EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000000393 (Gene tree)
Gene ID: 100153107
Gene Symbol: PAN2
Alias: KIAA0710|USP52|hPAN2
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 38179 bases
Position: chr5:21710772-21748950
Accession: 100153107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000000418	RNase_T	PF00929.24	3.5e-19	1	1
ENSSSCP00000040370	RNase_T	PF00929.24	3.7e-19	1	1
ENSSSCP00000057812	RNase_T	PF00929.24	3.7e-19	1	1
ENSSSCP00000041335	RNase_T	PF00929.24	3.7e-19	1	1
ENSSSCP00000057836	RNase_T	PF00929.24	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000038548	PAN2-204	3778	XM_021092872	ENSSSCP00000057836	1131 (aa)	XP_020948531	A0A287BMV3
ENSSSCT00000051504	PAN2-205	3602	-	ENSSSCP00000046751	1137 (aa)	-	A0A287AS15
ENSSSCT00000046573	PAN2-201	6079	XM_005655618	ENSSSCP00000040370	1197 (aa)	XP_005655675	A0A287A922
ENSSSCT00000040880	PAN2-202	7653	-	ENSSSCP00000057812	1197 (aa)	-	A0A287A922
ENSSSCT00000000424	PAN2-206	3600	-	ENSSSCP00000000418	1157 (aa)	-	F1SLY8
ENSSSCT00000055361	PAN2-203	5393	XM_001929293	ENSSSCP00000041335	1198 (aa)	XP_001929328	A0A287AC03

Gene Model

Click here to download ENSSSCG00000000393's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000393	PAN2	100	75.123	ENSAPOG00000022955	pan2	100	74.876	Acanthochromis_polyacanthus
ENSSSCG00000000393	PAN2	100	98.170	ENSAMEG00000003824	PAN2	100	98.170	Ailuropoda_melanoleuca
ENSSSCG00000000393	PAN2	94	85.424	ENSACIG00000013079	pan2	99	74.834	Amphilophus_citrinellus
ENSSSCG00000000393	PAN2	98	61.939	ENSACIG00000012858	PAN2	99	60.814	Amphilophus_citrinellus
ENSSSCG00000000393	PAN2	100	74.959	ENSAOCG00000022334	pan2	99	74.959	Amphiprion_ocellaris
ENSSSCG00000000393	PAN2	100	75.103	ENSAPEG00000022760	pan2	99	75.103	Amphiprion_percula
ENSSSCG00000000393	PAN2	99	75.207	ENSATEG00000024030	pan2	100	75.436	Anabas_testudineus
ENSSSCG00000000393	PAN2	99	85.053	ENSAPLG00000005195	PAN2	100	85.409	Anas_platyrhynchos
ENSSSCG00000000393	PAN2	100	84.417	ENSACAG00000007067	PAN2	100	84.417	Anolis_carolinensis
ENSSSCG00000000393	PAN2	100	97.830	ENSANAG00000036468	PAN2	100	97.830	Aotus_nancymaae
ENSSSCG00000000393	PAN2	100	75.309	ENSACLG00000023674	pan2	99	75.374	Astatotilapia_calliptera
ENSSSCG00000000393	PAN2	99	59.591	ENSACLG00000023821	pan2	99	59.480	Astatotilapia_calliptera
ENSSSCG00000000393	PAN2	99	74.730	ENSAMXG00000005418	pan2	98	74.730	Astyanax_mexicanus
ENSSSCG00000000393	PAN2	100	98.664	ENSBTAG00000004376	PAN2	100	98.664	Bos_taurus
ENSSSCG00000000393	PAN2	100	97.504	ENSCJAG00000011141	PAN2	100	97.504	Callithrix_jacchus
ENSSSCG00000000393	PAN2	100	97.913	ENSCAFG00000000119	PAN2	100	97.913	Canis_familiaris
ENSSSCG00000000393	PAN2	100	96.780	ENSCAFG00020024865	PAN2	100	96.780	Canis_lupus_dingo
