EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000000509 (Gene tree)
Gene ID: 100620115
Gene Symbol: ZFC3H1
Alias: CCDC131|CSRC2|KIAA0546|MGC23401|PSRC2
Full Name: zinc finger C3H1-type containing
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 58466 bases
Position: chr5:35612726-35671191
Accession: 100620115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000047601	zf-C3H1	PF10650.9	1.4e-07	1	1
ENSSSCP00000049087	zf-C3H1	PF10650.9	1.5e-07	1	1
ENSSSCP00000000537	zf-C3H1	PF10650.9	1.5e-07	1	1
ENSSSCP00000000538	zf-C3H1	PF10650.9	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000000548	ZFC3H1-203	6973	XM_021092001	ENSSSCP00000000538	1989 (aa)	XP_020947660	F1SH35
ENSSSCT00000046824	ZFC3H1-202	8806	-	ENSSSCP00000047601	1787 (aa)	-	A0A287AU21
ENSSSCT00000000547	ZFC3H1-204	6704	-	ENSSSCP00000000537	1915 (aa)	-	F1SH36
ENSSSCT00000039112	ZFC3H1-201	7659	-	ENSSSCP00000049087	1910 (aa)	-	A0A287AYY5

Gene Model

Click here to download ENSSSCG00000000509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000509's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000509	ZFC3H1	100	96.634	ENSG00000133858	ZFC3H1	100	95.676	Homo_sapiens
ENSSSCG00000000509	ZFC3H1	100	97.288	ENSAMEG00000000498	ZFC3H1	100	97.288	Ailuropoda_melanoleuca
ENSSSCG00000000509	ZFC3H1	93	53.465	ENSACIG00000015672	ZFC3H1	93	45.838	Amphilophus_citrinellus
ENSSSCG00000000509	ZFC3H1	94	48.588	ENSAOCG00000022567	ZFC3H1	85	57.447	Amphiprion_ocellaris
ENSSSCG00000000509	ZFC3H1	99	49.895	ENSATEG00000015391	ZFC3H1	90	48.839	Anabas_testudineus
ENSSSCG00000000509	ZFC3H1	90	73.192	ENSAPLG00000016116	ZFC3H1	100	73.304	Anas_platyrhynchos
ENSSSCG00000000509	ZFC3H1	97	70.940	ENSACAG00000007327	ZFC3H1	96	69.016	Anolis_carolinensis
ENSSSCG00000000509	ZFC3H1	100	95.842	ENSANAG00000038329	ZFC3H1	100	95.073	Aotus_nancymaae
ENSSSCG00000000509	ZFC3H1	92	49.533	ENSACLG00000021274	ZFC3H1	87	55.208	Astatotilapia_calliptera
ENSSSCG00000000509	ZFC3H1	94	45.510	ENSAMXG00000042831	-	97	45.051	Astyanax_mexicanus
ENSSSCG00000000509	ZFC3H1	100	96.883	ENSBTAG00000012267	ZFC3H1	100	96.883	Bos_taurus
ENSSSCG00000000509	ZFC3H1	100	96.436	ENSCJAG00000001384	ZFC3H1	100	95.173	Callithrix_jacchus
ENSSSCG00000000509	ZFC3H1	96	96.215	ENSCAFG00000000453	ZFC3H1	100	94.483	Canis_familiaris
ENSSSCG00000000509	ZFC3H1	96	96.215	ENSCAFG00020016502	ZFC3H1	100	94.534	Canis_lupus_dingo
ENSSSCG00000000509	ZFC3H1	100	96.883	ENSCHIG00000020097	ZFC3H1	100	96.883	Capra_hircus
ENSSSCG00000000509	ZFC3H1	100	94.327	ENSTSYG00000005471	ZFC3H1	100	94.026	Carlito_syrichta
ENSSSCG00000000509	ZFC3H1	100	95.059	ENSCPOG00000009504	ZFC3H1	100	90.905	Cavia_porcellus
ENSSSCG00000000509	ZFC3H1	100	96.238	ENSCCAG00000035967	ZFC3H1	100	95.173	Cebus_capucinus
ENSSSCG00000000509	ZFC3H1	100	96.436	ENSCATG00000016321	ZFC3H1	100	95.425	Cercocebus_atys
