EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000000870 (Gene tree)
Gene ID: 595113
Gene Symbol: ARL1
Alias: ARFL1
Full Name: ADP ribosylation factor like GTPase 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 18493 bases
Position: chr5:82795620-82814112
Accession: 595113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000000930	MMR_HSR1	PF01926.23	0.00011	1	1
ENSSSCP00000033192	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000043304	ARL1-201	5373	-	ENSSSCP00000033192	181 (aa)	-	Q52NJ5
ENSSSCT00000000950	ARL1-202	3306	XM_021091204	ENSSSCP00000000930	181 (aa)	XP_020946863	Q52NJ5

Gene Model

Click here to download ENSSSCG00000000870's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000870's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000000870	ARL1	100	56.906	ENSSSCG00000031381	-	92	58.434
ENSSSCG00000000870	ARL1	91	43.030	ENSSSCG00000034387	ARL2-SNX15	78	43.030
ENSSSCG00000000870	ARL1	81	57.823	ENSSSCG00000005012	ARF6	93	59.854
ENSSSCG00000000870	ARL1	94	36.723	ENSSSCG00000027278	ARL6	90	36.905
ENSSSCG00000000870	ARL1	99	48.889	ENSSSCG00000031541	ARL5A	92	49.697
ENSSSCG00000000870	ARL1	96	32.759	ENSSSCG00000011535	-	89	31.928
ENSSSCG00000000870	ARL1	90	47.853	ENSSSCG00000031782	ARL3	90	48.701
ENSSSCG00000000870	ARL1	100	57.459	ENSSSCG00000031893	-	92	57.831
ENSSSCG00000000870	ARL1	97	39.560	ENSSSCG00000032709	ARL4A	86	38.953
ENSSSCG00000000870	ARL1	98	33.333	ENSSSCG00000035304	ARFRP1	85	34.682
ENSSSCG00000000870	ARL1	91	40.719	ENSSSCG00000011734	ARL14	87	40.719
ENSSSCG00000000870	ARL1	91	35.294	ENSSSCG00000017380	ARL4D	85	35.294
ENSSSCG00000000870	ARL1	99	48.889	ENSSSCG00000031456	ARL5B	92	49.398
ENSSSCG00000000870	ARL1	64	33.071	ENSSSCG00000007513	RAB22A	61	33.071
ENSSSCG00000000870	ARL1	99	58.889	ENSSSCG00000031791	ARF4	92	58.788
ENSSSCG00000000870	ARL1	82	33.987	ENSSSCG00000029985	ARL10	61	33.987
ENSSSCG00000000870	ARL1	96	32.759	ENSSSCG00000036967	ARL8A	89	32.530
ENSSSCG00000000870	ARL1	97	39.779	ENSSSCG00000034293	ARL4C	90	40.698
ENSSSCG00000000870	ARL1	100	56.906	ENSSSCG00000013992	-	92	57.831
ENSSSCG00000000870	ARL1	99	58.333	ENSSSCG00000016593	ARF5	92	59.394
ENSSSCG00000000870	ARL1	90	40.244	ENSSSCG00000036810	ARL11	83	40.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000870	ARL1	100	99.448	ENSG00000120805	ARL1	100	99.448	Homo_sapiens
ENSSSCG00000000870	ARL1	100	92.818	ENSAPOG00000002469	arl1	95	94.012	Acanthochromis_polyacanthus
ENSSSCG00000000870	ARL1	99	99.444	ENSAMEG00000016452	ARL1	99	99.444	Ailuropoda_melanoleuca
ENSSSCG00000000870	ARL1	99	91.620	ENSACIG00000007953	arl1	93	92.216	Amphilophus_citrinellus
ENSSSCG00000000870	ARL1	100	92.818	ENSAOCG00000013008	arl1	92	94.012	Amphiprion_ocellaris
