EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000000697 (Gene tree)
Gene ID
100515610
Gene Symbol
-
Alias
-
Full Name
chromodomain helicase DNA binding protein 4
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
39280 bases
Position
chr5:64065992-64105271
Accession
100515610
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000045477ResIIIPF04851.156.4e-1011
ENSSSCP00000040831ResIIIPF04851.156.6e-1011
ENSSSCP00000000743ResIIIPF04851.156.9e-1011
ENSSSCP00000045148ResIIIPF04851.156.9e-1011
ENSSSCP00000038037ResIIIPF04851.156.9e-1011
ENSSSCP00000041445ResIIIPF04851.156.9e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000057668-6742-ENSSSCP000000451481912 (aa)-F1SLR5
ENSSSCT00000046955-6911XM_021092427ENSSSCP000000380371905 (aa)XP_020948086A0A287A2Q8
ENSSSCT00000057514-6155-ENSSSCP000000454771859 (aa)-A0A287AN98
ENSSSCT00000064375-6571XM_021092428ENSSSCP000000414451905 (aa)XP_020948087A0A287A2Q8
ENSSSCT00000000759-6500XM_021092425ENSSSCP000000007431912 (aa)XP_020948084F1SLR5
ENSSSCT00000058324-7115-ENSSSCP000000408311863 (aa)-A0A287AAA4
Gene Model
Click here to download ENSSSCG00000000697's gene model file
Pathways
Pathway IDPathway NameSource
ssc05165Human papillomavirus infectionKEGG
ssc05203Viral carcinogenesisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000697's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000000697-9570.107ENSSSCG00000021363CHD39970.612
ENSSSCG00000000697-9671.444ENSSSCG00000003366CHD57875.711
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000000697-10099.003ENSG00000111642CHD410099.200Homo_sapiens
ENSSSCG00000000697-9280.056ENSAPOG00000008935chd4a9978.663Acanthochromis_polyacanthus
ENSSSCG00000000697-9270.605ENSAPOG00000020502-9370.399Acanthochromis_polyacanthus
ENSSSCG00000000697-10098.954ENSAMEG00000014179-9998.954Ailuropoda_melanoleuca
ENSSSCG00000000697-9577.742ENSACIG00000019310chd4a9092.825Amphilophus_citrinellus
ENSSSCG00000000697-9376.263ENSACIG00000012387-9576.137Amphilophus_citrinellus
ENSSSCG00000000697-9675.107ENSAOCG00000000507-9677.671Amphiprion_ocellaris
ENSSSCG00000000697-9381.188ENSAOCG00000016412-9880.960Amphiprion_ocellaris
ENSSSCG00000000697-9574.853ENSAPEG00000005957-9875.175Amphiprion_percula
ENSSSCG00000000697-9285.833ENSAPEG00000001757chd4a9976.776Amphiprion_percula
ENSSSCG00000000697-9271.099ENSAPEG00000020306-8883.019Amphiprion_percula
ENSSSCG00000000697-8775.244ENSATEG00000021141-9675.710Anabas_testudineus
ENSSSCG00000000697-9371.357ENSATEG00000000976-9471.924Anabas_testudineus
ENSSSCG00000000697-9083.004ENSATEG00000016428chd4a9586.192Anabas_testudineus
ENSSSCG00000000697-9988.592ENSAPLG00000014146-10088.519Anas_platyrhynchos
ENSSSCG00000000697-9989.823ENSACAG00000006231-10089.384Anolis_carolinensis
ENSSSCG00000000697-10099.108ENSANAG00000035685-10099.108Aotus_nancymaae
ENSSSCG00000000697-9477.469ENSACLG00000015837chd4a9677.468Astatotilapia_calliptera
ENSSSCG00000000697-9576.474ENSACLG00000024468-9578.604Astatotilapia_calliptera
ENSSSCG00000000697-9680.883ENSAMXG00000019969chd4a9879.158Astyanax_mexicanus
ENSSSCG00000000697-9578.237ENSAMXG00000010614-9678.588Astyanax_mexicanus
ENSSSCG00000000697-10099.006ENSBTAG00000014734CHD410099.006Bos_taurus