ENSSSCG00000000509	ZFC3H1	100	94.827	ENSCLAG00000007646	ZFC3H1	100	94.425	Chinchilla_lanigera
ENSSSCG00000000509	ZFC3H1	100	96.436	ENSCSAG00000004100	ZFC3H1	100	95.425	Chlorocebus_sabaeus
ENSSSCG00000000509	ZFC3H1	97	78.416	ENSCPBG00000013449	ZFC3H1	94	75.843	Chrysemys_picta_bellii
ENSSSCG00000000509	ZFC3H1	100	96.436	ENSCANG00000030229	ZFC3H1	100	95.475	Colobus_angolensis_palliatus
ENSSSCG00000000509	ZFC3H1	100	91.519	ENSCGRG00001011660	Zfc3h1	100	88.421	Cricetulus_griseus_chok1gshd
ENSSSCG00000000509	ZFC3H1	90	94.098	ENSCGRG00000006894	Zfc3h1	100	92.566	Cricetulus_griseus_crigri
ENSSSCG00000000509	ZFC3H1	99	40.604	ENSCSEG00000021462	ZFC3H1	99	40.834	Cynoglossus_semilaevis
ENSSSCG00000000509	ZFC3H1	94	48.036	ENSCVAG00000019629	-	93	49.138	Cyprinodon_variegatus
ENSSSCG00000000509	ZFC3H1	100	95.425	ENSDNOG00000010314	ZFC3H1	100	95.324	Dasypus_novemcinctus
ENSSSCG00000000509	ZFC3H1	86	40.728	ENSEBUG00000003491	-	78	40.541	Eptatretus_burgeri
ENSSSCG00000000509	ZFC3H1	99	94.590	ENSEASG00005008229	ZFC3H1	100	95.173	Equus_asinus_asinus
ENSSSCG00000000509	ZFC3H1	99	96.252	ENSECAG00000026833	ZFC3H1	100	95.324	Equus_caballus
ENSSSCG00000000509	ZFC3H1	98	51.648	ENSELUG00000013421	-	89	51.609	Esox_lucius
ENSSSCG00000000509	ZFC3H1	100	97.134	ENSFCAG00000024198	ZFC3H1	100	97.134	Felis_catus
ENSSSCG00000000509	ZFC3H1	99	71.850	ENSFALG00000010320	ZFC3H1	99	72.024	Ficedula_albicollis
ENSSSCG00000000509	ZFC3H1	100	94.862	ENSFDAG00000017503	ZFC3H1	100	93.970	Fukomys_damarensis
ENSSSCG00000000509	ZFC3H1	93	49.680	ENSGMOG00000004527	-	90	49.680	Gadus_morhua
ENSSSCG00000000509	ZFC3H1	99	71.996	ENSGALG00000010177	ZFC3H1	99	72.383	Gallus_gallus
ENSSSCG00000000509	ZFC3H1	70	48.286	ENSGAFG00000013283	-	99	48.450	Gambusia_affinis
ENSSSCG00000000509	ZFC3H1	97	49.964	ENSGACG00000007651	ZFC3H1	94	47.534	Gasterosteus_aculeatus
ENSSSCG00000000509	ZFC3H1	97	77.907	ENSGAGG00000013798	ZFC3H1	100	75.498	Gopherus_agassizii
ENSSSCG00000000509	ZFC3H1	100	96.238	ENSGGOG00000025994	ZFC3H1	100	95.525	Gorilla_gorilla
ENSSSCG00000000509	ZFC3H1	100	94.324	ENSHGLG00000014297	ZFC3H1	100	94.224	Heterocephalus_glaber_female
ENSSSCG00000000509	ZFC3H1	100	94.205	ENSHGLG00100006263	ZFC3H1	100	94.073	Heterocephalus_glaber_male
ENSSSCG00000000509	ZFC3H1	69	42.500	ENSHCOG00000009144	-	70	49.751	Hippocampus_comes
ENSSSCG00000000509	ZFC3H1	100	96.832	ENSSTOG00000002650	ZFC3H1	100	96.078	Ictidomys_tridecemlineatus
ENSSSCG00000000509	ZFC3H1	83	48.879	ENSKMAG00000021476	-	85	50.495	Kryptolebias_marmoratus
ENSSSCG00000000509	ZFC3H1	84	48.710	ENSLBEG00000012352	-	86	46.404	Labrus_bergylta
ENSSSCG00000000509	ZFC3H1	95	62.677	ENSLACG00000002585	ZFC3H1	94	67.053	Latimeria_chalumnae
ENSSSCG00000000509	ZFC3H1	97	60.986	ENSLOCG00000016238	ZFC3H1	71	60.942	Lepisosteus_oculatus
ENSSSCG00000000509	ZFC3H1	99	96.429	ENSLAFG00000005820	ZFC3H1	100	95.320	Loxodonta_africana
