EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000000667 (Gene tree)
Gene ID: 100526050
Gene Symbol: AICDA
Alias: AID|ARP2|CDA2|HIGM2
Full Name: activation induced cytidine deaminase
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 10254 bases
Position: chr5:62777230-62787483
Accession: 100526050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000000708	APOBEC_N	PF08210.11	1.6e-61	1	1
ENSSSCP00000050930	APOBEC_N	PF08210.11	7.9e-44	1	1
ENSSSCP00000000708	APOBEC_C	PF05240.14	3.4e-28	1	1
ENSSSCP00000050930	APOBEC_C	PF05240.14	5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000000723	AICDA-202	2364	XM_003126511	ENSSSCP00000000708	198 (aa)	XP_003126559	F1SLW5
ENSSSCT00000063046	AICDA-201	3298	-	ENSSSCP00000050930	185 (aa)	-	A0A287B3T7

Gene Model

Click here to download ENSSSCG00000000667's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc04672	Intestinal immune network for IgA production	KEGG
ssc05340	Primary immunodeficiency	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000667's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000000667	AICDA	86	33.523	ENSSSCG00000036018	APOBEC2	81	35.593
ENSSSCG00000000667	AICDA	98	42.045	ENSSSCG00000000091	APOBEC3B	87	42.045
ENSSSCG00000000667	AICDA	60	34.921	ENSSSCG00000000668	APOBEC1	53	34.921

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000667	AICDA	100	93.434	ENSG00000111732	AICDA	100	93.434	Homo_sapiens
ENSSSCG00000000667	AICDA	99	56.250	ENSAPOG00000023552	aicda	98	58.947	Acanthochromis_polyacanthus
ENSSSCG00000000667	AICDA	99	94.388	ENSAMEG00000007082	AICDA	99	94.388	Ailuropoda_melanoleuca
ENSSSCG00000000667	AICDA	98	59.898	ENSACIG00000012301	aicda	100	59.898	Amphilophus_citrinellus
ENSSSCG00000000667	AICDA	100	57.789	ENSAOCG00000000482	aicda	100	57.789	Amphiprion_ocellaris
ENSSSCG00000000667	AICDA	100	57.789	ENSAPEG00000009755	aicda	100	57.789	Amphiprion_percula
ENSSSCG00000000667	AICDA	99	61.111	ENSATEG00000022035	aicda	97	61.111	Anabas_testudineus
ENSSSCG00000000667	AICDA	99	86.735	ENSAPLG00000013954	AICDA	98	86.735	Anas_platyrhynchos
ENSSSCG00000000667	AICDA	100	85.354	ENSACAG00000017441	AICDA	99	85.354	Anolis_carolinensis
ENSSSCG00000000667	AICDA	100	93.939	ENSANAG00000022438	AICDA	100	93.939	Aotus_nancymaae
ENSSSCG00000000667	AICDA	98	59.898	ENSACLG00000022679	aicda	100	59.898	Astatotilapia_calliptera
ENSSSCG00000000667	AICDA	77	58.824	ENSAMXG00000037242	aicda	63	58.940	Astyanax_mexicanus
ENSSSCG00000000667	AICDA	100	94.975	ENSBTAG00000018849	AICDA	100	94.975	Bos_taurus
ENSSSCG00000000667	AICDA	100	93.939	ENSCJAG00000018856	AICDA	100	93.939	Callithrix_jacchus
ENSSSCG00000000667	AICDA	100	94.444	ENSCAFG00000013897	AICDA	85	94.444	Canis_familiaris
ENSSSCG00000000667	AICDA	100	93.434	ENSCAFG00020003515	AICDA	97	93.434	Canis_lupus_dingo
