EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000000461 (Gene tree)
Gene ID: 100156985
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerases I%2C II%2C and III subunit RPABC5-like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 204 bases
Position: chr5:28231124-28231327
Accession: 100156985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000000492	RNA_pol_N	PF01194.17	1.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000000499	-	204	XM_005663951	ENSSSCP00000000492	67 (aa)	XP_005664008	F1SKC0

Gene Model

Click here to download ENSSSCG00000000461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000000461	-	100	65.672	ENSSSCG00000012839	-	100	65.672
ENSSSCG00000000461	-	100	83.582	ENSSSCG00000033068	-	100	83.582
ENSSSCG00000000461	-	100	44.776	ENSSSCG00000039389	-	100	44.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000461	-	100	83.582	ENSG00000177700	POLR2L	100	83.582	Homo_sapiens
ENSSSCG00000000461	-	100	82.090	ENSAPOG00000011116	polr2l	100	82.090	Acanthochromis_polyacanthus
ENSSSCG00000000461	-	100	82.090	ENSACIG00000005514	polr2l	100	82.090	Amphilophus_citrinellus
ENSSSCG00000000461	-	100	82.090	ENSAOCG00000012342	polr2l	100	82.090	Amphiprion_ocellaris
ENSSSCG00000000461	-	100	82.090	ENSAPEG00000015365	polr2l	100	82.090	Amphiprion_percula
ENSSSCG00000000461	-	100	82.090	ENSATEG00000007953	polr2l	100	82.090	Anabas_testudineus
ENSSSCG00000000461	-	100	83.582	ENSACAG00000015509	POLR2L	100	83.582	Anolis_carolinensis
ENSSSCG00000000461	-	100	83.582	ENSANAG00000022996	POLR2L	100	83.582	Aotus_nancymaae
ENSSSCG00000000461	-	100	82.090	ENSACLG00000026685	polr2l	100	82.090	Astatotilapia_calliptera
ENSSSCG00000000461	-	100	82.090	ENSAMXG00000037735	polr2l	100	82.090	Astyanax_mexicanus
ENSSSCG00000000461	-	100	83.582	ENSBTAG00000031061	POLR2L	100	83.582	Bos_taurus
ENSSSCG00000000461	-	100	68.657	WBGene00021347	rpb-10	100	68.657	Caenorhabditis_elegans
ENSSSCG00000000461	-	100	83.582	ENSCJAG00000041101	POLR2L	100	83.582	Callithrix_jacchus
ENSSSCG00000000461	-	100	83.582	ENSCAFG00020017621	POLR2L	100	83.582	Canis_lupus_dingo
ENSSSCG00000000461	-	100	83.582	ENSCHIG00000023006	POLR2L	100	83.582	Capra_hircus
ENSSSCG00000000461	-	100	59.701	ENSTSYG00000027353	-	100	59.701	Carlito_syrichta
ENSSSCG00000000461	-	100	83.582	ENSCPOG00000033252	POLR2L	100	83.582	Cavia_porcellus
ENSSSCG00000000461	-	100	83.582	ENSCCAG00000035630	POLR2L	100	83.582	Cebus_capucinus
ENSSSCG00000000461	-	100	83.582	ENSCATG00000041490	POLR2L	100	83.582	Cercocebus_atys
ENSSSCG00000000461	-	94	66.154	ENSCATG00000034571	-	88	66.154	Cercocebus_atys
ENSSSCG00000000461	-	100	83.582	ENSCLAG00000002071	POLR2L	100	83.582	Chinchilla_lanigera
ENSSSCG00000000461	-	100	83.582	ENSCSAG00000010528	POLR2L	100	83.582	Chlorocebus_sabaeus
ENSSSCG00000000461	-	100	83.582	ENSCPBG00000007106	POLR2L	100	83.582	Chrysemys_picta_bellii
ENSSSCG00000000461	-	100	73.134	ENSCSAVG00000006078	-	100	73.134	Ciona_savignyi
ENSSSCG00000000461	-	100	83.582	ENSCANG00000043116	POLR2L	100	83.582	Colobus_angolensis_palliatus
ENSSSCG00000000461	-	100	82.090	ENSCGRG00001003398	-	87	82.090	Cricetulus_griseus_chok1gshd