ENSSSCG00000000509	ZFC3H1	100	96.238	ENSMFAG00000039403	ZFC3H1	100	95.425	Macaca_fascicularis
ENSSSCG00000000509	ZFC3H1	100	96.238	ENSMMUG00000020943	ZFC3H1	100	95.425	Macaca_mulatta
ENSSSCG00000000509	ZFC3H1	100	96.238	ENSMNEG00000008807	ZFC3H1	100	95.375	Macaca_nemestrina
ENSSSCG00000000509	ZFC3H1	100	96.436	ENSMLEG00000029967	ZFC3H1	100	95.425	Mandrillus_leucophaeus
ENSSSCG00000000509	ZFC3H1	93	51.140	ENSMAMG00000021320	ZFC3H1	87	50.978	Mastacembelus_armatus
ENSSSCG00000000509	ZFC3H1	90	74.319	ENSMGAG00000010716	ZFC3H1	99	74.541	Meleagris_gallopavo
ENSSSCG00000000509	ZFC3H1	100	96.436	ENSMICG00000009137	ZFC3H1	100	95.626	Microcebus_murinus
ENSSSCG00000000509	ZFC3H1	99	82.285	ENSMODG00000020408	ZFC3H1	100	81.935	Monodelphis_domestica
ENSSSCG00000000509	ZFC3H1	99	92.003	MGP_CAROLIEiJ_G0015814	Zfc3h1	99	89.950	Mus_caroli
ENSSSCG00000000509	ZFC3H1	99	92.074	ENSMUSG00000034163	Zfc3h1	99	90.457	Mus_musculus
ENSSSCG00000000509	ZFC3H1	99	89.943	MGP_PahariEiJ_G0031273	Zfc3h1	99	88.972	Mus_pahari
ENSSSCG00000000509	ZFC3H1	99	92.144	MGP_SPRETEiJ_G0016636	Zfc3h1	99	90.617	Mus_spretus
ENSSSCG00000000509	ZFC3H1	100	97.235	ENSMPUG00000017488	ZFC3H1	100	97.235	Mustela_putorius_furo
ENSSSCG00000000509	ZFC3H1	99	93.688	ENSMLUG00000011723	ZFC3H1	99	91.968	Myotis_lucifugus
ENSSSCG00000000509	ZFC3H1	100	92.786	ENSNGAG00000017623	Zfc3h1	100	92.010	Nannospalax_galili
ENSSSCG00000000509	ZFC3H1	100	96.634	ENSNLEG00000004372	ZFC3H1	100	94.822	Nomascus_leucogenys
ENSSSCG00000000509	ZFC3H1	78	96.429	ENSOPRG00000008075	ZFC3H1	79	94.286	Ochotona_princeps
ENSSSCG00000000509	ZFC3H1	55	48.024	ENSONIG00000018271	ZFC3H1	99	47.632	Oreochromis_niloticus
ENSSSCG00000000509	ZFC3H1	100	94.268	ENSOCUG00000004591	ZFC3H1	100	94.470	Oryctolagus_cuniculus
ENSSSCG00000000509	ZFC3H1	95	46.278	ENSORLG00000000155	-	92	47.440	Oryzias_latipes
ENSSSCG00000000509	ZFC3H1	95	46.278	ENSORLG00015020699	-	92	47.440	Oryzias_latipes_hsok
ENSSSCG00000000509	ZFC3H1	92	50.980	ENSOMEG00000015403	-	86	50.000	Oryzias_melastigma
ENSSSCG00000000509	ZFC3H1	100	94.676	ENSOGAG00000033606	ZFC3H1	100	94.676	Otolemur_garnettii
ENSSSCG00000000509	ZFC3H1	100	96.833	ENSOARG00000014589	ZFC3H1	100	96.833	Ovis_aries
ENSSSCG00000000509	ZFC3H1	100	96.634	ENSPPAG00000029409	ZFC3H1	100	95.726	Pan_paniscus
ENSSSCG00000000509	ZFC3H1	100	97.084	ENSPPRG00000010196	ZFC3H1	100	97.084	Panthera_pardus
ENSSSCG00000000509	ZFC3H1	100	97.084	ENSPTIG00000006898	ZFC3H1	100	97.084	Panthera_tigris_altaica
ENSSSCG00000000509	ZFC3H1	100	96.634	ENSPTRG00000005224	ZFC3H1	100	95.726	Pan_troglodytes
ENSSSCG00000000509	ZFC3H1	100	96.436	ENSPANG00000009558	ZFC3H1	100	92.911	Papio_anubis
ENSSSCG00000000509	ZFC3H1	98	54.253	ENSPKIG00000023219	ZFC3H1	99	50.296	Paramormyrops_kingsleyae
ENSSSCG00000000509	ZFC3H1	99	77.801	ENSPSIG00000012997	ZFC3H1	96	91.852	Pelodiscus_sinensis
ENSSSCG00000000509	ZFC3H1	94	45.732	ENSPMGG00000007504	ZFC3H1	98	44.982	Periophthalmus_magnuspinnatus