ENSSSCG00000000697-10099.007ENSCJAG00000008114-10099.007Callithrix_jacchus
ENSSSCG00000000697-10099.425ENSCAFG00000014929CHD410099.425Canis_familiaris
ENSSSCG00000000697-10098.793ENSCAFG00020002892-10098.793Canis_lupus_dingo
ENSSSCG00000000697-10098.950ENSCHIG00000020766-10098.950Capra_hircus
ENSSSCG00000000697-9997.533ENSTSYG00000006069-9997.533Carlito_syrichta
ENSSSCG00000000697-9898.936ENSCPOG00000008504-9998.936Cavia_porcellus
ENSSSCG00000000697-10099.059ENSCCAG00000009686-10099.059Cebus_capucinus
ENSSSCG00000000697-10099.059ENSCATG00000006345-10099.059Cercocebus_atys
ENSSSCG00000000697-10099.108ENSCLAG00000012244-10099.108Chinchilla_lanigera
ENSSSCG00000000697-10099.007ENSCSAG00000010429-10099.007Chlorocebus_sabaeus
ENSSSCG00000000697-83100.000ENSCHOG00000000277-8599.200Choloepus_hoffmanni
ENSSSCG00000000697-9990.661ENSCPBG00000027716-9690.781Chrysemys_picta_bellii
ENSSSCG00000000697-9254.981ENSCSAVG00000004448-9961.783Ciona_savignyi
ENSSSCG00000000697-10094.410ENSCANG00000035317-10097.416Colobus_angolensis_palliatus
ENSSSCG00000000697-10097.866ENSCGRG00001020662Chd410097.866Cricetulus_griseus_chok1gshd
ENSSSCG00000000697-9998.177ENSCGRG00000015920Chd410098.177Cricetulus_griseus_crigri
ENSSSCG00000000697-8988.235ENSCSEG00000017173chd4a9288.235Cynoglossus_semilaevis
ENSSSCG00000000697-9270.618ENSCSEG00000018096-9269.655Cynoglossus_semilaevis
ENSSSCG00000000697-9578.009ENSCSEG00000019943-9877.310Cynoglossus_semilaevis
ENSSSCG00000000697-9271.468ENSCVAG00000016412-9471.380Cyprinodon_variegatus
ENSSSCG00000000697-9577.250ENSCVAG00000001128-9678.246Cyprinodon_variegatus
ENSSSCG00000000697-8993.151ENSCVAG00000004940chd4a9092.727Cyprinodon_variegatus
ENSSSCG00000000697-9677.725ENSDARG00000063535chd4a9378.395Danio_rerio
ENSSSCG00000000697-10098.589ENSDNOG00000001134-10098.589Dasypus_novemcinctus
ENSSSCG00000000697-9997.119ENSDORG00000001847Chd49897.119Dipodomys_ordii
ENSSSCG00000000697-7873.351ENSEBUG00000012670chd4a9275.653Eptatretus_burgeri
ENSSSCG00000000697-10099.320ENSEASG00005016150-10099.320Equus_asinus_asinus
ENSSSCG00000000697-10099.268ENSECAG00000022005CHD410099.268Equus_caballus
ENSSSCG00000000697-9279.372ENSELUG00000021276chd4a9189.030Esox_lucius
ENSSSCG00000000697-9578.202ENSELUG00000018086-9779.104Esox_lucius
ENSSSCG00000000697-10099.582ENSFCAG00000006877-10099.582Felis_catus
ENSSSCG00000000697-8393.814ENSFALG00000004785-9794.315Ficedula_albicollis
ENSSSCG00000000697-10096.878ENSFDAG00000020219-10096.878Fukomys_damarensis
ENSSSCG00000000697-9271.606ENSFHEG00000003253-9280.531Fundulus_heteroclitus
ENSSSCG00000000697-8778.261ENSFHEG00000012736-9779.039Fundulus_heteroclitus
ENSSSCG00000000697-9576.726ENSFHEG00000002013chd4a9577.061Fundulus_heteroclitus
ENSSSCG00000000697-5288.259ENSGMOG00000003394-7888.259Gadus_morhua
ENSSSCG00000000697-5584.488ENSGMOG00000015722chd4a9385.944Gadus_morhua
ENSSSCG00000000697-7097.561ENSGMOG00000017923-7793.939Gadus_morhua
ENSSSCG00000000697-6291.286ENSGALG00000013565-9891.609Gallus_gallus
ENSSSCG00000000697-9775.652ENSGAFG00000002778chd4a9377.020Gambusia_affinis
ENSSSCG00000000697-8391.743ENSGAFG00000014337-9688.462Gambusia_affinis
ENSSSCG00000000697-5482.019ENSGACG00000010099-9282.341Gasterosteus_aculeatus
ENSSSCG00000000697-9575.909ENSGACG00000018705chd4a9975.570Gasterosteus_aculeatus
