EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000000466 (Gene tree)
Gene ID: 100511016
Gene Symbol: XPOT
Alias: XPO3
Full Name: exportin for tRNA
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 158423 bases
Position: chr5:28716909-28875331
Accession: 100511016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000047141	Xpo1	PF08389.12	5.6e-42	1	1
ENSSSCP00000038990	Xpo1	PF08389.12	6e-42	1	1
ENSSSCP00000000497	Xpo1	PF08389.12	6.7e-42	1	1
ENSSSCP00000047141	IBN_N	PF03810.19	1.1e-05	1	1
ENSSSCP00000000497	IBN_N	PF03810.19	1.7e-05	1	1
ENSSSCP00000038990	IBN_N	PF03810.19	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000000504	XPOT-203	2387	-	ENSSSCP00000000497	644 (aa)	-	F1SKB5
ENSSSCT00000065895	XPOT-202	4098	-	ENSSSCP00000047141	507 (aa)	-	A0A287ASR7
ENSSSCT00000049535	XPOT-201	4114	XM_021091940	ENSSSCP00000038990	962 (aa)	XP_020947599	A0A287A547

Gene Model

Click here to download ENSSSCG00000000466's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000466's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000466	XPOT	100	98.960	ENSG00000184575	XPOT	100	98.960	Homo_sapiens
ENSSSCG00000000466	XPOT	99	80.125	ENSAPOG00000001362	xpot	99	80.125	Acanthochromis_polyacanthus
ENSSSCG00000000466	XPOT	100	98.753	ENSAMEG00000018109	XPOT	100	98.753	Ailuropoda_melanoleuca
ENSSSCG00000000466	XPOT	99	79.895	ENSACIG00000009016	xpot	100	79.895	Amphilophus_citrinellus
ENSSSCG00000000466	XPOT	99	79.813	ENSAOCG00000005711	xpot	99	79.813	Amphiprion_ocellaris
ENSSSCG00000000466	XPOT	96	78.557	ENSAPEG00000024714	xpot	100	77.739	Amphiprion_percula
ENSSSCG00000000466	XPOT	99	79.813	ENSAPEG00000024660	XPOT	99	79.888	Amphiprion_percula
ENSSSCG00000000466	XPOT	99	79.917	ENSATEG00000000675	xpot	99	79.917	Anabas_testudineus
ENSSSCG00000000466	XPOT	100	93.971	ENSAPLG00000008073	XPOT	100	93.971	Anas_platyrhynchos
ENSSSCG00000000466	XPOT	100	90.644	ENSACAG00000003154	XPOT	100	90.644	Anolis_carolinensis
ENSSSCG00000000466	XPOT	96	87.835	ENSANAG00000029914	-	100	80.146	Aotus_nancymaae
ENSSSCG00000000466	XPOT	99	82.759	ENSANAG00000032778	-	99	88.466	Aotus_nancymaae
ENSSSCG00000000466	XPOT	99	79.501	ENSACLG00000008404	xpot	99	79.501	Astatotilapia_calliptera
ENSSSCG00000000466	XPOT	99	79.292	ENSAMXG00000013542	xpot	99	79.292	Astyanax_mexicanus
ENSSSCG00000000466	XPOT	100	99.064	ENSBTAG00000026962	XPOT	100	99.064	Bos_taurus
ENSSSCG00000000466	XPOT	100	98.649	ENSCJAG00000014762	XPOT	95	98.649	Callithrix_jacchus
ENSSSCG00000000466	XPOT	100	99.272	ENSCAFG00000000352	XPOT	100	99.272	Canis_familiaris
ENSSSCG00000000466	XPOT	100	99.272	ENSCAFG00020019527	XPOT	100	99.272	Canis_lupus_dingo
ENSSSCG00000000466	XPOT	100	99.272	ENSCHIG00000018310	XPOT	100	99.272	Capra_hircus
ENSSSCG00000000466	XPOT	100	97.297	ENSTSYG00000008852	XPOT	100	97.297	Carlito_syrichta
ENSSSCG00000000466	XPOT	88	89.305	ENSCAPG00000001620	XPOT	96	89.305	Cavia_aperea