ENSSSCG00000000667	AICDA	100	93.467	ENSCHIG00000012409	AICDA	100	93.467	Capra_hircus
ENSSSCG00000000667	AICDA	100	90.909	ENSTSYG00000011304	AICDA	100	90.909	Carlito_syrichta
ENSSSCG00000000667	AICDA	91	92.818	ENSCPOG00000037838	-	100	92.818	Cavia_porcellus
ENSSSCG00000000667	AICDA	97	92.228	ENSCPOG00000030440	-	100	92.228	Cavia_porcellus
ENSSSCG00000000667	AICDA	97	91.710	ENSCPOG00000039255	-	100	91.710	Cavia_porcellus
ENSSSCG00000000667	AICDA	97	78.771	ENSCCAG00000030398	AICDA	100	86.164	Cebus_capucinus
ENSSSCG00000000667	AICDA	100	94.949	ENSCATG00000039986	AICDA	100	94.949	Cercocebus_atys
ENSSSCG00000000667	AICDA	99	94.898	ENSCSAG00000009663	AICDA	100	94.898	Chlorocebus_sabaeus
ENSSSCG00000000667	AICDA	100	73.367	ENSCHOG00000010248	AICDA	100	73.367	Choloepus_hoffmanni
ENSSSCG00000000667	AICDA	99	87.755	ENSCPBG00000014337	AICDA	98	87.755	Chrysemys_picta_bellii
ENSSSCG00000000667	AICDA	100	94.949	ENSCANG00000035131	AICDA	100	94.949	Colobus_angolensis_palliatus
ENSSSCG00000000667	AICDA	100	93.939	ENSCGRG00001009654	Aicda	100	93.939	Cricetulus_griseus_chok1gshd
ENSSSCG00000000667	AICDA	100	93.939	ENSCGRG00000013829	Aicda	100	93.939	Cricetulus_griseus_crigri
ENSSSCG00000000667	AICDA	100	56.667	ENSCSEG00000018589	aicda	98	56.667	Cynoglossus_semilaevis
ENSSSCG00000000667	AICDA	99	59.500	ENSCVAG00000001218	aicda	99	59.500	Cyprinodon_variegatus
ENSSSCG00000000667	AICDA	100	63.285	ENSDARG00000015734	aicda	98	63.285	Danio_rerio
ENSSSCG00000000667	AICDA	90	89.944	ENSETEG00000014702	AICDA	99	89.944	Echinops_telfairi
ENSSSCG00000000667	AICDA	100	93.434	ENSEASG00005015947	AICDA	100	93.434	Equus_asinus_asinus
ENSSSCG00000000667	AICDA	100	94.949	ENSECAG00000018578	AICDA	100	94.949	Equus_caballus
ENSSSCG00000000667	AICDA	90	92.737	ENSEEUG00000013899	AICDA	99	92.737	Erinaceus_europaeus
ENSSSCG00000000667	AICDA	99	59.330	ENSELUG00000016293	aicda	98	59.330	Esox_lucius
ENSSSCG00000000667	AICDA	100	94.444	ENSFCAG00000006052	AICDA	85	94.444	Felis_catus
ENSSSCG00000000667	AICDA	99	81.122	ENSFALG00000007261	AICDA	100	81.122	Ficedula_albicollis
ENSSSCG00000000667	AICDA	91	84.530	ENSFDAG00000011141	AICDA	100	84.530	Fukomys_damarensis
ENSSSCG00000000667	AICDA	98	56.311	ENSFHEG00000015733	aicda	99	56.311	Fundulus_heteroclitus
ENSSSCG00000000667	AICDA	100	58.294	ENSGMOG00000004114	aicda	98	58.294	Gadus_morhua
ENSSSCG00000000667	AICDA	100	86.364	ENSGALG00000014280	AICDA	100	86.364	Gallus_gallus
ENSSSCG00000000667	AICDA	98	55.072	ENSGAFG00000013758	aicda	95	55.072	Gambusia_affinis
ENSSSCG00000000667	AICDA	100	55.238	ENSGACG00000010521	aicda	98	55.238	Gasterosteus_aculeatus
ENSSSCG00000000667	AICDA	99	86.735	ENSGAGG00000011838	-	98	86.735	Gopherus_agassizii
