EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000000364 (Gene tree)
Gene ID: 100517942
Gene Symbol: SARNP
Alias: CIP29|Hcc-1|THO1
Full Name: SAP domain containing ribonucleoprotein
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 89159 bases
Position: chr5:21199422-21288580
Accession: 100517942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000000381	SAP	PF02037.27	8.8e-11	1	1
ENSSSCP00000047451	SAP	PF02037.27	8.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000000387	SARNP-202	1372	-	ENSSSCP00000000381	210 (aa)	-	F1SPJ5
ENSSSCT00000047885	SARNP-201	3180	XM_003126256	ENSSSCP00000047451	210 (aa)	XP_003126304	F1SPJ5

Gene Model

Click here to download ENSSSCG00000000364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000364	SARNP	100	97.619	ENSG00000205323	SARNP	100	97.619	Homo_sapiens
ENSSSCG00000000364	SARNP	90	60.204	ENSAPOG00000005247	sarnp	78	59.694	Acanthochromis_polyacanthus
ENSSSCG00000000364	SARNP	100	97.619	ENSAMEG00000011769	SARNP	100	97.619	Ailuropoda_melanoleuca
ENSSSCG00000000364	SARNP	98	59.813	ENSAPEG00000016710	sarnp	99	59.535	Amphiprion_percula
ENSSSCG00000000364	SARNP	98	60.664	ENSATEG00000024594	sarnp	98	60.190	Anabas_testudineus
ENSSSCG00000000364	SARNP	99	83.173	ENSACAG00000015446	SARNP	98	83.173	Anolis_carolinensis
ENSSSCG00000000364	SARNP	100	96.667	ENSANAG00000027405	-	100	96.667	Aotus_nancymaae
ENSSSCG00000000364	SARNP	100	85.238	ENSANAG00000025021	-	100	87.619	Aotus_nancymaae
ENSSSCG00000000364	SARNP	98	58.796	ENSACLG00000016479	sarnp	99	58.333	Astatotilapia_calliptera
ENSSSCG00000000364	SARNP	98	60.563	ENSAMXG00000004834	sarnp	99	60.563	Astyanax_mexicanus
ENSSSCG00000000364	SARNP	93	84.184	ENSBTAG00000032446	-	100	78.873	Bos_taurus
ENSSSCG00000000364	SARNP	100	98.571	ENSBTAG00000020662	SARNP	100	98.571	Bos_taurus
ENSSSCG00000000364	SARNP	100	96.190	ENSCJAG00000007853	-	100	96.190	Callithrix_jacchus
ENSSSCG00000000364	SARNP	95	97.500	ENSCAFG00000023714	SARNP	95	97.500	Canis_familiaris
ENSSSCG00000000364	SARNP	100	84.507	ENSCAFG00020026107	SARNP	100	84.507	Canis_lupus_dingo
ENSSSCG00000000364	SARNP	99	88.406	ENSCHIG00000013335	-	98	88.406	Capra_hircus
ENSSSCG00000000364	SARNP	100	79.048	ENSCHIG00000017443	-	100	79.524	Capra_hircus
ENSSSCG00000000364	SARNP	100	98.095	ENSTSYG00000009225	SARNP	100	98.095	Carlito_syrichta
ENSSSCG00000000364	SARNP	100	99.048	ENSCPOG00000011755	-	100	99.048	Cavia_porcellus
ENSSSCG00000000364	SARNP	100	85.714	ENSCCAG00000004296	-	95	84.951	Cebus_capucinus
ENSSSCG00000000364	SARNP	100	97.619	ENSCCAG00000019247	-	100	97.619	Cebus_capucinus
ENSSSCG00000000364	SARNP	100	77.619	ENSCCAG00000030892	-	98	78.095	Cebus_capucinus
ENSSSCG00000000364	SARNP	100	87.619	ENSCATG00000042076	-	98	87.619	Cercocebus_atys
ENSSSCG00000000364	SARNP	100	97.619	ENSCATG00000045088	SARNP	100	97.619	Cercocebus_atys