ENSSSCG00000000509	ZFC3H1	99	81.900	ENSPCIG00000025066	ZFC3H1	100	82.090	Phascolarctos_cinereus
ENSSSCG00000000509	ZFC3H1	99	46.875	ENSPFOG00000001903	-	94	44.981	Poecilia_formosa
ENSSSCG00000000509	ZFC3H1	87	48.571	ENSPLAG00000015995	-	93	47.490	Poecilia_latipinna
ENSSSCG00000000509	ZFC3H1	95	47.126	ENSPMEG00000007517	-	93	44.285	Poecilia_mexicana
ENSSSCG00000000509	ZFC3H1	89	48.034	ENSPREG00000016974	ZFC3H1	83	49.066	Poecilia_reticulata
ENSSSCG00000000509	ZFC3H1	100	96.436	ENSPPYG00000004773	ZFC3H1	100	95.425	Pongo_abelii
ENSSSCG00000000509	ZFC3H1	89	94.264	ENSPCAG00000003723	ZFC3H1	86	94.264	Procavia_capensis
ENSSSCG00000000509	ZFC3H1	100	96.436	ENSPCOG00000019879	ZFC3H1	100	95.676	Propithecus_coquereli
ENSSSCG00000000509	ZFC3H1	96	96.832	ENSPVAG00000012354	ZFC3H1	93	96.832	Pteropus_vampyrus
ENSSSCG00000000509	ZFC3H1	95	48.636	ENSPNYG00000005977	ZFC3H1	87	55.208	Pundamilia_nyererei
ENSSSCG00000000509	ZFC3H1	92	48.078	ENSPNAG00000017704	-	96	46.656	Pygocentrus_nattereri
ENSSSCG00000000509	ZFC3H1	100	83.677	ENSRNOG00000053060	Zfc3h1	96	88.845	Rattus_norvegicus
ENSSSCG00000000509	ZFC3H1	100	93.663	ENSRBIG00000028462	ZFC3H1	100	92.459	Rhinopithecus_bieti
ENSSSCG00000000509	ZFC3H1	100	96.238	ENSRROG00000040039	ZFC3H1	100	95.475	Rhinopithecus_roxellana
ENSSSCG00000000509	ZFC3H1	100	96.634	ENSSBOG00000032676	ZFC3H1	100	93.967	Saimiri_boliviensis_boliviensis
ENSSSCG00000000509	ZFC3H1	100	80.261	ENSSHAG00000002431	ZFC3H1	99	79.860	Sarcophilus_harrisii
ENSSSCG00000000509	ZFC3H1	88	54.899	ENSSFOG00015018112	ZFC3H1	95	52.657	Scleropages_formosus
ENSSSCG00000000509	ZFC3H1	76	54.455	ENSSMAG00000019783	ZFC3H1	94	48.373	Scophthalmus_maximus
ENSSSCG00000000509	ZFC3H1	99	49.930	ENSSDUG00000000244	ZFC3H1	90	50.153	Seriola_dumerili
ENSSSCG00000000509	ZFC3H1	92	50.308	ENSSLDG00000018408	ZFC3H1	89	50.448	Seriola_lalandi_dorsalis
ENSSSCG00000000509	ZFC3H1	83	95.416	ENSSARG00000008639	ZFC3H1	87	93.088	Sorex_araneus
ENSSSCG00000000509	ZFC3H1	86	48.542	ENSSPAG00000001916	-	87	49.116	Stegastes_partitus
ENSSSCG00000000509	ZFC3H1	97	74.255	ENSTGUG00000007206	ZFC3H1	99	71.822	Taeniopygia_guttata
ENSSSCG00000000509	ZFC3H1	67	48.154	ENSTRUG00000004528	-	90	49.658	Takifugu_rubripes
ENSSSCG00000000509	ZFC3H1	88	95.137	ENSTBEG00000016441	ZFC3H1	84	97.059	Tupaia_belangeri
ENSSSCG00000000509	ZFC3H1	100	97.426	ENSTTRG00000007328	ZFC3H1	100	95.173	Tursiops_truncatus
ENSSSCG00000000509	ZFC3H1	100	97.436	ENSUAMG00000001880	ZFC3H1	100	97.436	Ursus_americanus
ENSSSCG00000000509	ZFC3H1	100	96.631	ENSUMAG00000021131	ZFC3H1	99	96.631	Ursus_maritimus
ENSSSCG00000000509	ZFC3H1	90	96.929	ENSVVUG00000008655	ZFC3H1	99	96.929	Vulpes_vulpes
ENSSSCG00000000509	ZFC3H1	92	61.880	ENSXETG00000033302	ZFC3H1	99	58.359	Xenopus_tropicalis
ENSSSCG00000000509	ZFC3H1	99	48.216	ENSXMAG00000006933	-	92	47.471	Xiphophorus_maculatus