ENSSSCG00000000461	-	100	83.582	ENSCGRG00001023078	-	100	83.582	Cricetulus_griseus_chok1gshd
ENSSSCG00000000461	-	100	82.090	ENSCGRG00000019284	-	87	82.090	Cricetulus_griseus_crigri
ENSSSCG00000000461	-	100	83.582	ENSCGRG00000018042	-	100	83.582	Cricetulus_griseus_crigri
ENSSSCG00000000461	-	100	82.090	ENSCSEG00000001959	polr2l	100	82.090	Cynoglossus_semilaevis
ENSSSCG00000000461	-	100	82.090	ENSCVAG00000007386	polr2l	100	82.090	Cyprinodon_variegatus
ENSSSCG00000000461	-	100	82.090	ENSDARG00000058349	polr2l	100	82.090	Danio_rerio
ENSSSCG00000000461	-	94	65.079	ENSDNOG00000049434	-	98	65.079	Dasypus_novemcinctus
ENSSSCG00000000461	-	100	76.119	FBgn0039218	Rpb10	100	76.119	Drosophila_melanogaster
ENSSSCG00000000461	-	100	83.582	ENSETEG00000012556	POLR2L	100	83.582	Echinops_telfairi
ENSSSCG00000000461	-	100	79.104	ENSEBUG00000010353	-	100	79.104	Eptatretus_burgeri
ENSSSCG00000000461	-	100	79.104	ENSEBUG00000000392	-	100	79.104	Eptatretus_burgeri
ENSSSCG00000000461	-	100	61.194	ENSEASG00005017228	-	85	61.194	Equus_asinus_asinus
ENSSSCG00000000461	-	100	83.582	ENSEASG00005007478	POLR2L	100	83.582	Equus_asinus_asinus
ENSSSCG00000000461	-	100	83.582	ENSECAG00000031030	POLR2L	100	83.582	Equus_caballus
ENSSSCG00000000461	-	100	59.701	ENSECAG00000001180	POLR2L	85	59.701	Equus_caballus
ENSSSCG00000000461	-	100	67.164	ENSEEUG00000015795	-	100	67.164	Erinaceus_europaeus
ENSSSCG00000000461	-	100	83.582	ENSELUG00000009612	RPAB5	100	83.582	Esox_lucius
ENSSSCG00000000461	-	100	83.582	ENSFCAG00000043112	POLR2L	100	83.582	Felis_catus
ENSSSCG00000000461	-	100	83.582	ENSFALG00000012058	POLR2L	100	83.582	Ficedula_albicollis
ENSSSCG00000000461	-	100	83.582	ENSFDAG00000021533	POLR2L	100	83.582	Fukomys_damarensis
ENSSSCG00000000461	-	100	82.090	ENSFHEG00000019804	polr2l	100	82.090	Fundulus_heteroclitus
ENSSSCG00000000461	-	100	83.582	ENSGMOG00000001279	polr2l	100	83.582	Gadus_morhua
ENSSSCG00000000461	-	100	83.582	ENSGALG00000006841	POLR2L	100	83.582	Gallus_gallus
ENSSSCG00000000461	-	100	82.090	ENSGAFG00000013789	polr2l	100	82.090	Gambusia_affinis
ENSSSCG00000000461	-	100	83.582	ENSGAGG00000017751	-	51	83.582	Gopherus_agassizii
ENSSSCG00000000461	-	100	80.597	ENSGAGG00000006577	POLR2L	100	80.597	Gopherus_agassizii
ENSSSCG00000000461	-	100	83.582	ENSGGOG00000010821	POLR2L	100	83.582	Gorilla_gorilla
ENSSSCG00000000461	-	99	63.636	ENSGGOG00000040273	-	100	63.636	Gorilla_gorilla
ENSSSCG00000000461	-	100	82.090	ENSHBUG00000013767	polr2l	100	82.090	Haplochromis_burtoni
ENSSSCG00000000461	-	100	83.582	ENSHGLG00000007095	POLR2L	100	83.582	Heterocephalus_glaber_female
ENSSSCG00000000461	-	100	83.582	ENSHGLG00100010399	POLR2L	100	83.582	Heterocephalus_glaber_male
ENSSSCG00000000461	-	100	80.597	ENSHCOG00000008730	polr2l	100	80.597	Hippocampus_comes
ENSSSCG00000000461	-	100	80.597	ENSIPUG00000017431	polr2l	100	80.597	Ictalurus_punctatus
ENSSSCG00000000461	-	97	66.667	ENSSTOG00000022797	-	80	66.667	Ictidomys_tridecemlineatus
ENSSSCG00000000461	-	100	73.134	ENSJJAG00000011334	-	100	73.134	Jaculus_jaculus
ENSSSCG00000000461	-	100	83.582	ENSJJAG00000011194	-	100	83.582	Jaculus_jaculus