ENSSSCG00000000364	SARNP	100	98.095	ENSCLAG00000007774	-	100	98.095	Chinchilla_lanigera
ENSSSCG00000000364	SARNP	100	97.619	ENSCSAG00000005303	SARNP	98	97.619	Chlorocebus_sabaeus
ENSSSCG00000000364	SARNP	94	92.929	ENSCHOG00000005081	SARNP	100	92.929	Choloepus_hoffmanni
ENSSSCG00000000364	SARNP	99	86.603	ENSCPBG00000012618	SARNP	99	86.603	Chrysemys_picta_bellii
ENSSSCG00000000364	SARNP	99	35.526	ENSCING00000015811	-	99	39.474	Ciona_intestinalis
ENSSSCG00000000364	SARNP	100	97.143	ENSCANG00000027918	-	100	97.143	Colobus_angolensis_palliatus
ENSSSCG00000000364	SARNP	100	97.619	ENSCGRG00001018129	-	100	97.619	Cricetulus_griseus_chok1gshd
ENSSSCG00000000364	SARNP	100	79.048	ENSCGRG00001013880	-	100	79.048	Cricetulus_griseus_chok1gshd
ENSSSCG00000000364	SARNP	98	71.981	ENSCGRG00001022403	-	78	70.244	Cricetulus_griseus_chok1gshd
ENSSSCG00000000364	SARNP	99	77.990	ENSCGRG00000000109	-	76	76.585	Cricetulus_griseus_crigri
ENSSSCG00000000364	SARNP	100	97.619	ENSCGRG00000015182	-	100	97.619	Cricetulus_griseus_crigri
ENSSSCG00000000364	SARNP	100	79.048	ENSCGRG00000004298	-	100	79.048	Cricetulus_griseus_crigri
ENSSSCG00000000364	SARNP	98	57.143	ENSCVAG00000010924	sarnp	99	57.604	Cyprinodon_variegatus
ENSSSCG00000000364	SARNP	98	60.000	ENSDARG00000059357	sarnp	98	60.488	Danio_rerio
ENSSSCG00000000364	SARNP	100	96.667	ENSDNOG00000014518	SARNP	100	96.667	Dasypus_novemcinctus
ENSSSCG00000000364	SARNP	100	97.143	ENSDORG00000001065	-	100	97.143	Dipodomys_ordii
ENSSSCG00000000364	SARNP	99	53.774	ENSEBUG00000016080	sarnp	98	52.830	Eptatretus_burgeri
ENSSSCG00000000364	SARNP	100	99.048	ENSECAG00000000708	SARNP	100	99.048	Equus_caballus
ENSSSCG00000000364	SARNP	98	57.870	ENSELUG00000006786	HCC1	97	57.870	Esox_lucius
ENSSSCG00000000364	SARNP	98	58.879	ENSELUG00000020983	sarnp	99	58.491	Esox_lucius
ENSSSCG00000000364	SARNP	100	96.667	ENSFCAG00000037076	SARNP	100	96.667	Felis_catus
ENSSSCG00000000364	SARNP	90	76.596	ENSFALG00000000679	SARNP	73	77.005	Ficedula_albicollis
ENSSSCG00000000364	SARNP	100	98.571	ENSFDAG00000007766	SARNP	100	98.571	Fukomys_damarensis
ENSSSCG00000000364	SARNP	98	56.682	ENSFHEG00000012192	sarnp	99	57.143	Fundulus_heteroclitus
ENSSSCG00000000364	SARNP	98	54.327	ENSGMOG00000011467	sarnp	98	54.327	Gadus_morhua
ENSSSCG00000000364	SARNP	99	84.689	ENSGALG00000030342	SARNP	99	84.689	Gallus_gallus
ENSSSCG00000000364	SARNP	98	57.143	ENSGAFG00000019183	sarnp	99	57.604	Gambusia_affinis
ENSSSCG00000000364	SARNP	98	56.604	ENSGACG00000011615	sarnp	99	56.190	Gasterosteus_aculeatus
ENSSSCG00000000364	SARNP	100	83.810	ENSGGOG00000041309	-	100	84.286	Gorilla_gorilla
ENSSSCG00000000364	SARNP	100	97.619	ENSGGOG00000013217	SARNP	100	97.619	Gorilla_gorilla
ENSSSCG00000000364	SARNP	98	59.259	ENSHBUG00000008761	sarnp	99	58.796	Haplochromis_burtoni
