EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000000296 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 3397 bases
Position: chr5:19669821-19673217
Accession: 100621706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000000311	zf-U11-48K	PF05253.12	5.7e-19	1	2
ENSSSCP00000000311	zf-U11-48K	PF05253.12	5.7e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000000317	-	462	XM_021091750	ENSSSCP00000000311	153 (aa)	XP_020947409	F1SR50

Gene Model

Click here to download ENSSSCG00000000296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000000296	-	67	34.862	ENSSSCG00000026333	GTSF1	62	34.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000296	-	92	72.368	ENSAMEG00000000958	-	99	72.368	Ailuropoda_melanoleuca
ENSSSCG00000000296	-	92	71.053	ENSCAFG00000006463	-	98	71.053	Canis_familiaris
ENSSSCG00000000296	-	99	68.098	ENSCAFG00020020371	-	100	68.098	Canis_lupus_dingo
ENSSSCG00000000296	-	90	59.333	ENSCPOG00000023851	-	99	59.333	Cavia_porcellus
ENSSSCG00000000296	-	88	57.823	ENSCLAG00000008579	-	100	57.823	Chinchilla_lanigera
ENSSSCG00000000296	-	92	59.868	ENSCGRG00001016136	Gtsf2	98	59.868	Cricetulus_griseus_chok1gshd
ENSSSCG00000000296	-	92	59.868	ENSCGRG00000012950	Gtsf2	98	59.868	Cricetulus_griseus_crigri
ENSSSCG00000000296	-	91	66.225	ENSDORG00000026087	Gtsf2	97	66.225	Dipodomys_ordii
ENSSSCG00000000296	-	70	74.074	ENSEASG00005010262	-	99	74.074	Equus_asinus_asinus
ENSSSCG00000000296	-	70	79.439	ENSECAG00000014413	-	99	79.439	Equus_caballus
ENSSSCG00000000296	-	75	75.652	ENSFCAG00000031316	-	98	75.652	Felis_catus
ENSSSCG00000000296	-	90	60.403	ENSFDAG00000019555	-	99	60.403	Fukomys_damarensis
ENSSSCG00000000296	-	86	61.972	ENSHGLG00000002798	-	98	60.667	Heterocephalus_glaber_female
ENSSSCG00000000296	-	86	61.972	ENSHGLG00100012359	-	98	60.667	Heterocephalus_glaber_male
ENSSSCG00000000296	-	91	63.576	ENSSTOG00000030158	-	100	63.576	Ictidomys_tridecemlineatus
ENSSSCG00000000296	-	92	65.132	ENSJJAG00000016320	Gtsf2	98	65.132	Jaculus_jaculus
ENSSSCG00000000296	-	50	77.632	ENSMAUG00000014687	-	92	71.429	Mesocricetus_auratus
ENSSSCG00000000296	-	97	59.006	ENSMAUG00000017189	-	98	59.006	Mesocricetus_auratus
ENSSSCG00000000296	-	92	59.211	ENSMOCG00000014770	Gtsf2	98	59.211	Microtus_ochrogaster
ENSSSCG00000000296	-	92	61.184	MGP_CAROLIEiJ_G0020380	Gtsf2	98	61.184	Mus_caroli
ENSSSCG00000000296	-	92	61.842	ENSMUSG00000053508	Gtsf2	98	61.842	Mus_musculus
ENSSSCG00000000296	-	92	61.842	MGP_PahariEiJ_G0020379	Gtsf2	98	61.842	Mus_pahari
ENSSSCG00000000296	-	92	61.842	MGP_SPRETEiJ_G0021273	Gtsf2	98	61.842	Mus_spretus
ENSSSCG00000000296	-	92	73.026	ENSMPUG00000005664	-	98	73.026	Mustela_putorius_furo
ENSSSCG00000000296	-	92	55.263	ENSNGAG00000008752	Gtsf2	98	55.263	Nannospalax_galili
ENSSSCG00000000296	-	82	55.797	ENSODEG00000013228	-	98	55.102	Octodon_degus
ENSSSCG00000000296	-	69	81.905	ENSPPRG00000004157	-	82	81.905	Panthera_pardus
ENSSSCG00000000296	-	69	81.905	ENSPTIG00000020670	-	82	81.905	Panthera_tigris_altaica
ENSSSCG00000000296	-	92	55.921	ENSPEMG00000014641	-	93	70.476	Peromyscus_maniculatus_bairdii
ENSSSCG00000000296	-	92	62.500	ENSPEMG00000010828	-	98	62.500	Peromyscus_maniculatus_bairdii
ENSSSCG00000000296	-	92	62.500	ENSRNOG00000036830	RGD1563200	98	62.500	Rattus_norvegicus
ENSSSCG00000000296	-	70	81.308	ENSUAMG00000021668	-	98	81.308	Ursus_americanus
ENSSSCG00000000296	-	70	81.308	ENSUMAG00000011281	-	98	81.308	Ursus_maritimus
ENSSSCG00000000296	-	70	77.570	ENSVVUG00000023684	-	98	77.570	Vulpes_vulpes