ENSSSCG00000000466	XPOT	100	98.129	ENSCPOG00000027042	XPOT	100	98.129	Cavia_porcellus
ENSSSCG00000000466	XPOT	96	98.763	ENSCCAG00000035803	XPOT	97	98.551	Cebus_capucinus
ENSSSCG00000000466	XPOT	99	73.257	ENSCATG00000039901	-	99	73.257	Cercocebus_atys
ENSSSCG00000000466	XPOT	100	99.064	ENSCATG00000037826	XPOT	100	99.064	Cercocebus_atys
ENSSSCG00000000466	XPOT	100	98.233	ENSCLAG00000011382	XPOT	100	98.233	Chinchilla_lanigera
ENSSSCG00000000466	XPOT	100	99.064	ENSCSAG00000004475	XPOT	100	99.064	Chlorocebus_sabaeus
ENSSSCG00000000466	XPOT	77	98.758	ENSCHOG00000000288	-	68	99.169	Choloepus_hoffmanni
ENSSSCG00000000466	XPOT	100	93.139	ENSCPBG00000001003	XPOT	100	93.139	Chrysemys_picta_bellii
ENSSSCG00000000466	XPOT	99	45.207	ENSCSAVG00000001681	-	99	45.207	Ciona_savignyi
ENSSSCG00000000466	XPOT	98	70.457	ENSCANG00000030844	-	100	71.307	Colobus_angolensis_palliatus
ENSSSCG00000000466	XPOT	100	98.960	ENSCANG00000033371	XPOT	100	98.960	Colobus_angolensis_palliatus
ENSSSCG00000000466	XPOT	100	95.634	ENSCGRG00001016835	Xpot	100	95.634	Cricetulus_griseus_chok1gshd
ENSSSCG00000000466	XPOT	100	95.119	ENSCGRG00000000577	Xpot	100	95.119	Cricetulus_griseus_crigri
ENSSSCG00000000466	XPOT	99	78.460	ENSCSEG00000003973	xpot	99	78.460	Cynoglossus_semilaevis
ENSSSCG00000000466	XPOT	99	79.396	ENSCVAG00000020453	xpot	99	79.396	Cyprinodon_variegatus
ENSSSCG00000000466	XPOT	99	78.460	ENSDARG00000099652	xpot	99	78.460	Danio_rerio
ENSSSCG00000000466	XPOT	100	98.337	ENSDORG00000000259	Xpot	100	98.337	Dipodomys_ordii
ENSSSCG00000000466	XPOT	63	98.261	ENSETEG00000002981	-	55	98.261	Echinops_telfairi
ENSSSCG00000000466	XPOT	91	58.916	ENSEBUG00000007650	xpot	99	59.324	Eptatretus_burgeri
ENSSSCG00000000466	XPOT	100	98.545	ENSEASG00005007701	XPOT	98	98.545	Equus_asinus_asinus
ENSSSCG00000000466	XPOT	100	98.545	ENSECAG00000018336	XPOT	94	96.996	Equus_caballus
ENSSSCG00000000466	XPOT	86	99.340	ENSEEUG00000009700	XPOT	86	99.340	Erinaceus_europaeus
ENSSSCG00000000466	XPOT	86	73.624	ENSELUG00000009337	xpot	96	74.725	Esox_lucius
ENSSSCG00000000466	XPOT	100	99.168	ENSFCAG00000012360	XPOT	100	99.168	Felis_catus
ENSSSCG00000000466	XPOT	100	93.971	ENSFALG00000009938	XPOT	100	93.971	Ficedula_albicollis
ENSSSCG00000000466	XPOT	99	97.914	ENSFDAG00000012640	XPOT	99	97.914	Fukomys_damarensis
ENSSSCG00000000466	XPOT	83	79.149	ENSFHEG00000009648	xpot	99	79.149	Fundulus_heteroclitus
ENSSSCG00000000466	XPOT	93	77.372	ENSGMOG00000018888	xpot	93	77.372	Gadus_morhua
ENSSSCG00000000466	XPOT	100	93.971	ENSGALG00000009835	XPOT	100	93.971	Gallus_gallus
ENSSSCG00000000466	XPOT	99	79.084	ENSGAFG00000004150	xpot	99	79.084	Gambusia_affinis
ENSSSCG00000000466	XPOT	99	74.613	ENSGACG00000000589	xpot	99	74.613	Gasterosteus_aculeatus
ENSSSCG00000000466	XPOT	100	92.931	ENSGAGG00000022917	XPOT	100	92.931	Gopherus_agassizii
ENSSSCG00000000466	XPOT	100	98.960	ENSGGOG00000006089	XPOT	100	98.960	Gorilla_gorilla
ENSSSCG00000000466	XPOT	91	92.888	ENSGGOG00000027170	-	95	87.595	Gorilla_gorilla