ENSSSCG00000000870	ARL1	100	92.818	ENSAPEG00000013187	arl1	95	94.012	Amphiprion_percula
ENSSSCG00000000870	ARL1	99	94.413	ENSATEG00000005559	arl1	90	95.210	Anabas_testudineus
ENSSSCG00000000870	ARL1	100	96.133	ENSAPLG00000016092	ARL1	100	96.133	Anas_platyrhynchos
ENSSSCG00000000870	ARL1	100	97.790	ENSACAG00000011602	ARL1	100	97.790	Anolis_carolinensis
ENSSSCG00000000870	ARL1	100	100.000	ENSANAG00000023491	ARL1	100	100.000	Aotus_nancymaae
ENSSSCG00000000870	ARL1	100	93.923	ENSACLG00000008188	arl1	92	94.611	Astatotilapia_calliptera
ENSSSCG00000000870	ARL1	100	95.580	ENSAMXG00000021056	arl1	96	96.407	Astyanax_mexicanus
ENSSSCG00000000870	ARL1	100	100.000	ENSBTAG00000011883	ARL1	100	100.000	Bos_taurus
ENSSSCG00000000870	ARL1	100	71.823	WBGene00000187	arl-1	93	73.054	Caenorhabditis_elegans
ENSSSCG00000000870	ARL1	100	100.000	ENSCJAG00000001966	ARL1	100	100.000	Callithrix_jacchus
ENSSSCG00000000870	ARL1	100	100.000	ENSCAFG00000006992	ARL1	100	100.000	Canis_familiaris
ENSSSCG00000000870	ARL1	100	100.000	ENSCAFG00020024333	ARL1	100	100.000	Canis_lupus_dingo
ENSSSCG00000000870	ARL1	94	100.000	ENSCHIG00000024524	ARL1	100	100.000	Capra_hircus
ENSSSCG00000000870	ARL1	99	100.000	ENSTSYG00000013257	-	100	100.000	Carlito_syrichta
ENSSSCG00000000870	ARL1	76	98.551	ENSCAPG00000001010	ARL1	100	98.551	Cavia_aperea
ENSSSCG00000000870	ARL1	100	98.895	ENSCPOG00000026014	ARL1	100	98.895	Cavia_porcellus
ENSSSCG00000000870	ARL1	100	100.000	ENSCCAG00000025938	ARL1	100	100.000	Cebus_capucinus
ENSSSCG00000000870	ARL1	100	97.790	ENSCLAG00000008180	ARL1	100	97.790	Chinchilla_lanigera
ENSSSCG00000000870	ARL1	100	99.448	ENSCSAG00000003368	ARL1	100	99.448	Chlorocebus_sabaeus
ENSSSCG00000000870	ARL1	100	96.685	ENSCPBG00000004906	ARL1	100	96.685	Chrysemys_picta_bellii
ENSSSCG00000000870	ARL1	88	44.444	ENSCING00000004577	-	92	44.375	Ciona_intestinalis
ENSSSCG00000000870	ARL1	99	78.889	ENSCING00000019794	-	92	78.182	Ciona_intestinalis
ENSSSCG00000000870	ARL1	99	78.333	ENSCSAVG00000007620	-	90	77.576	Ciona_savignyi
ENSSSCG00000000870	ARL1	100	98.895	ENSCANG00000033548	ARL1	100	98.895	Colobus_angolensis_palliatus
ENSSSCG00000000870	ARL1	100	99.448	ENSCGRG00001010446	Arl1	100	99.448	Cricetulus_griseus_chok1gshd
ENSSSCG00000000870	ARL1	100	98.343	ENSCGRG00000009856	Arl1	90	98.343	Cricetulus_griseus_crigri
ENSSSCG00000000870	ARL1	100	93.370	ENSCVAG00000001731	arl1	92	94.012	Cyprinodon_variegatus
ENSSSCG00000000870	ARL1	100	95.028	ENSDARG00000101680	arl1	92	96.203	Danio_rerio
ENSSSCG00000000870	ARL1	100	99.448	ENSDORG00000014770	Arl1	95	99.448	Dipodomys_ordii
ENSSSCG00000000870	ARL1	100	78.453	FBgn0000115	Arl1	93	80.838	Drosophila_melanogaster
ENSSSCG00000000870	ARL1	98	97.191	ENSETEG00000020310	ARL1	100	97.191	Echinops_telfairi