ENSSSCG00000000364	SARNP	100	98.095	ENSHGLG00000016869	SARNP	100	98.095	Heterocephalus_glaber_female
ENSSSCG00000000364	SARNP	100	98.095	ENSHGLG00100014657	SARNP	100	98.095	Heterocephalus_glaber_male
ENSSSCG00000000364	SARNP	99	54.419	ENSHCOG00000015510	sarnp	99	54.206	Hippocampus_comes
ENSSSCG00000000364	SARNP	98	58.654	ENSIPUG00000012503	Sarnp	99	59.615	Ictalurus_punctatus
ENSSSCG00000000364	SARNP	100	99.048	ENSSTOG00000000283	SARNP	100	99.048	Ictidomys_tridecemlineatus
ENSSSCG00000000364	SARNP	100	91.905	ENSJJAG00000001070	-	100	91.905	Jaculus_jaculus
ENSSSCG00000000364	SARNP	92	83.938	ENSJJAG00000011057	-	90	83.938	Jaculus_jaculus
ENSSSCG00000000364	SARNP	98	58.257	ENSKMAG00000013400	sarnp	99	58.716	Kryptolebias_marmoratus
ENSSSCG00000000364	SARNP	98	56.604	ENSLBEG00000025038	sarnp	99	56.881	Labrus_bergylta
ENSSSCG00000000364	SARNP	95	71.859	ENSLACG00000018719	SARNP	88	71.859	Latimeria_chalumnae
ENSSSCG00000000364	SARNP	88	44.503	ENSLACG00000014810	-	100	44.503	Latimeria_chalumnae
ENSSSCG00000000364	SARNP	98	65.888	ENSLOCG00000003621	sarnp	98	66.047	Lepisosteus_oculatus
ENSSSCG00000000364	SARNP	100	97.143	ENSLAFG00000015053	SARNP	100	97.143	Loxodonta_africana
ENSSSCG00000000364	SARNP	100	90.476	ENSMFAG00000032419	-	98	90.476	Macaca_fascicularis
ENSSSCG00000000364	SARNP	100	97.619	ENSMFAG00000045270	SARNP	100	97.619	Macaca_fascicularis
ENSSSCG00000000364	SARNP	100	97.619	ENSMMUG00000006289	-	100	97.619	Macaca_mulatta
ENSSSCG00000000364	SARNP	100	90.476	ENSMMUG00000037731	-	100	90.476	Macaca_mulatta
ENSSSCG00000000364	SARNP	100	79.524	ENSMNEG00000030688	-	98	75.943	Macaca_nemestrina
ENSSSCG00000000364	SARNP	99	89.423	ENSMNEG00000041520	-	97	89.655	Macaca_nemestrina
ENSSSCG00000000364	SARNP	100	97.619	ENSMNEG00000044633	-	100	97.619	Macaca_nemestrina
ENSSSCG00000000364	SARNP	67	95.000	ENSMLEG00000038545	-	86	95.000	Mandrillus_leucophaeus
ENSSSCG00000000364	SARNP	100	87.143	ENSMLEG00000037790	-	98	87.143	Mandrillus_leucophaeus
ENSSSCG00000000364	SARNP	98	58.019	ENSMAMG00000005942	sarnp	99	57.547	Mastacembelus_armatus
ENSSSCG00000000364	SARNP	98	59.259	ENSMZEG00005023533	sarnp	99	58.796	Maylandia_zebra
ENSSSCG00000000364	SARNP	99	84.689	ENSMGAG00000001807	SARNP	99	84.689	Meleagris_gallopavo
ENSSSCG00000000364	SARNP	100	96.190	ENSMAUG00000005256	-	100	96.190	Mesocricetus_auratus
ENSSSCG00000000364	SARNP	100	98.095	ENSMICG00000010902	-	100	98.095	Microcebus_murinus
ENSSSCG00000000364	SARNP	100	97.619	ENSMOCG00000006502	-	100	97.619	Microtus_ochrogaster
ENSSSCG00000000364	SARNP	99	54.762	ENSMMOG00000013258	sarnp	99	51.905	Mola_mola
ENSSSCG00000000364	SARNP	90	57.292	ENSMALG00000009106	sarnp	84	55.897	Monopterus_albus
ENSSSCG00000000364	SARNP	100	96.190	MGP_CAROLIEiJ_G0015958	-	100	96.190	Mus_caroli