ENSSSCG00000000466	XPOT	99	79.686	ENSHBUG00000020681	xpot	99	79.605	Haplochromis_burtoni
ENSSSCG00000000466	XPOT	99	98.115	ENSHGLG00000005833	XPOT	99	98.115	Heterocephalus_glaber_female
ENSSSCG00000000466	XPOT	100	98.129	ENSHGLG00100000810	XPOT	100	98.129	Heterocephalus_glaber_male
ENSSSCG00000000466	XPOT	99	72.216	ENSHCOG00000006415	xpot	99	72.216	Hippocampus_comes
ENSSSCG00000000466	XPOT	100	78.920	ENSIPUG00000015271	xpot	99	79.084	Ictalurus_punctatus
ENSSSCG00000000466	XPOT	100	98.960	ENSSTOG00000021805	XPOT	100	98.960	Ictidomys_tridecemlineatus
ENSSSCG00000000466	XPOT	99	83.125	ENSJJAG00000014767	-	100	83.646	Jaculus_jaculus
ENSSSCG00000000466	XPOT	99	94.974	ENSJJAG00000019671	-	99	94.974	Jaculus_jaculus
ENSSSCG00000000466	XPOT	96	78.763	ENSKMAG00000019126	xpot	100	79.693	Kryptolebias_marmoratus
ENSSSCG00000000466	XPOT	99	78.564	ENSLBEG00000000178	xpot	99	78.564	Labrus_bergylta
ENSSSCG00000000466	XPOT	100	85.685	ENSLACG00000014355	XPOT	100	85.685	Latimeria_chalumnae
ENSSSCG00000000466	XPOT	99	84.647	ENSLOCG00000016512	xpot	99	84.647	Lepisosteus_oculatus
ENSSSCG00000000466	XPOT	100	98.027	ENSLAFG00000009829	XPOT	100	98.027	Loxodonta_africana
ENSSSCG00000000466	XPOT	99	75.234	ENSMFAG00000038180	-	99	75.234	Macaca_fascicularis
ENSSSCG00000000466	XPOT	100	99.064	ENSMFAG00000032644	XPOT	100	99.064	Macaca_fascicularis
ENSSSCG00000000466	XPOT	100	99.064	ENSMMUG00000007659	XPOT	100	99.064	Macaca_mulatta
ENSSSCG00000000466	XPOT	98	78.676	ENSMMUG00000021196	-	100	79.872	Macaca_mulatta
ENSSSCG00000000466	XPOT	100	98.960	ENSMNEG00000033875	XPOT	100	98.960	Macaca_nemestrina
ENSSSCG00000000466	XPOT	99	71.384	ENSMNEG00000029730	-	99	71.384	Macaca_nemestrina
ENSSSCG00000000466	XPOT	100	95.114	ENSMLEG00000043977	XPOT	100	95.114	Mandrillus_leucophaeus
ENSSSCG00000000466	XPOT	99	79.501	ENSMAMG00000020690	xpot	99	79.501	Mastacembelus_armatus
ENSSSCG00000000466	XPOT	99	79.292	ENSMZEG00005018955	xpot	99	79.292	Maylandia_zebra
ENSSSCG00000000466	XPOT	100	93.769	ENSMGAG00000010208	XPOT	100	93.769	Meleagris_gallopavo
ENSSSCG00000000466	XPOT	99	93.737	ENSMAUG00000016836	Xpot	99	93.737	Mesocricetus_auratus
ENSSSCG00000000466	XPOT	100	99.480	ENSMICG00000012001	XPOT	100	99.480	Microcebus_murinus
ENSSSCG00000000466	XPOT	100	94.912	ENSMOCG00000014097	Xpot	100	94.912	Microtus_ochrogaster
ENSSSCG00000000466	XPOT	99	79.581	ENSMMOG00000005960	xpot	97	79.581	Mola_mola
ENSSSCG00000000466	XPOT	99	79.917	ENSMALG00000007523	xpot	99	79.917	Monopterus_albus
ENSSSCG00000000466	XPOT	100	95.634	MGP_CAROLIEiJ_G0015858	Xpot	100	95.634	Mus_caroli
ENSSSCG00000000466	XPOT	100	95.426	ENSMUSG00000034667	Xpot	100	95.426	Mus_musculus
ENSSSCG00000000466	XPOT	100	95.223	MGP_PahariEiJ_G0031228	Xpot	100	95.223	Mus_pahari
ENSSSCG00000000466	XPOT	100	93.250	MGP_SPRETEiJ_G0016683	Xpot	100	93.250	Mus_spretus
ENSSSCG00000000466	XPOT	100	99.272	ENSMPUG00000017529	XPOT	100	99.272	Mustela_putorius_furo