ENSSSCG00000000697-10090.942ENSGAGG00000001416-9790.942Gopherus_agassizii
ENSSSCG00000000697-10099.006ENSGGOG00000001930CHD410099.006Gorilla_gorilla
ENSSSCG00000000697-9180.200ENSHBUG00000019146chd4a9575.153Haplochromis_burtoni
ENSSSCG00000000697-9576.474ENSHBUG00000016000-9578.251Haplochromis_burtoni
ENSSSCG00000000697-10098.845ENSHGLG00000003093-10098.845Heterocephalus_glaber_female
ENSSSCG00000000697-10098.797ENSHGLG00100007450-10098.797Heterocephalus_glaber_male
ENSSSCG00000000697-9074.605ENSHCOG00000017525-9585.946Hippocampus_comes
ENSSSCG00000000697-8469.240ENSHCOG00000014308-8873.791Hippocampus_comes
ENSSSCG00000000697-9580.207ENSIPUG00000005694chd49680.960Ictalurus_punctatus
ENSSSCG00000000697-9999.056ENSSTOG00000007601-9999.056Ictidomys_tridecemlineatus
ENSSSCG00000000697-10097.856ENSJJAG00000012394Chd410097.895Jaculus_jaculus
ENSSSCG00000000697-9974.233ENSKMAG00000007932-9277.166Kryptolebias_marmoratus
ENSSSCG00000000697-9370.770ENSKMAG00000017827-9079.736Kryptolebias_marmoratus
ENSSSCG00000000697-9576.674ENSKMAG00000019286chd4a9577.078Kryptolebias_marmoratus
ENSSSCG00000000697-9575.626ENSLBEG00000012434CHD48585.200Labrus_bergylta
ENSSSCG00000000697-7973.898ENSLBEG00000026652-9573.221Labrus_bergylta
ENSSSCG00000000697-9975.025ENSLOCG00000007438chd4a9576.335Lepisosteus_oculatus
ENSSSCG00000000697-10096.201ENSLAFG00000022842-10096.201Loxodonta_africana
ENSSSCG00000000697-10099.111ENSMFAG00000003188-10099.111Macaca_fascicularis
ENSSSCG00000000697-10097.526ENSMMUG00000018685-10097.526Macaca_mulatta
ENSSSCG00000000697-10097.126ENSMNEG00000044776-10097.126Macaca_nemestrina
ENSSSCG00000000697-10097.022ENSMLEG00000024661-10097.022Mandrillus_leucophaeus
ENSSSCG00000000697-9877.923ENSMAMG00000018954chd4a9677.665Mastacembelus_armatus
ENSSSCG00000000697-9271.253ENSMAMG00000002137-9171.840Mastacembelus_armatus
ENSSSCG00000000697-9674.379ENSMAMG00000002584-8985.714Mastacembelus_armatus
ENSSSCG00000000697-9477.481ENSMZEG00005001706chd4a9677.455Maylandia_zebra
ENSSSCG00000000697-9576.420ENSMZEG00005017761-9578.195Maylandia_zebra
ENSSSCG00000000697-9990.857ENSMGAG00000014084-10090.508Meleagris_gallopavo
ENSSSCG00000000697-10099.372ENSMICG00000006588-10099.372Microcebus_murinus
ENSSSCG00000000697-10098.277ENSMOCG00000020624Chd410098.277Microtus_ochrogaster
ENSSSCG00000000697-8470.547ENSMMOG00000013429-8675.406Mola_mola
ENSSSCG00000000697-9577.194ENSMMOG00000000073chd4a9976.739Mola_mola
ENSSSCG00000000697-9575.529ENSMMOG00000015971-9576.322Mola_mola
ENSSSCG00000000697-8295.777ENSMODG00000018094-10095.777Monodelphis_domestica
ENSSSCG00000000697-9577.778ENSMALG00000005766chd4a9377.672Monopterus_albus
ENSSSCG00000000697-9575.497ENSMALG00000022494-9577.026Monopterus_albus
ENSSSCG00000000697-10098.068ENSMUSG00000063870Chd410098.068Mus_musculus
ENSSSCG00000000697-10098.070MGP_SPRETEiJ_G0029911Chd410098.070Mus_spretus
ENSSSCG00000000697-10099.529ENSMPUG00000016859-10099.529Mustela_putorius_furo
ENSSSCG00000000697-10099.006ENSMLUG00000014343-9999.006Myotis_lucifugus
ENSSSCG00000000697-10097.123ENSNGAG00000016920Chd410097.123Nannospalax_galili
ENSSSCG00000000697-9576.366ENSNBRG00000021576-9578.363Neolamprologus_brichardi