ENSSSCG00000000393	PAN2	100	97.595	ENSCHIG00000026935	PAN2	100	97.595	Capra_hircus
ENSSSCG00000000393	PAN2	100	96.683	ENSTSYG00000006927	PAN2	100	97.025	Carlito_syrichta
ENSSSCG00000000393	PAN2	100	95.930	ENSCPOG00000014918	PAN2	100	95.930	Cavia_porcellus
ENSSSCG00000000393	PAN2	100	97.587	ENSCCAG00000036637	PAN2	100	97.587	Cebus_capucinus
ENSSSCG00000000393	PAN2	100	98.080	ENSCATG00000045076	PAN2	100	98.080	Cercocebus_atys
ENSSSCG00000000393	PAN2	100	95.764	ENSCLAG00000011700	PAN2	100	95.764	Chinchilla_lanigera
ENSSSCG00000000393	PAN2	100	97.421	ENSCSAG00000005173	PAN2	100	97.421	Chlorocebus_sabaeus
ENSSSCG00000000393	PAN2	100	85.583	ENSCPBG00000014029	PAN2	100	85.595	Chrysemys_picta_bellii
ENSSSCG00000000393	PAN2	91	46.329	ENSCSAVG00000003833	-	97	62.099	Ciona_savignyi
ENSSSCG00000000393	PAN2	100	95.262	ENSCANG00000017798	PAN2	100	95.262	Colobus_angolensis_palliatus
ENSSSCG00000000393	PAN2	100	96.244	ENSCGRG00001019707	Pan2	100	96.244	Cricetulus_griseus_chok1gshd
ENSSSCG00000000393	PAN2	100	95.108	ENSCGRG00000009996	Pan2	100	95.108	Cricetulus_griseus_crigri
ENSSSCG00000000393	PAN2	100	71.276	ENSCSEG00000021529	pan2	99	71.500	Cynoglossus_semilaevis
ENSSSCG00000000393	PAN2	100	75.062	ENSCVAG00000010197	pan2	100	75.062	Cyprinodon_variegatus
ENSSSCG00000000393	PAN2	100	74.422	ENSDARG00000074675	pan2	99	74.587	Danio_rerio
ENSSSCG00000000393	PAN2	100	96.995	ENSDNOG00000010940	PAN2	100	96.995	Dasypus_novemcinctus
ENSSSCG00000000393	PAN2	94	40.531	FBgn0033352	PAN2	96	41.509	Drosophila_melanogaster
ENSSSCG00000000393	PAN2	78	96.639	ENSETEG00000012041	PAN2	82	96.639	Echinops_telfairi
ENSSSCG00000000393	PAN2	98	61.532	ENSEBUG00000002773	pan2	98	61.532	Eptatretus_burgeri
ENSSSCG00000000393	PAN2	100	97.934	ENSEASG00005005235	PAN2	100	97.934	Equus_asinus_asinus
ENSSSCG00000000393	PAN2	100	98.915	ENSECAG00000019814	PAN2	100	98.915	Equus_caballus
ENSSSCG00000000393	PAN2	99	74.453	ENSELUG00000024604	pan2	99	74.526	Esox_lucius
ENSSSCG00000000393	PAN2	100	98.087	ENSFCAG00000012021	PAN2	100	98.087	Felis_catus
ENSSSCG00000000393	PAN2	99	84.272	ENSFALG00000000464	PAN2	98	84.286	Ficedula_albicollis
ENSSSCG00000000393	PAN2	100	95.854	ENSFDAG00000017104	PAN2	100	95.854	Fukomys_damarensis
ENSSSCG00000000393	PAN2	99	68.766	ENSFHEG00000000157	pan2	96	75.599	Fundulus_heteroclitus
ENSSSCG00000000393	PAN2	100	73.806	ENSGMOG00000007249	pan2	99	73.806	Gadus_morhua
ENSSSCG00000000393	PAN2	100	85.346	ENSGALG00000031512	PAN2	100	85.346	Gallus_gallus
ENSSSCG00000000393	PAN2	100	75.745	ENSGAFG00000000284	pan2	100	75.745	Gambusia_affinis
ENSSSCG00000000393	PAN2	100	74.403	ENSGACG00000010722	pan2	99	74.403	Gasterosteus_aculeatus