ENSSSCG00000000667	AICDA	100	86.869	ENSGAGG00000011839	-	100	86.869	Gopherus_agassizii
ENSSSCG00000000667	AICDA	99	93.367	ENSGGOG00000003338	AICDA	98	93.367	Gorilla_gorilla
ENSSSCG00000000667	AICDA	98	59.898	ENSHBUG00000014333	aicda	100	59.898	Haplochromis_burtoni
ENSSSCG00000000667	AICDA	99	94.898	ENSHGLG00000001443	AICDA	98	94.898	Heterocephalus_glaber_female
ENSSSCG00000000667	AICDA	100	94.444	ENSHGLG00100001381	AICDA	100	94.444	Heterocephalus_glaber_male
ENSSSCG00000000667	AICDA	95	59.375	ENSHCOG00000018886	aicda	97	59.375	Hippocampus_comes
ENSSSCG00000000667	AICDA	100	57.416	ENSIPUG00000007380	aicda	99	57.416	Ictalurus_punctatus
ENSSSCG00000000667	AICDA	100	93.939	ENSSTOG00000010972	AICDA	100	93.939	Ictidomys_tridecemlineatus
ENSSSCG00000000667	AICDA	91	94.475	ENSJJAG00000000908	Aicda	100	94.475	Jaculus_jaculus
ENSSSCG00000000667	AICDA	100	59.296	ENSKMAG00000006359	aicda	100	59.296	Kryptolebias_marmoratus
ENSSSCG00000000667	AICDA	100	55.769	ENSLBEG00000015351	aicda	100	56.667	Labrus_bergylta
ENSSSCG00000000667	AICDA	76	69.286	ENSLACG00000009320	aicda	94	69.286	Latimeria_chalumnae
ENSSSCG00000000667	AICDA	64	64.286	ENSLOCG00000008158	aicda	98	64.286	Lepisosteus_oculatus
ENSSSCG00000000667	AICDA	98	93.846	ENSLAFG00000000721	AICDA	100	93.846	Loxodonta_africana
ENSSSCG00000000667	AICDA	100	94.949	ENSMFAG00000037834	AICDA	100	94.949	Macaca_fascicularis
ENSSSCG00000000667	AICDA	100	94.949	ENSMMUG00000019134	AICDA	100	94.949	Macaca_mulatta
ENSSSCG00000000667	AICDA	100	94.949	ENSMNEG00000043421	AICDA	100	94.949	Macaca_nemestrina
ENSSSCG00000000667	AICDA	74	95.238	ENSMLEG00000039759	-	99	86.391	Mandrillus_leucophaeus
ENSSSCG00000000667	AICDA	100	94.949	ENSMLEG00000040938	AICDA	100	94.949	Mandrillus_leucophaeus
ENSSSCG00000000667	AICDA	100	57.619	ENSMAMG00000020032	aicda	98	57.619	Mastacembelus_armatus
ENSSSCG00000000667	AICDA	98	59.898	ENSMZEG00005016678	aicda	100	59.898	Maylandia_zebra
ENSSSCG00000000667	AICDA	99	86.224	ENSMGAG00000013942	AICDA	100	86.224	Meleagris_gallopavo
ENSSSCG00000000667	AICDA	100	93.939	ENSMAUG00000012229	Aicda	100	93.939	Mesocricetus_auratus
ENSSSCG00000000667	AICDA	100	93.970	ENSMICG00000011695	AICDA	100	93.970	Microcebus_murinus
ENSSSCG00000000667	AICDA	100	93.434	ENSMOCG00000022460	Aicda	100	93.434	Microtus_ochrogaster
ENSSSCG00000000667	AICDA	100	56.190	ENSMMOG00000016707	aicda	98	56.190	Mola_mola
ENSSSCG00000000667	AICDA	97	91.192	ENSMODG00000018002	AICDA	100	91.192	Monodelphis_domestica
ENSSSCG00000000667	AICDA	100	56.190	ENSMALG00000010442	aicda	99	55.714	Monopterus_albus
ENSSSCG00000000667	AICDA	77	92.958	MGP_CAROLIEiJ_G0028824	-	100	92.958	Mus_caroli
ENSSSCG00000000667	AICDA	100	93.434	ENSMUSG00000040627	Aicda	100	95.000	Mus_musculus
ENSSSCG00000000667	AICDA	100	93.434	MGP_PahariEiJ_G0022579	Aicda	100	95.000	Mus_pahari