ENSSSCG00000000697-9997.733ENSNLEG00000004330-9697.733Nomascus_leucogenys
ENSSSCG00000000697-8499.200ENSMEUG00000015294-8499.200Notamacropus_eugenii
ENSSSCG00000000697-8798.305ENSOPRG00000003477-8498.305Ochotona_princeps
ENSSSCG00000000697-9998.791ENSODEG00000003114-9998.791Octodon_degus
ENSSSCG00000000697-9876.173ENSONIG00000012953-9478.699Oreochromis_niloticus
ENSSSCG00000000697-9578.671ENSONIG00000006992chd4a9379.545Oreochromis_niloticus
ENSSSCG00000000697-10096.757ENSOCUG00000008215-9996.757Oryctolagus_cuniculus
ENSSSCG00000000697-9670.636ENSORLG00000017190-9082.273Oryzias_latipes
ENSSSCG00000000697-9576.899ENSORLG00000006310chd4a9377.298Oryzias_latipes
ENSSSCG00000000697-9676.452ENSORLG00000012477-9676.794Oryzias_latipes
ENSSSCG00000000697-7675.193ENSORLG00020011739-8675.088Oryzias_latipes_hni
ENSSSCG00000000697-9675.519ENSORLG00020004891-9275.935Oryzias_latipes_hni
ENSSSCG00000000697-9576.728ENSORLG00020006529chd4a9377.024Oryzias_latipes_hni
ENSSSCG00000000697-9578.575ENSORLG00015019674chd4a9678.339Oryzias_latipes_hsok
ENSSSCG00000000697-9577.802ENSORLG00015010692-9678.268Oryzias_latipes_hsok
ENSSSCG00000000697-9082.576ENSOMEG00000016394chd4a9092.377Oryzias_melastigma
ENSSSCG00000000697-9268.882ENSOMEG00000014929-9368.459Oryzias_melastigma
ENSSSCG00000000697-9676.940ENSOMEG00000013408-7380.524Oryzias_melastigma
ENSSSCG00000000697-10097.784ENSOGAG00000010031-10097.784Otolemur_garnettii
ENSSSCG00000000697-9898.937ENSOARG00000007398-10098.937Ovis_aries
ENSSSCG00000000697-10098.903ENSPPAG00000029007-10098.903Pan_paniscus
ENSSSCG00000000697-10099.477ENSPPRG00000001388-10099.477Panthera_pardus
ENSSSCG00000000697-10099.529ENSPTIG00000010979-10099.529Panthera_tigris_altaica
ENSSSCG00000000697-10099.006ENSPTRG00000004580CHD410099.006Pan_troglodytes
ENSSSCG00000000697-10099.007ENSPANG00000025409-10099.007Papio_anubis
ENSSSCG00000000697-9879.171ENSPKIG00000008268chd4a9380.696Paramormyrops_kingsleyae
ENSSSCG00000000697-9670.666ENSPKIG00000012023-9572.273Paramormyrops_kingsleyae
ENSSSCG00000000697-9988.969ENSPSIG00000015546-9988.620Pelodiscus_sinensis
ENSSSCG00000000697-9070.662ENSPMGG00000007681-9969.780Periophthalmus_magnuspinnatus
ENSSSCG00000000697-9380.045ENSPMGG00000022981chd4a9779.370Periophthalmus_magnuspinnatus
ENSSSCG00000000697-10096.082ENSPEMG00000010290Chd410096.082Peromyscus_maniculatus_bairdii
ENSSSCG00000000697-9297.604ENSPCIG00000001846-10097.604Phascolarctos_cinereus
ENSSSCG00000000697-8870.816ENSPFOG00000016981-9270.746Poecilia_formosa
ENSSSCG00000000697-9575.437ENSPFOG00000013889-9676.164Poecilia_formosa
ENSSSCG00000000697-9494.419ENSPFOG00000009089chd4a9378.431Poecilia_formosa
ENSSSCG00000000697-9576.103ENSPLAG00000004006-9179.675Poecilia_latipinna
ENSSSCG00000000697-9776.878ENSPLAG00000012712chd4a9377.540Poecilia_latipinna
ENSSSCG00000000697-9271.396ENSPMEG00000015657-9471.163Poecilia_mexicana
ENSSSCG00000000697-9575.463ENSPMEG00000006064-9676.094Poecilia_mexicana
ENSSSCG00000000697-9577.332ENSPMEG00000009633chd4a9477.978Poecilia_mexicana
ENSSSCG00000000697-9270.443ENSPREG00000014285-9371.218Poecilia_reticulata
ENSSSCG00000000697-9575.864ENSPREG00000011359-9277.502Poecilia_reticulata
ENSSSCG00000000697-8794.500ENSPREG00000001202chd4a9094.500Poecilia_reticulata
