00000000276	TARBP2	100	96.812	ENSMFAG00000013567	TARBP2	100	96.721	Macaca_fascicularis
ENSSSCG00000000276	TARBP2	100	97.101	ENSMMUG00000018492	TARBP2	100	96.995	Macaca_mulatta
ENSSSCG00000000276	TARBP2	100	96.812	ENSMNEG00000036477	TARBP2	100	96.721	Macaca_nemestrina
ENSSSCG00000000276	TARBP2	100	96.812	ENSMLEG00000029583	TARBP2	100	96.721	Mandrillus_leucophaeus
ENSSSCG00000000276	TARBP2	85	91.071	ENSMAMG00000010272	tarbp2	97	66.762	Mastacembelus_armatus
ENSSSCG00000000276	TARBP2	100	66.377	ENSMZEG00005006895	tarbp2	100	65.574	Maylandia_zebra
ENSSSCG00000000276	TARBP2	100	94.262	ENSMAUG00000019805	Tarbp2	100	94.262	Mesocricetus_auratus
ENSSSCG00000000276	TARBP2	100	97.971	ENSMICG00000027441	TARBP2	100	97.971	Microcebus_murinus
ENSSSCG00000000276	TARBP2	100	92.623	ENSMOCG00000003691	Tarbp2	100	92.623	Microtus_ochrogaster
ENSSSCG00000000276	TARBP2	100	68.116	ENSMMOG00000010374	tarbp2	100	68.406	Mola_mola
ENSSSCG00000000276	TARBP2	100	66.859	ENSMALG00000009773	tarbp2	100	66.033	Monopterus_albus
ENSSSCG00000000276	TARBP2	100	93.716	MGP_CAROLIEiJ_G0020356	Tarbp2	100	94.262	Mus_caroli
ENSSSCG00000000276	TARBP2	100	93.716	ENSMUSG00000023051	Tarbp2	100	94.262	Mus_musculus
ENSSSCG00000000276	TARBP2	100	93.169	MGP_PahariEiJ_G0020355	Tarbp2	100	93.716	Mus_pahari
ENSSSCG00000000276	TARBP2	100	93.716	MGP_SPRETEiJ_G0021249	Tarbp2	100	94.262	Mus_spretus
ENSSSCG00000000276	TARBP2	100	96.995	ENSMPUG00000005944	TARBP2	100	96.995	Mustela_putorius_furo
ENSSSCG00000000276	TARBP2	100	97.268	ENSMLUG00000010035	TARBP2	100	97.268	Myotis_lucifugus
ENSSSCG00000000276	TARBP2	100	97.268	ENSNLEG00000017690	TARBP2	100	97.268	Nomascus_leucogenys
ENSSSCG00000000276	TARBP2	100	83.188	ENSMEUG00000001916	TARBP2	100	83.060	Notamacropus_eugenii
ENSSSCG00000000276	TARBP2	69	95.111	ENSOPRG00000011397	TARBP2	100	95.111	Ochotona_princeps
ENSSSCG00000000276	TARBP2	66	95.133	ENSODEG00000013413	TARBP2	100	95.133	Octodon_degus
ENSSSCG00000000276	TARBP2	100	68.786	ENSONIG00000005115	tarbp2	97	68.555	Oreochromis_niloticus
ENSSSCG00000000276	TARBP2	100	93.716	ENSOCUG00000005700	TARBP2	100	93.716	Oryctolagus_cuniculus
ENSSSCG00000000276	TARBP2	100	67.147	ENSORLG00000005209	tarbp2	100	65.574	Oryzias_latipes
ENSSSCG00000000276	TARBP2	100	66.859	ENSORLG00020017755	tarbp2	100	64.481	Oryzias_latipes_hni
ENSSSCG00000000276	TARBP2	100	67.147	ENSORLG00015013237	tarbp2	100	64.754	Oryzias_latipes_hsok
ENSSSCG00000000276	TARBP2	100	66.859	ENSOMEG00000018860	tarbp2	100	65.027	Oryzias_melastigma
ENSSSCG00000000276	TARBP2	100	96.995	ENSOGAG00000001744	TARBP2	100	96.995	Otolemur_garnettii
ENSSSCG00000000276	TARBP2	100	97.101	ENSOARG00000016437	TARBP2	100	96.995	Ovis_aries
ENSSSCG00000000276	TARBP2	100	97.268	ENSPPAG00000030429	TARBP2	100	97.268	Pan_paniscus
ENSSSCG00000000276	TARBP2	100	96.995	ENSPPRG00000000189	TARBP2	100	96.995	Panthera_pardus
ENSSSCG00000000276	TARBP2	100	90.027	ENSPTIG00000007859	TARBP2	100	89.218	Panthera_tigris_altaica
ENSSSCG00000000276	TARBP2	100	97.268	ENSPTRG00000005020	TARBP2	100	97.268	Pan_troglodytes
ENSSSCG00000000276	TARBP2	100	96.812	ENSPANG00000010689	TARBP2	100	96.721	Papio_anubis
ENSSSCG00000000276	TARBP2	100	68.116	ENSPKIG00000002455	tarbp2	100	65.860	Paramormyrops_kingsleyae
ENSSSCG00000000276	TARBP2	100	68.406	ENSPMGG00000006497	tarbp2	99	66.667	Periophthalmus_magnuspinnatus