ENSSSCG00000000461	-	100	82.090	ENSKMAG00000003267	polr2l	100	82.090	Kryptolebias_marmoratus
ENSSSCG00000000461	-	100	80.597	ENSLBEG00000000928	polr2l	100	80.597	Labrus_bergylta
ENSSSCG00000000461	-	100	80.597	ENSLACG00000017570	POLR2L	100	80.597	Latimeria_chalumnae
ENSSSCG00000000461	-	100	83.582	ENSMFAG00000001554	POLR2L	100	83.582	Macaca_fascicularis
ENSSSCG00000000461	-	100	83.582	ENSMNEG00000026729	POLR2L	100	83.582	Macaca_nemestrina
ENSSSCG00000000461	-	94	69.231	ENSMLEG00000042017	-	88	69.231	Mandrillus_leucophaeus
ENSSSCG00000000461	-	100	80.597	ENSMAMG00000021937	polr2l	100	80.597	Mastacembelus_armatus
ENSSSCG00000000461	-	100	82.090	ENSMZEG00005000960	polr2l	100	82.090	Maylandia_zebra
ENSSSCG00000000461	-	100	83.582	ENSMGAG00000011610	POLR2L	100	83.582	Meleagris_gallopavo
ENSSSCG00000000461	-	100	83.582	ENSMAUG00000019023	Polr2l	100	83.582	Mesocricetus_auratus
ENSSSCG00000000461	-	100	83.582	ENSMICG00000047069	POLR2L	100	83.582	Microcebus_murinus
ENSSSCG00000000461	-	100	83.582	ENSMOCG00000021062	Polr2l	100	83.582	Microtus_ochrogaster
ENSSSCG00000000461	-	100	82.090	ENSMMOG00000017276	polr2l	100	82.090	Mola_mola
ENSSSCG00000000461	-	100	80.597	ENSMALG00000018890	polr2l	100	80.597	Monopterus_albus
ENSSSCG00000000461	-	100	83.582	MGP_CAROLIEiJ_G0030702	Polr2l	100	83.582	Mus_caroli
ENSSSCG00000000461	-	100	83.582	ENSMUSG00000038489	Polr2l	100	83.582	Mus_musculus
ENSSSCG00000000461	-	100	83.582	MGP_PahariEiJ_G0013901	Polr2l	100	83.582	Mus_pahari
ENSSSCG00000000461	-	100	82.090	ENSMLUG00000005362	POLR2L	100	82.090	Myotis_lucifugus
ENSSSCG00000000461	-	100	83.582	ENSNGAG00000015204	-	100	83.582	Nannospalax_galili
ENSSSCG00000000461	-	100	74.627	ENSNGAG00000014203	-	100	74.627	Nannospalax_galili
ENSSSCG00000000461	-	100	82.090	ENSNBRG00000013837	polr2l	100	82.090	Neolamprologus_brichardi
ENSSSCG00000000461	-	100	83.582	ENSNLEG00000008683	POLR2L	100	83.582	Nomascus_leucogenys
ENSSSCG00000000461	-	100	83.582	ENSMEUG00000003938	POLR2L	100	83.582	Notamacropus_eugenii
ENSSSCG00000000461	-	100	80.597	ENSOPRG00000001702	-	100	80.597	Ochotona_princeps
ENSSSCG00000000461	-	100	82.090	ENSOPRG00000009675	-	100	82.090	Ochotona_princeps
ENSSSCG00000000461	-	100	83.582	ENSODEG00000016905	-	100	83.582	Octodon_degus
ENSSSCG00000000461	-	100	73.134	ENSODEG00000014372	-	100	73.134	Octodon_degus
ENSSSCG00000000461	-	100	82.090	ENSORLG00000027182	polr2l	99	82.090	Oryzias_latipes
ENSSSCG00000000461	-	100	82.090	ENSORLG00020012637	polr2l	99	82.090	Oryzias_latipes_hni
ENSSSCG00000000461	-	100	82.090	ENSORLG00015011064	polr2l	99	82.090	Oryzias_latipes_hsok
ENSSSCG00000000461	-	100	82.090	ENSOMEG00000020485	polr2l	99	82.090	Oryzias_melastigma
ENSSSCG00000000461	-	100	83.582	ENSOGAG00000024166	POLR2L	100	83.582	Otolemur_garnettii
ENSSSCG00000000461	-	52	88.571	ENSPTIG00000012764	POLR2L	52	88.571	Panthera_tigris_altaica
ENSSSCG00000000461	-	100	83.582	ENSPTRG00000052712	POLR2L	100	83.582	Pan_troglodytes
ENSSSCG00000000461	-	100	83.582	ENSPANG00000032375	POLR2L	100	83.582	Papio_anubis
ENSSSCG00000000461	-	100	82.090	ENSPKIG00000017973	polr2l	84	82.090	Paramormyrops_kingsleyae
ENSSSCG00000000461	-	100	83.582	ENSPSIG00000013867	POLR2L	100	83.582	Pelodiscus_sinensis