ENSSSCG00000000364	SARNP	100	96.190	ENSMUSG00000078427	Sarnp	100	96.190	Mus_musculus
ENSSSCG00000000364	SARNP	94	95.939	MGP_PahariEiJ_G0031126	-	100	95.939	Mus_pahari
ENSSSCG00000000364	SARNP	100	96.190	MGP_SPRETEiJ_G0016783	-	100	96.190	Mus_spretus
ENSSSCG00000000364	SARNP	100	98.571	ENSMPUG00000000885	SARNP	100	98.571	Mustela_putorius_furo
ENSSSCG00000000364	SARNP	80	94.012	ENSMLUG00000003565	SARNP	100	94.012	Myotis_lucifugus
ENSSSCG00000000364	SARNP	100	96.190	ENSNGAG00000010245	-	100	96.190	Nannospalax_galili
ENSSSCG00000000364	SARNP	87	92.896	ENSNLEG00000017599	-	99	92.896	Nomascus_leucogenys
ENSSSCG00000000364	SARNP	100	85.714	ENSMEUG00000014879	SARNP	100	85.714	Notamacropus_eugenii
ENSSSCG00000000364	SARNP	100	74.762	ENSOPRG00000007733	SARNP	100	74.762	Ochotona_princeps
ENSSSCG00000000364	SARNP	100	79.524	ENSODEG00000012047	-	100	81.429	Octodon_degus
ENSSSCG00000000364	SARNP	100	98.095	ENSODEG00000004608	-	100	98.095	Octodon_degus
ENSSSCG00000000364	SARNP	98	59.722	ENSONIG00000016523	sarnp	99	59.259	Oreochromis_niloticus
ENSSSCG00000000364	SARNP	95	85.714	ENSOANG00000002882	SARNP	100	85.714	Ornithorhynchus_anatinus
ENSSSCG00000000364	SARNP	98	94.686	ENSOCUG00000010117	SARNP	99	94.686	Oryctolagus_cuniculus
ENSSSCG00000000364	SARNP	98	59.330	ENSORLG00000029565	sarnp	87	58.852	Oryzias_latipes
ENSSSCG00000000364	SARNP	98	59.330	ENSORLG00015021649	sarnp	87	58.852	Oryzias_latipes_hsok
ENSSSCG00000000364	SARNP	98	58.654	ENSOMEG00000014699	sarnp	98	58.173	Oryzias_melastigma
ENSSSCG00000000364	SARNP	75	95.541	ENSOGAG00000001693	SARNP	94	95.541	Otolemur_garnettii
ENSSSCG00000000364	SARNP	100	98.571	ENSOARG00000011218	SARNP	100	98.571	Ovis_aries
ENSSSCG00000000364	SARNP	100	97.619	ENSPPAG00000039513	SARNP	100	97.619	Pan_paniscus
ENSSSCG00000000364	SARNP	100	80.000	ENSPPAG00000042587	-	98	80.476	Pan_paniscus
ENSSSCG00000000364	SARNP	100	96.667	ENSPPRG00000020704	SARNP	100	96.667	Panthera_pardus
ENSSSCG00000000364	SARNP	100	80.000	ENSPTRG00000046696	-	98	80.476	Pan_troglodytes
ENSSSCG00000000364	SARNP	100	97.619	ENSPTRG00000029747	SARNP	100	97.619	Pan_troglodytes
ENSSSCG00000000364	SARNP	100	88.571	ENSPANG00000006001	-	98	88.571	Papio_anubis
ENSSSCG00000000364	SARNP	100	97.143	ENSPANG00000013149	-	100	97.143	Papio_anubis
ENSSSCG00000000364	SARNP	98	61.321	ENSPKIG00000002212	sarnp	99	60.369	Paramormyrops_kingsleyae
ENSSSCG00000000364	SARNP	98	84.390	ENSPSIG00000002998	SARNP	98	84.390	Pelodiscus_sinensis
ENSSSCG00000000364	SARNP	100	96.667	ENSPEMG00000000923	-	100	96.667	Peromyscus_maniculatus_bairdii
ENSSSCG00000000364	SARNP	98	51.628	ENSPMAG00000009808	sarnp	95	51.584	Petromyzon_marinus
ENSSSCG00000000364	SARNP	95	94.975	ENSPCIG00000024663	SARNP	99	94.975	Phascolarctos_cinereus
ENSSSCG00000000364	SARNP	98	57.604	ENSPFOG00000013517	sarnp	99	58.257	Poecilia_formosa