ENSSSCG00000000393	PAN2	100	85.250	ENSGAGG00000007868	PAN2	100	85.262	Gopherus_agassizii
ENSSSCG00000000393	PAN2	100	97.504	ENSGGOG00000009115	PAN2	100	97.504	Gorilla_gorilla
ENSSSCG00000000393	PAN2	100	75.083	ENSHBUG00000005234	pan2	99	75.291	Haplochromis_burtoni
ENSSSCG00000000393	PAN2	99	95.819	ENSHGLG00000005647	PAN2	99	95.819	Heterocephalus_glaber_female
ENSSSCG00000000393	PAN2	99	95.569	ENSHGLG00100014057	PAN2	99	95.569	Heterocephalus_glaber_male
ENSSSCG00000000393	PAN2	100	74.650	ENSHCOG00000007920	pan2	99	74.650	Hippocampus_comes
ENSSSCG00000000393	PAN2	100	74.855	ENSIPUG00000011065	PAN2	99	74.855	Ictalurus_punctatus
ENSSSCG00000000393	PAN2	94	96.835	ENSSTOG00000015974	PAN2	100	96.835	Ictidomys_tridecemlineatus
ENSSSCG00000000393	PAN2	99	96.393	ENSJJAG00000013044	Pan2	97	96.393	Jaculus_jaculus
ENSSSCG00000000393	PAN2	100	75.041	ENSKMAG00000006192	pan2	99	75.124	Kryptolebias_marmoratus
ENSSSCG00000000393	PAN2	94	81.597	ENSLBEG00000015763	pan2	99	80.392	Labrus_bergylta
ENSSSCG00000000393	PAN2	100	72.263	ENSLACG00000018694	PAN2	100	72.344	Latimeria_chalumnae
ENSSSCG00000000393	PAN2	100	76.296	ENSLOCG00000004333	pan2	99	76.461	Lepisosteus_oculatus
ENSSSCG00000000393	PAN2	100	95.677	ENSLAFG00000014873	PAN2	100	95.677	Loxodonta_africana
ENSSSCG00000000393	PAN2	100	97.830	ENSMFAG00000002293	PAN2	100	97.830	Macaca_fascicularis
ENSSSCG00000000393	PAN2	100	97.830	ENSMMUG00000013482	PAN2	100	97.830	Macaca_mulatta
ENSSSCG00000000393	PAN2	100	97.913	ENSMNEG00000033264	PAN2	100	97.913	Macaca_nemestrina
ENSSSCG00000000393	PAN2	100	97.997	ENSMLEG00000037388	PAN2	100	97.997	Mandrillus_leucophaeus
ENSSSCG00000000393	PAN2	100	75.947	ENSMAMG00000001624	pan2	100	75.947	Mastacembelus_armatus
ENSSSCG00000000393	PAN2	99	60.487	ENSMZEG00005026472	pan2	99	60.403	Maylandia_zebra
ENSSSCG00000000393	PAN2	100	75.309	ENSMZEG00005026462	pan2	99	75.374	Maylandia_zebra
ENSSSCG00000000393	PAN2	99	85.638	ENSMGAG00000001439	PAN2	100	85.948	Meleagris_gallopavo
ENSSSCG00000000393	PAN2	99	95.481	ENSMAUG00000012602	Pan2	99	95.481	Mesocricetus_auratus
ENSSSCG00000000393	PAN2	100	97.830	ENSMICG00000017661	PAN2	100	97.830	Microcebus_murinus
ENSSSCG00000000393	PAN2	100	95.242	ENSMOCG00000007191	Pan2	100	95.242	Microtus_ochrogaster
ENSSSCG00000000393	PAN2	99	75.000	ENSMMOG00000009313	pan2	98	75.187	Mola_mola
ENSSSCG00000000393	PAN2	100	75.678	ENSMALG00000013377	pan2	100	75.678	Monopterus_albus
ENSSSCG00000000393	PAN2	100	95.349	MGP_CAROLIEiJ_G0015930	Pan2	100	95.349	Mus_caroli
ENSSSCG00000000393	PAN2	100	95.739	ENSMUSG00000005682	Pan2	100	95.739	Mus_musculus
ENSSSCG00000000393	PAN2	100	95.349	MGP_PahariEiJ_G0031154	Pan2	100	95.349	Mus_pahari
ENSSSCG00000000393	PAN2	100	95.743	MGP_SPRETEiJ_G0016755	Pan2	100	95.743	Mus_spretus