ENSSSCG00000000466	XPOT	100	99.272	ENSMLUG00000009664	XPOT	100	99.272	Myotis_lucifugus
ENSSSCG00000000466	XPOT	100	97.193	ENSNGAG00000020615	Xpot	99	97.193	Nannospalax_galili
ENSSSCG00000000466	XPOT	99	79.605	ENSNBRG00000017136	xpot	99	79.605	Neolamprologus_brichardi
ENSSSCG00000000466	XPOT	100	99.064	ENSNLEG00000017052	XPOT	100	99.064	Nomascus_leucogenys
ENSSSCG00000000466	XPOT	71	82.214	ENSMEUG00000016032	-	76	82.214	Notamacropus_eugenii
ENSSSCG00000000466	XPOT	95	98.760	ENSOPRG00000013079	XPOT	75	100.000	Ochotona_princeps
ENSSSCG00000000466	XPOT	100	97.401	ENSODEG00000004607	XPOT	99	97.401	Octodon_degus
ENSSSCG00000000466	XPOT	99	79.709	ENSONIG00000007471	xpot	99	79.709	Oreochromis_niloticus
ENSSSCG00000000466	XPOT	100	95.114	ENSOANG00000010932	XPOT	100	95.114	Ornithorhynchus_anatinus
ENSSSCG00000000466	XPOT	100	98.960	ENSOCUG00000012126	XPOT	96	98.960	Oryctolagus_cuniculus
ENSSSCG00000000466	XPOT	99	77.906	ENSORLG00000020105	xpot	99	77.836	Oryzias_latipes
ENSSSCG00000000466	XPOT	99	77.836	ENSORLG00020003770	xpot	99	77.836	Oryzias_latipes_hni
ENSSSCG00000000466	XPOT	99	76.255	ENSORLG00015003002	xpot	99	76.255	Oryzias_latipes_hsok
ENSSSCG00000000466	XPOT	99	75.653	ENSOMEG00000021300	xpot	99	75.653	Oryzias_melastigma
ENSSSCG00000000466	XPOT	100	88.669	ENSOGAG00000004952	XPOT	100	88.669	Otolemur_garnettii
ENSSSCG00000000466	XPOT	100	99.272	ENSOARG00000003504	XPOT	100	99.272	Ovis_aries
ENSSSCG00000000466	XPOT	91	85.560	ENSPPAG00000041601	-	94	82.785	Pan_paniscus
ENSSSCG00000000466	XPOT	100	72.274	ENSPPAG00000040981	-	99	72.274	Pan_paniscus
ENSSSCG00000000466	XPOT	100	98.960	ENSPPAG00000031361	XPOT	100	98.960	Pan_paniscus
ENSSSCG00000000466	XPOT	100	99.272	ENSPPRG00000005552	XPOT	100	99.272	Panthera_pardus
ENSSSCG00000000466	XPOT	100	99.272	ENSPTIG00000022072	XPOT	96	99.272	Panthera_tigris_altaica
ENSSSCG00000000466	XPOT	100	71.028	ENSPTRG00000046749	-	99	71.028	Pan_troglodytes
ENSSSCG00000000466	XPOT	100	70.924	ENSPTRG00000049416	-	99	70.924	Pan_troglodytes
ENSSSCG00000000466	XPOT	91	87.636	ENSPTRG00000045368	-	84	85.283	Pan_troglodytes
ENSSSCG00000000466	XPOT	100	98.960	ENSPTRG00000005173	XPOT	100	98.960	Pan_troglodytes
ENSSSCG00000000466	XPOT	100	96.050	ENSPANG00000030915	-	100	96.050	Papio_anubis
ENSSSCG00000000466	XPOT	100	99.064	ENSPANG00000001024	-	100	99.064	Papio_anubis
ENSSSCG00000000466	XPOT	99	83.143	ENSPKIG00000001935	xpot	99	83.143	Paramormyrops_kingsleyae
ENSSSCG00000000466	XPOT	100	92.723	ENSPSIG00000007346	XPOT	100	92.723	Pelodiscus_sinensis
ENSSSCG00000000466	XPOT	97	75.764	ENSPMGG00000016668	xpot	96	73.693	Periophthalmus_magnuspinnatus
ENSSSCG00000000466	XPOT	100	95.010	ENSPEMG00000002538	Xpot	99	95.010	Peromyscus_maniculatus_bairdii
ENSSSCG00000000466	XPOT	79	65.835	ENSPMAG00000000201	xpot	100	65.835	Petromyzon_marinus
ENSSSCG00000000466	XPOT	100	96.154	ENSPCIG00000029686	XPOT	100	96.154	Phascolarctos_cinereus