ENSSSCG00000000364	SARNP	98	56.944	ENSPLAG00000017096	sarnp	99	58.986	Poecilia_latipinna
ENSSSCG00000000364	SARNP	98	56.944	ENSPMEG00000014306	sarnp	99	58.986	Poecilia_mexicana
ENSSSCG00000000364	SARNP	99	50.952	ENSPREG00000019598	sarnp	85	50.476	Poecilia_reticulata
ENSSSCG00000000364	SARNP	100	97.619	ENSPPYG00000004630	SARNP	100	97.619	Pongo_abelii
ENSSSCG00000000364	SARNP	98	59.330	ENSPNAG00000000975	sarnp	99	59.330	Pygocentrus_nattereri
ENSSSCG00000000364	SARNP	100	97.143	ENSRNOG00000030520	Sarnp	100	97.143	Rattus_norvegicus
ENSSSCG00000000364	SARNP	95	95.477	ENSRBIG00000019503	-	96	95.477	Rhinopithecus_bieti
ENSSSCG00000000364	SARNP	100	86.854	ENSRBIG00000026928	-	98	87.324	Rhinopithecus_bieti
ENSSSCG00000000364	SARNP	100	97.143	ENSRBIG00000039295	-	100	97.143	Rhinopithecus_bieti
ENSSSCG00000000364	SARNP	100	72.857	ENSRBIG00000037388	-	98	73.810	Rhinopithecus_bieti
ENSSSCG00000000364	SARNP	100	97.143	ENSRROG00000035177	-	100	97.143	Rhinopithecus_roxellana
ENSSSCG00000000364	SARNP	100	86.854	ENSRROG00000044575	-	98	87.324	Rhinopithecus_roxellana
ENSSSCG00000000364	SARNP	100	93.810	ENSSBOG00000028635	-	98	93.810	Saimiri_boliviensis_boliviensis
ENSSSCG00000000364	SARNP	100	80.000	ENSSBOG00000022787	-	97	80.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000000364	SARNP	100	97.619	ENSSBOG00000035337	-	100	97.619	Saimiri_boliviensis_boliviensis
ENSSSCG00000000364	SARNP	100	95.238	ENSSHAG00000008865	SARNP	100	95.238	Sarcophilus_harrisii
ENSSSCG00000000364	SARNP	98	55.217	ENSSFOG00015020709	sarnp	99	60.976	Scleropages_formosus
ENSSSCG00000000364	SARNP	98	56.938	ENSSMAG00000018587	sarnp	98	56.459	Scophthalmus_maximus
ENSSSCG00000000364	SARNP	98	60.952	ENSSDUG00000005484	sarnp	99	60.476	Seriola_dumerili
ENSSSCG00000000364	SARNP	98	60.952	ENSSLDG00000003775	sarnp	99	60.476	Seriola_lalandi_dorsalis
ENSSSCG00000000364	SARNP	100	70.000	ENSSARG00000004858	SARNP	100	70.000	Sorex_araneus
ENSSSCG00000000364	SARNP	95	65.842	ENSSPUG00000015135	SARNP	96	65.842	Sphenodon_punctatus
ENSSSCG00000000364	SARNP	94	75.635	ENSTGUG00000016126	SARNP	100	75.635	Taeniopygia_guttata
ENSSSCG00000000364	SARNP	99	55.300	ENSTRUG00000009497	-	99	57.619	Takifugu_rubripes
ENSSSCG00000000364	SARNP	99	55.556	ENSTNIG00000012432	sarnp	99	55.556	Tetraodon_nigroviridis
ENSSSCG00000000364	SARNP	100	92.381	ENSTTRG00000009735	SARNP	100	92.381	Tursiops_truncatus
ENSSSCG00000000364	SARNP	78	91.515	ENSUAMG00000015093	-	86	91.515	Ursus_americanus
ENSSSCG00000000364	SARNP	94	98.477	ENSVPAG00000009515	SARNP	100	98.477	Vicugna_pacos
ENSSSCG00000000364	SARNP	100	97.619	ENSVVUG00000022779	SARNP	100	97.619	Vulpes_vulpes
ENSSSCG00000000364	SARNP	98	74.757	ENSXETG00000024657	sarnp	98	74.757	Xenopus_tropicalis
ENSSSCG00000000364	SARNP	98	57.604	ENSXMAG00000009356	sarnp	99	58.065	Xiphophorus_maculatus