ENSSSCG00000000393	PAN2	100	98.748	ENSMPUG00000001383	PAN2	100	98.748	Mustela_putorius_furo
ENSSSCG00000000393	PAN2	100	97.412	ENSMLUG00000006737	PAN2	100	97.412	Myotis_lucifugus
ENSSSCG00000000393	PAN2	100	96.423	ENSNGAG00000007930	Pan2	100	96.423	Nannospalax_galili
ENSSSCG00000000393	PAN2	91	92.361	ENSNBRG00000006585	pan2	99	86.818	Neolamprologus_brichardi
ENSSSCG00000000393	PAN2	100	94.203	ENSNLEG00000017499	PAN2	100	97.941	Nomascus_leucogenys
ENSSSCG00000000393	PAN2	100	92.263	ENSMEUG00000010125	PAN2	100	92.263	Notamacropus_eugenii
ENSSSCG00000000393	PAN2	100	96.266	ENSOPRG00000001468	PAN2	100	96.266	Ochotona_princeps
ENSSSCG00000000393	PAN2	100	95.443	ENSODEG00000007203	PAN2	100	95.443	Octodon_degus
ENSSSCG00000000393	PAN2	100	74.980	ENSONIG00000016732	pan2	100	74.980	Oreochromis_niloticus
ENSSSCG00000000393	PAN2	81	74.022	ENSOANG00000005151	PAN2	99	74.122	Ornithorhynchus_anatinus
ENSSSCG00000000393	PAN2	100	96.432	ENSOCUG00000007227	PAN2	100	96.432	Oryctolagus_cuniculus
ENSSSCG00000000393	PAN2	100	74.650	ENSORLG00000015195	pan2	100	74.650	Oryzias_latipes
ENSSSCG00000000393	PAN2	100	74.733	ENSORLG00020000277	pan2	100	74.733	Oryzias_latipes_hni
ENSSSCG00000000393	PAN2	100	74.650	ENSORLG00015005193	pan2	100	74.650	Oryzias_latipes_hsok
ENSSSCG00000000393	PAN2	100	75.144	ENSOMEG00000022087	pan2	98	78.756	Oryzias_melastigma
ENSSSCG00000000393	PAN2	100	96.437	ENSOGAG00000030620	PAN2	100	96.437	Otolemur_garnettii
ENSSSCG00000000393	PAN2	100	98.419	ENSOARG00000009379	PAN2	100	98.419	Ovis_aries
ENSSSCG00000000393	PAN2	100	97.913	ENSPPAG00000001208	PAN2	100	97.913	Pan_paniscus
ENSSSCG00000000393	PAN2	100	98.170	ENSPPRG00000021586	PAN2	100	98.170	Panthera_pardus
ENSSSCG00000000393	PAN2	100	94.210	ENSPTIG00000012494	PAN2	100	94.210	Panthera_tigris_altaica
ENSSSCG00000000393	PAN2	100	97.913	ENSPTRG00000052054	PAN2	100	97.913	Pan_troglodytes
ENSSSCG00000000393	PAN2	92	97.744	ENSPANG00000018906	PAN2	100	97.744	Papio_anubis
ENSSSCG00000000393	PAN2	100	75.185	ENSPKIG00000003973	pan2	99	75.185	Paramormyrops_kingsleyae
ENSSSCG00000000393	PAN2	100	82.294	ENSPSIG00000003267	PAN2	100	82.294	Pelodiscus_sinensis
ENSSSCG00000000393	PAN2	100	74.421	ENSPMGG00000023186	pan2	100	74.421	Periophthalmus_magnuspinnatus
ENSSSCG00000000393	PAN2	100	95.025	ENSPEMG00000018505	Pan2	100	95.025	Peromyscus_maniculatus_bairdii
ENSSSCG00000000393	PAN2	91	68.950	ENSPMAG00000004731	pan2	100	68.950	Petromyzon_marinus
ENSSSCG00000000393	PAN2	100	92.423	ENSPCIG00000024643	PAN2	100	92.423	Phascolarctos_cinereus
ENSSSCG00000000393	PAN2	100	75.288	ENSPFOG00000008392	pan2	99	75.288	Poecilia_formosa
ENSSSCG00000000393	PAN2	100	75.206	ENSPLAG00000009198	pan2	99	75.206	Poecilia_latipinna