ENSSSCG00000000667	AICDA	100	93.434	MGP_SPRETEiJ_G0029856	Aicda	100	95.000	Mus_spretus
ENSSSCG00000000667	AICDA	100	94.949	ENSMPUG00000017533	AICDA	94	94.949	Mustela_putorius_furo
ENSSSCG00000000667	AICDA	99	94.898	ENSMLUG00000007881	AICDA	99	94.898	Myotis_lucifugus
ENSSSCG00000000667	AICDA	100	92.929	ENSNGAG00000023430	Aicda	100	92.929	Nannospalax_galili
ENSSSCG00000000667	AICDA	100	56.667	ENSNBRG00000000070	aicda	96	61.053	Neolamprologus_brichardi
ENSSSCG00000000667	AICDA	100	92.929	ENSNLEG00000001917	AICDA	100	92.929	Nomascus_leucogenys
ENSSSCG00000000667	AICDA	99	89.796	ENSMEUG00000006570	AICDA	98	89.796	Notamacropus_eugenii
ENSSSCG00000000667	AICDA	98	88.205	ENSOPRG00000013486	AICDA	100	88.205	Ochotona_princeps
ENSSSCG00000000667	AICDA	98	92.308	ENSODEG00000001235	AICDA	100	91.713	Octodon_degus
ENSSSCG00000000667	AICDA	100	55.714	ENSONIG00000012823	aicda	98	55.714	Oreochromis_niloticus
ENSSSCG00000000667	AICDA	99	93.367	ENSOANG00000007150	AICDA	99	93.367	Ornithorhynchus_anatinus
ENSSSCG00000000667	AICDA	97	91.710	ENSOCUG00000023739	AICDA	100	91.710	Oryctolagus_cuniculus
ENSSSCG00000000667	AICDA	100	58.000	ENSORLG00000011705	aicda	100	58.000	Oryzias_latipes
ENSSSCG00000000667	AICDA	100	58.000	ENSORLG00020006547	aicda	100	58.000	Oryzias_latipes_hni
ENSSSCG00000000667	AICDA	98	58.376	ENSORLG00015012504	aicda	98	58.376	Oryzias_latipes_hsok
ENSSSCG00000000667	AICDA	100	58.000	ENSOMEG00000011880	aicda	98	58.000	Oryzias_melastigma
ENSSSCG00000000667	AICDA	99	93.878	ENSOGAG00000026770	AICDA	99	93.878	Otolemur_garnettii
ENSSSCG00000000667	AICDA	100	92.537	ENSOARG00000001982	AICDA	100	92.537	Ovis_aries
ENSSSCG00000000667	AICDA	100	93.434	ENSPPAG00000038169	AICDA	100	93.434	Pan_paniscus
ENSSSCG00000000667	AICDA	100	94.444	ENSPPRG00000012985	AICDA	100	94.444	Panthera_pardus
ENSSSCG00000000667	AICDA	100	94.444	ENSPTIG00000020074	AICDA	100	94.444	Panthera_tigris_altaica
ENSSSCG00000000667	AICDA	100	92.929	ENSPTRG00000004640	AICDA	100	92.929	Pan_troglodytes
ENSSSCG00000000667	AICDA	100	94.949	ENSPANG00000017883	AICDA	100	94.949	Papio_anubis
ENSSSCG00000000667	AICDA	91	63.684	ENSPKIG00000001499	aicda	100	63.684	Paramormyrops_kingsleyae
ENSSSCG00000000667	AICDA	99	88.265	ENSPSIG00000013283	AICDA	100	88.265	Pelodiscus_sinensis
ENSSSCG00000000667	AICDA	95	60.101	ENSPMGG00000014598	aicda	93	59.799	Periophthalmus_magnuspinnatus
ENSSSCG00000000667	AICDA	100	92.929	ENSPEMG00000008352	Aicda	100	92.929	Peromyscus_maniculatus_bairdii
ENSSSCG00000000667	AICDA	100	90.404	ENSPCIG00000023974	AICDA	100	90.404	Phascolarctos_cinereus
ENSSSCG00000000667	AICDA	95	52.459	ENSPFOG00000011197	aicda	97	52.459	Poecilia_formosa
ENSSSCG00000000667	AICDA	100	54.762	ENSPLAG00000014098	aicda	100	54.762	Poecilia_latipinna