ENSSSCG00000000276	TARBP2	100	92.623	ENSPEMG00000014285	Tarbp2	100	92.623	Peromyscus_maniculatus_bairdii
ENSSSCG00000000276	TARBP2	99	58.382	ENSPMAG00000000105	tarbp2	100	58.632	Petromyzon_marinus
ENSSSCG00000000276	TARBP2	100	83.333	ENSPCIG00000006672	TARBP2	92	83.333	Phascolarctos_cinereus
ENSSSCG00000000276	TARBP2	100	68.406	ENSPFOG00000007586	tarbp2	100	66.120	Poecilia_formosa
ENSSSCG00000000276	TARBP2	100	68.406	ENSPLAG00000017659	tarbp2	100	65.847	Poecilia_latipinna
ENSSSCG00000000276	TARBP2	100	68.406	ENSPMEG00000007775	tarbp2	100	66.120	Poecilia_mexicana
ENSSSCG00000000276	TARBP2	100	68.116	ENSPREG00000007815	tarbp2	100	65.847	Poecilia_reticulata
ENSSSCG00000000276	TARBP2	100	90.164	ENSPPYG00000004583	TARBP2	100	90.164	Pongo_abelii
ENSSSCG00000000276	TARBP2	100	80.601	ENSPCAG00000005352	TARBP2	100	80.601	Procavia_capensis
ENSSSCG00000000276	TARBP2	100	97.814	ENSPCOG00000013102	TARBP2	100	97.814	Propithecus_coquereli
ENSSSCG00000000276	TARBP2	100	92.350	ENSPVAG00000012286	TARBP2	100	92.350	Pteropus_vampyrus
ENSSSCG00000000276	TARBP2	100	66.377	ENSPNYG00000014125	tarbp2	100	65.574	Pundamilia_nyererei
ENSSSCG00000000276	TARBP2	100	67.435	ENSPNAG00000011128	tarbp2	100	66.393	Pygocentrus_nattereri
ENSSSCG00000000276	TARBP2	100	92.174	ENSRNOG00000042355	Tarbp2	100	92.623	Rattus_norvegicus
ENSSSCG00000000276	TARBP2	100	96.812	ENSRBIG00000027150	TARBP2	100	96.721	Rhinopithecus_bieti
ENSSSCG00000000276	TARBP2	100	96.812	ENSRROG00000044783	TARBP2	100	96.812	Rhinopithecus_roxellana
ENSSSCG00000000276	TARBP2	100	96.995	ENSSBOG00000027305	TARBP2	100	96.995	Saimiri_boliviensis_boliviensis
ENSSSCG00000000276	TARBP2	100	85.217	ENSSHAG00000007064	TARBP2	100	85.165	Sarcophilus_harrisii
ENSSSCG00000000276	TARBP2	100	68.116	ENSSFOG00015010784	tarbp2	96	66.760	Scleropages_formosus
ENSSSCG00000000276	TARBP2	100	67.341	ENSSMAG00000012769	tarbp2	100	65.574	Scophthalmus_maximus
ENSSSCG00000000276	TARBP2	100	66.667	ENSSDUG00000018818	tarbp2	100	65.027	Seriola_dumerili
ENSSSCG00000000276	TARBP2	100	66.667	ENSSLDG00000001835	tarbp2	100	65.027	Seriola_lalandi_dorsalis
ENSSSCG00000000276	TARBP2	81	88.060	ENSSARG00000001010	TARBP2	73	88.060	Sorex_araneus
ENSSSCG00000000276	TARBP2	100	57.185	ENSSPUG00000005895	TARBP2	100	57.478	Sphenodon_punctatus
ENSSSCG00000000276	TARBP2	100	67.826	ENSSPAG00000022797	tarbp2	100	65.301	Stegastes_partitus
ENSSSCG00000000276	TARBP2	75	57.471	ENSTGUG00000017031	TARBP2	100	60.938	Taeniopygia_guttata
ENSSSCG00000000276	TARBP2	100	67.246	ENSTRUG00000014379	tarbp2	100	64.946	Takifugu_rubripes
ENSSSCG00000000276	TARBP2	100	67.536	ENSTNIG00000007065	tarbp2	100	65.301	Tetraodon_nigroviridis
ENSSSCG00000000276	TARBP2	53	98.266	ENSTBEG00000012751	-	55	98.266	Tupaia_belangeri
ENSSSCG00000000276	TARBP2	100	96.812	ENSTTRG00000017177	TARBP2	100	96.721	Tursiops_truncatus
ENSSSCG00000000276	TARBP2	100	96.448	ENSUAMG00000009011	TARBP2	100	96.448	Ursus_americanus
ENSSSCG00000000276	TARBP2	100	96.232	ENSUMAG00000010461	TARBP2	100	95.902	Ursus_maritimus
ENSSSCG00000000276	TARBP2	100	97.541	ENSVVUG00000028150	TARBP2	100	97.541	Vulpes_vulpes
ENSSSCG00000000276	TARBP2	100	70.487	ENSXETG00000012644	tarbp2	97	70.112	Xenopus_tropicalis
ENSSSCG00000000276	TARBP2	100	68.406	ENSXMAG00000017836	tarbp2	100	66.120	Xiphophorus_maculatus