ENSSSCG00000000393	PAN2	100	75.371	ENSPMEG00000001484	pan2	100	75.353	Poecilia_mexicana
ENSSSCG00000000393	PAN2	100	75.331	ENSPREG00000000900	pan2	100	75.331	Poecilia_reticulata
ENSSSCG00000000393	PAN2	90	98.289	ENSPPYG00000004656	PAN2	100	98.289	Pongo_abelii
ENSSSCG00000000393	PAN2	92	97.014	ENSPCAG00000011047	PAN2	99	97.014	Procavia_capensis
ENSSSCG00000000393	PAN2	100	97.663	ENSPCOG00000018263	PAN2	100	97.663	Propithecus_coquereli
ENSSSCG00000000393	PAN2	94	97.333	ENSPVAG00000007591	PAN2	94	97.333	Pteropus_vampyrus
ENSSSCG00000000393	PAN2	99	75.458	ENSPNYG00000002629	pan2	99	75.458	Pundamilia_nyererei
ENSSSCG00000000393	PAN2	100	76.281	ENSPNAG00000027140	pan2	99	76.281	Pygocentrus_nattereri
ENSSSCG00000000393	PAN2	100	95.405	ENSRNOG00000032441	Pan2	100	95.405	Rattus_norvegicus
ENSSSCG00000000393	PAN2	100	97.830	ENSRBIG00000029591	PAN2	100	97.830	Rhinopithecus_bieti
ENSSSCG00000000393	PAN2	100	97.746	ENSRROG00000041950	PAN2	100	97.746	Rhinopithecus_roxellana
ENSSSCG00000000393	PAN2	100	97.830	ENSSBOG00000027343	PAN2	100	97.830	Saimiri_boliviensis_boliviensis
ENSSSCG00000000393	PAN2	92	91.398	ENSSHAG00000000122	PAN2	100	92.185	Sarcophilus_harrisii
ENSSSCG00000000393	PAN2	99	76.076	ENSSFOG00015017740	pan2	99	76.076	Scleropages_formosus
ENSSSCG00000000393	PAN2	100	74.344	ENSSMAG00000020901	pan2	100	74.340	Scophthalmus_maximus
ENSSSCG00000000393	PAN2	100	75.369	ENSSDUG00000001840	pan2	99	75.596	Seriola_dumerili
ENSSSCG00000000393	PAN2	100	75.475	ENSSLDG00000013866	pan2	100	75.475	Seriola_lalandi_dorsalis
ENSSSCG00000000393	PAN2	92	96.296	ENSSARG00000013350	PAN2	92	96.296	Sorex_araneus
ENSSSCG00000000393	PAN2	92	85.081	ENSSPUG00000004270	PAN2	99	85.095	Sphenodon_punctatus
ENSSSCG00000000393	PAN2	100	75.205	ENSSPAG00000019970	pan2	100	75.123	Stegastes_partitus
ENSSSCG00000000393	PAN2	100	75.000	ENSTRUG00000014260	pan2	99	75.000	Takifugu_rubripes
ENSSSCG00000000393	PAN2	100	75.103	ENSTNIG00000012537	pan2	99	75.164	Tetraodon_nigroviridis
ENSSSCG00000000393	PAN2	80	97.997	ENSTTRG00000007150	PAN2	80	97.997	Tursiops_truncatus
ENSSSCG00000000393	PAN2	100	98.254	ENSUAMG00000026522	PAN2	100	98.254	Ursus_americanus
ENSSSCG00000000393	PAN2	100	97.929	ENSUMAG00000017020	PAN2	100	97.929	Ursus_maritimus
ENSSSCG00000000393	PAN2	82	95.897	ENSVPAG00000007309	PAN2	85	97.537	Vicugna_pacos
ENSSSCG00000000393	PAN2	100	97.913	ENSVVUG00000021878	PAN2	100	97.913	Vulpes_vulpes
ENSSSCG00000000393	PAN2	99	79.118	ENSXETG00000009434	pan2	100	79.325	Xenopus_tropicalis
ENSSSCG00000000393	PAN2	100	71.192	ENSXCOG00000014391	pan2	100	71.192	Xiphophorus_couchianus
ENSSSCG00000000393	PAN2	100	75.206	ENSXMAG00000011661	pan2	100	75.083	Xiphophorus_maculatus