ENSSSCG00000000466	XPOT	99	79.188	ENSPFOG00000002834	xpot	99	79.188	Poecilia_formosa
ENSSSCG00000000466	XPOT	99	79.188	ENSPLAG00000017684	xpot	99	79.188	Poecilia_latipinna
ENSSSCG00000000466	XPOT	99	79.292	ENSPMEG00000006259	xpot	99	79.292	Poecilia_mexicana
ENSSSCG00000000466	XPOT	99	77.107	ENSPREG00000018505	xpot	99	77.107	Poecilia_reticulata
ENSSSCG00000000466	XPOT	100	98.857	ENSPPYG00000004727	XPOT	100	98.857	Pongo_abelii
ENSSSCG00000000466	XPOT	88	97.546	ENSPCAG00000001574	XPOT	88	97.546	Procavia_capensis
ENSSSCG00000000466	XPOT	100	98.551	ENSPCOG00000028383	XPOT	100	98.551	Propithecus_coquereli
ENSSSCG00000000466	XPOT	100	98.545	ENSPVAG00000008199	XPOT	100	98.545	Pteropus_vampyrus
ENSSSCG00000000466	XPOT	99	79.605	ENSPNYG00000022747	xpot	99	79.605	Pundamilia_nyererei
ENSSSCG00000000466	XPOT	99	80.126	ENSPNAG00000009140	xpot	99	80.125	Pygocentrus_nattereri
ENSSSCG00000000466	XPOT	96	93.522	ENSRNOG00000007088	Xpot	92	92.708	Rattus_norvegicus
ENSSSCG00000000466	XPOT	100	99.064	ENSRBIG00000041353	XPOT	100	99.064	Rhinopithecus_bieti
ENSSSCG00000000466	XPOT	100	78.446	ENSRBIG00000032079	-	100	78.446	Rhinopithecus_bieti
ENSSSCG00000000466	XPOT	100	99.064	ENSRROG00000038276	XPOT	100	99.064	Rhinopithecus_roxellana
ENSSSCG00000000466	XPOT	100	98.753	ENSSBOG00000024782	XPOT	100	98.753	Saimiri_boliviensis_boliviensis
ENSSSCG00000000466	XPOT	100	96.466	ENSSHAG00000007043	XPOT	100	96.466	Sarcophilus_harrisii
ENSSSCG00000000466	XPOT	99	81.393	ENSSFOG00015000827	xpot	99	81.393	Scleropages_formosus
ENSSSCG00000000466	XPOT	99	77.627	ENSSMAG00000005164	xpot	99	77.627	Scophthalmus_maximus
ENSSSCG00000000466	XPOT	99	80.125	ENSSDUG00000012514	xpot	99	80.125	Seriola_dumerili
ENSSSCG00000000466	XPOT	99	80.021	ENSSLDG00000019497	xpot	99	80.021	Seriola_lalandi_dorsalis
ENSSSCG00000000466	XPOT	83	89.085	ENSSARG00000005789	XPOT	88	89.085	Sorex_araneus
ENSSSCG00000000466	XPOT	100	90.890	ENSSPUG00000009837	XPOT	100	90.890	Sphenodon_punctatus
ENSSSCG00000000466	XPOT	100	93.763	ENSTGUG00000006459	XPOT	100	93.763	Taeniopygia_guttata
ENSSSCG00000000466	XPOT	99	75.491	ENSTNIG00000002483	xpot	99	75.491	Tetraodon_nigroviridis
ENSSSCG00000000466	XPOT	90	100.000	ENSTBEG00000009738	XPOT	90	100.000	Tupaia_belangeri
ENSSSCG00000000466	XPOT	100	99.064	ENSTTRG00000016808	XPOT	100	99.064	Tursiops_truncatus
ENSSSCG00000000466	XPOT	100	99.064	ENSUAMG00000017168	XPOT	100	99.064	Ursus_americanus
ENSSSCG00000000466	XPOT	100	99.064	ENSUMAG00000020382	XPOT	100	99.064	Ursus_maritimus
ENSSSCG00000000466	XPOT	99	98.428	ENSVPAG00000004244	XPOT	100	98.428	Vicugna_pacos
ENSSSCG00000000466	XPOT	100	99.272	ENSVVUG00000015001	XPOT	100	99.272	Vulpes_vulpes
ENSSSCG00000000466	XPOT	100	84.974	ENSXETG00000021668	xpot	100	84.974	Xenopus_tropicalis
ENSSSCG00000000466	XPOT	99	76.562	ENSXCOG00000011945	xpot	99	76.562	Xiphophorus_couchianus
ENSSSCG00000000466	XPOT	99	78.980	ENSXMAG00000002827	xpot	99	78.980	Xiphophorus_maculatus