ENSSSCG00000000697-9996.331ENSPPYG00000004192-10096.331Pongo_abelii
ENSSSCG00000000697-73100.000ENSPCAG00000007120-85100.000Procavia_capensis
ENSSSCG00000000697-10098.692ENSPCOG00000018635-10098.692Propithecus_coquereli
ENSSSCG00000000697-9897.692ENSPVAG00000012574-10097.692Pteropus_vampyrus
ENSSSCG00000000697-9874.338ENSPNYG00000023020-9276.676Pundamilia_nyererei
ENSSSCG00000000697-9579.022ENSPNYG00000002663chd4a9479.048Pundamilia_nyererei
ENSSSCG00000000697-9578.007ENSPNAG00000011129-9478.865Pygocentrus_nattereri
ENSSSCG00000000697-9184.218ENSPNAG00000009629chd4a9287.137Pygocentrus_nattereri
ENSSSCG00000000697-10097.605ENSRNOG00000018309Chd410097.605Rattus_norvegicus
ENSSSCG00000000697-9999.141ENSRBIG00000041491-10099.136Rhinopithecus_bieti
ENSSSCG00000000697-10099.163ENSRROG00000042446-10099.163Rhinopithecus_roxellana
ENSSSCG00000000697-10098.005ENSSBOG00000020782-99100.000Saimiri_boliviensis_boliviensis
ENSSSCG00000000697-9682.840ENSSHAG00000015079-9594.595Sarcophilus_harrisii
ENSSSCG00000000697-9877.490ENSSFOG00015002908chd49680.609Scleropages_formosus
ENSSSCG00000000697-9277.886ENSSMAG00000010969-9574.682Scophthalmus_maximus
ENSSSCG00000000697-9595.673ENSSMAG00000012594chd4a9578.080Scophthalmus_maximus
ENSSSCG00000000697-9269.150ENSSMAG00000017926-7471.955Scophthalmus_maximus
ENSSSCG00000000697-9479.793ENSSDUG00000012051-9376.159Seriola_dumerili
ENSSSCG00000000697-9279.786ENSSDUG00000002891chd4a9779.045Seriola_dumerili
ENSSSCG00000000697-9470.203ENSSLDG00000019750-9570.569Seriola_lalandi_dorsalis
ENSSSCG00000000697-9874.020ENSSLDG00000018645chd4a9877.183Seriola_lalandi_dorsalis
ENSSSCG00000000697-9083.241ENSSLDG00000023821-8786.311Seriola_lalandi_dorsalis
ENSSSCG00000000697-70100.000ENSSARG00000012988-72100.000Sorex_araneus
ENSSSCG00000000697-9989.086ENSSPUG00000015131-10089.741Sphenodon_punctatus
ENSSSCG00000000697-9371.628ENSSPAG00000018749-9471.301Stegastes_partitus
ENSSSCG00000000697-9578.965ENSSPAG00000013983chd4a9978.322Stegastes_partitus
ENSSSCG00000000697-9990.224ENSTGUG00000013329-10090.016Taeniopygia_guttata
ENSSSCG00000000697-9271.792ENSTRUG00000007623-8777.974Takifugu_rubripes
ENSSSCG00000000697-9577.046ENSTRUG00000007202-9976.271Takifugu_rubripes
ENSSSCG00000000697-9577.083ENSTNIG00000008031-9876.659Tetraodon_nigroviridis
ENSSSCG00000000697-9666.757ENSTNIG00000004095-9577.287Tetraodon_nigroviridis
ENSSSCG00000000697-85100.000ENSTBEG00000011379-90100.000Tupaia_belangeri
ENSSSCG00000000697-94100.000ENSTTRG00000016102-10093.599Tursiops_truncatus
ENSSSCG00000000697-10099.249ENSUAMG00000016452-10099.194Ursus_americanus
ENSSSCG00000000697-10097.746ENSUMAG00000005336-10097.688Ursus_maritimus
ENSSSCG00000000697-10099.425ENSVVUG00000011414-10099.425Vulpes_vulpes
ENSSSCG00000000697-6687.317ENSXETG00000026410chd49992.352Xenopus_tropicalis
ENSSSCG00000000697-5482.417ENSXETG00000018961-9982.029Xenopus_tropicalis
ENSSSCG00000000697-9576.381ENSXCOG00000019269-9676.322Xiphophorus_couchianus
ENSSSCG00000000697-7983.085ENSXMAG00000001037chd4a8883.581Xiphophorus_maculatus
ENSSSCG00000000697-9371.904ENSXMAG00000014686-9382.727Xiphophorus_maculatus
ENSSSCG00000000697-9576.490ENSXMAG00000011263-9675.910Xiphophorus_maculatus

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