ENSSSCG00000000667	AICDA	100	54.762	ENSPMEG00000024203	aicda	98	54.762	Poecilia_mexicana
ENSSSCG00000000667	AICDA	100	54.762	ENSPREG00000009041	aicda	98	54.762	Poecilia_reticulata
ENSSSCG00000000667	AICDA	99	93.878	ENSPPYG00000004242	AICDA	100	93.878	Pongo_abelii
ENSSSCG00000000667	AICDA	54	90.909	ENSPCAG00000009544	-	54	90.909	Procavia_capensis
ENSSSCG00000000667	AICDA	67	92.537	ENSPCOG00000003380	-	80	92.537	Propithecus_coquereli
ENSSSCG00000000667	AICDA	100	94.444	ENSPVAG00000012185	AICDA	100	94.444	Pteropus_vampyrus
ENSSSCG00000000667	AICDA	98	59.898	ENSPNYG00000000988	aicda	100	59.898	Pundamilia_nyererei
ENSSSCG00000000667	AICDA	100	62.201	ENSPNAG00000019237	aicda	99	62.621	Pygocentrus_nattereri
ENSSSCG00000000667	AICDA	100	93.939	ENSRNOG00000015478	Aicda	100	93.939	Rattus_norvegicus
ENSSSCG00000000667	AICDA	100	94.949	ENSRBIG00000026659	AICDA	100	94.949	Rhinopithecus_bieti
ENSSSCG00000000667	AICDA	100	94.949	ENSRROG00000032866	AICDA	100	94.949	Rhinopithecus_roxellana
ENSSSCG00000000667	AICDA	100	74.747	ENSSBOG00000035758	AICDA	100	84.906	Saimiri_boliviensis_boliviensis
ENSSSCG00000000667	AICDA	100	90.404	ENSSHAG00000008694	AICDA	100	90.404	Sarcophilus_harrisii
ENSSSCG00000000667	AICDA	100	61.353	ENSSFOG00015001695	aicda	98	61.353	Scleropages_formosus
ENSSSCG00000000667	AICDA	99	57.212	ENSSMAG00000012339	aicda	89	57.212	Scophthalmus_maximus
ENSSSCG00000000667	AICDA	99	58.883	ENSSDUG00000009894	aicda	97	58.883	Seriola_dumerili
ENSSSCG00000000667	AICDA	98	59.184	ENSSLDG00000023022	aicda	98	56.190	Seriola_lalandi_dorsalis
ENSSSCG00000000667	AICDA	97	82.902	ENSSPUG00000009022	AICDA	98	82.902	Sphenodon_punctatus
ENSSSCG00000000667	AICDA	100	54.762	ENSSPAG00000021499	aicda	66	54.762	Stegastes_partitus
ENSSSCG00000000667	AICDA	99	79.592	ENSTGUG00000013115	AICDA	100	79.592	Taeniopygia_guttata
ENSSSCG00000000667	AICDA	99	55.981	ENSTRUG00000007079	aicda	98	55.981	Takifugu_rubripes
ENSSSCG00000000667	AICDA	99	56.190	ENSTNIG00000008118	aicda	98	56.190	Tetraodon_nigroviridis
ENSSSCG00000000667	AICDA	99	63.776	ENSTBEG00000002559	AICDA	100	63.776	Tupaia_belangeri
ENSSSCG00000000667	AICDA	91	93.407	ENSTTRG00000000703	AICDA	100	93.407	Tursiops_truncatus
ENSSSCG00000000667	AICDA	96	94.241	ENSUAMG00000011642	AICDA	97	94.241	Ursus_americanus
ENSSSCG00000000667	AICDA	96	94.241	ENSUMAG00000016540	AICDA	97	94.241	Ursus_maritimus
ENSSSCG00000000667	AICDA	74	93.197	ENSVPAG00000003950	AICDA	100	93.197	Vicugna_pacos
ENSSSCG00000000667	AICDA	99	68.528	ENSXETG00000023905	aicda	98	68.528	Xenopus_tropicalis
ENSSSCG00000000667	AICDA	98	56.122	ENSXCOG00000019386	aicda	90	56.122	Xiphophorus_couchianus
ENSSSCG00000000667	AICDA	98	57.653	ENSXMAG00000011889	aicda	91	57.653	Xiphophorus_maculatus