ENSSSCG00000000461	-	100	77.612	ENSPMGG00000004854	polr2l	100	77.612	Periophthalmus_magnuspinnatus
ENSSSCG00000000461	-	100	80.597	ENSPEMG00000014839	-	100	80.597	Peromyscus_maniculatus_bairdii
ENSSSCG00000000461	-	100	83.582	ENSPCIG00000008250	-	100	83.582	Phascolarctos_cinereus
ENSSSCG00000000461	-	100	64.179	ENSPCIG00000011752	-	100	64.179	Phascolarctos_cinereus
ENSSSCG00000000461	-	100	82.090	ENSPFOG00000004650	polr2l	100	82.090	Poecilia_formosa
ENSSSCG00000000461	-	100	82.090	ENSPLAG00000010698	polr2l	100	82.090	Poecilia_latipinna
ENSSSCG00000000461	-	100	82.090	ENSPMEG00000015438	polr2l	100	82.090	Poecilia_mexicana
ENSSSCG00000000461	-	100	82.090	ENSPREG00000022948	polr2l	100	82.090	Poecilia_reticulata
ENSSSCG00000000461	-	100	79.104	ENSPPYG00000029850	POLR2L	100	79.104	Pongo_abelii
ENSSSCG00000000461	-	100	83.582	ENSPCAG00000011644	POLR2L	100	83.582	Procavia_capensis
ENSSSCG00000000461	-	100	83.582	ENSPVAG00000014859	POLR2L	100	83.582	Pteropus_vampyrus
ENSSSCG00000000461	-	100	82.090	ENSPNYG00000007348	polr2l	100	82.090	Pundamilia_nyererei
ENSSSCG00000000461	-	100	82.090	ENSPNAG00000015066	polr2l	100	82.090	Pygocentrus_nattereri
ENSSSCG00000000461	-	100	80.597	ENSRNOG00000023805	AABR07042789.1	100	80.597	Rattus_norvegicus
ENSSSCG00000000461	-	100	83.582	ENSRBIG00000033751	POLR2L	100	83.582	Rhinopithecus_bieti
ENSSSCG00000000461	-	100	83.582	ENSRROG00000045437	-	100	83.582	Rhinopithecus_roxellana
ENSSSCG00000000461	-	100	83.582	ENSRROG00000001154	-	100	83.582	Rhinopithecus_roxellana
ENSSSCG00000000461	-	100	58.824	YOR210W	RPB10	97	58.824	Saccharomyces_cerevisiae
ENSSSCG00000000461	-	100	62.687	ENSSBOG00000026975	-	100	62.687	Saimiri_boliviensis_boliviensis
ENSSSCG00000000461	-	100	79.104	ENSSFOG00015010252	polr2l	100	79.104	Scleropages_formosus
ENSSSCG00000000461	-	100	82.090	ENSSMAG00000021392	polr2l	100	82.090	Scophthalmus_maximus
ENSSSCG00000000461	-	100	80.597	ENSSDUG00000008725	polr2l	100	80.597	Seriola_dumerili
ENSSSCG00000000461	-	100	80.597	ENSSLDG00000024029	polr2l	100	80.597	Seriola_lalandi_dorsalis
ENSSSCG00000000461	-	100	83.582	ENSSARG00000007627	POLR2L	100	83.582	Sorex_araneus
ENSSSCG00000000461	-	100	74.627	ENSSPUG00000005252	POLR2L	69	74.627	Sphenodon_punctatus
ENSSSCG00000000461	-	100	82.090	ENSSPAG00000019322	polr2l	100	82.090	Stegastes_partitus
ENSSSCG00000000461	-	100	71.642	ENSTGUG00000009757	POLR2L	100	71.642	Taeniopygia_guttata
ENSSSCG00000000461	-	100	80.597	ENSTRUG00000017292	polr2l	100	80.597	Takifugu_rubripes
ENSSSCG00000000461	-	100	80.597	ENSTTRG00000012496	POLR2L	100	80.597	Tursiops_truncatus
ENSSSCG00000000461	-	100	59.701	ENSUAMG00000016335	-	63	59.701	Ursus_americanus
ENSSSCG00000000461	-	100	83.582	ENSUAMG00000024755	-	100	83.582	Ursus_americanus
ENSSSCG00000000461	-	100	83.582	ENSVVUG00000000205	POLR2L	100	83.582	Vulpes_vulpes
ENSSSCG00000000461	-	100	83.582	ENSXETG00000025768	polr2l.1	100	83.582	Xenopus_tropicalis
ENSSSCG00000000461	-	100	80.597	ENSXETG00000002878	polr2l.2	100	80.597	Xenopus_tropicalis
ENSSSCG00000000461	-	100	82.090	ENSXMAG00000007260	polr2l	100	82.090	Xiphophorus_maculatus