ENSSSCG00000000870	ARL1	100	100.000	ENSEASG00005020057	ARL1	100	100.000	Equus_asinus_asinus
ENSSSCG00000000870	ARL1	100	100.000	ENSECAG00000000372	ARL1	100	100.000	Equus_caballus
ENSSSCG00000000870	ARL1	100	95.028	ENSELUG00000018440	arl1	92	96.407	Esox_lucius
ENSSSCG00000000870	ARL1	100	93.923	ENSELUG00000001287	-	92	94.611	Esox_lucius
ENSSSCG00000000870	ARL1	100	100.000	ENSFCAG00000030871	ARL1	100	100.000	Felis_catus
ENSSSCG00000000870	ARL1	100	96.685	ENSFALG00000011156	ARL1	100	96.685	Ficedula_albicollis
ENSSSCG00000000870	ARL1	100	98.343	ENSFDAG00000016393	ARL1	100	98.343	Fukomys_damarensis
ENSSSCG00000000870	ARL1	99	93.855	ENSFHEG00000004171	arl1	88	94.611	Fundulus_heteroclitus
ENSSSCG00000000870	ARL1	100	93.923	ENSGMOG00000006859	arl1	92	94.611	Gadus_morhua
ENSSSCG00000000870	ARL1	100	96.685	ENSGALG00000011651	ARL1	100	96.685	Gallus_gallus
ENSSSCG00000000870	ARL1	91	94.545	ENSGAFG00000006973	arl1	95	95.570	Gambusia_affinis
ENSSSCG00000000870	ARL1	100	93.923	ENSGACG00000019098	arl1	92	95.210	Gasterosteus_aculeatus
ENSSSCG00000000870	ARL1	100	99.448	ENSGGOG00000010788	ARL1	100	99.448	Gorilla_gorilla
ENSSSCG00000000870	ARL1	100	93.923	ENSHBUG00000010636	arl1	92	94.611	Haplochromis_burtoni
ENSSSCG00000000870	ARL1	100	99.448	ENSHGLG00000004909	ARL1	100	99.448	Heterocephalus_glaber_female
ENSSSCG00000000870	ARL1	100	98.895	ENSHGLG00100001832	ARL1	100	98.895	Heterocephalus_glaber_male
ENSSSCG00000000870	ARL1	100	95.028	ENSHCOG00000005566	arl1	92	95.210	Hippocampus_comes
ENSSSCG00000000870	ARL1	99	94.972	ENSIPUG00000013834	arl1	90	95.808	Ictalurus_punctatus
ENSSSCG00000000870	ARL1	100	100.000	ENSSTOG00000016022	ARL1	100	100.000	Ictidomys_tridecemlineatus
ENSSSCG00000000870	ARL1	92	89.222	ENSJJAG00000000452	-	92	89.222	Jaculus_jaculus
ENSSSCG00000000870	ARL1	86	96.129	ENSKMAG00000005931	arl1	84	96.129	Kryptolebias_marmoratus
ENSSSCG00000000870	ARL1	96	92.529	ENSLBEG00000000991	arl1	95	93.413	Labrus_bergylta
ENSSSCG00000000870	ARL1	100	100.000	ENSLAFG00000026143	ARL1	95	100.000	Loxodonta_africana
ENSSSCG00000000870	ARL1	100	99.448	ENSMFAG00000035725	ARL1	100	99.448	Macaca_fascicularis
ENSSSCG00000000870	ARL1	100	98.895	ENSMMUG00000031610	ARL1	100	98.895	Macaca_mulatta
ENSSSCG00000000870	ARL1	100	99.448	ENSMNEG00000007067	ARL1	100	99.448	Macaca_nemestrina
ENSSSCG00000000870	ARL1	91	99.390	ENSMLEG00000036143	ARL1	100	99.390	Mandrillus_leucophaeus
ENSSSCG00000000870	ARL1	99	92.737	ENSMAMG00000001968	arl1	93	93.413	Mastacembelus_armatus
ENSSSCG00000000870	ARL1	100	93.923	ENSMZEG00005018136	arl1	92	94.611	Maylandia_zebra
ENSSSCG00000000870	ARL1	100	96.133	ENSMGAG00000011748	ARL1	100	96.133	Meleagris_gallopavo
ENSSSCG00000000870	ARL1	100	98.895	ENSMAUG00000021923	Arl1	100	98.895	Mesocricetus_auratus
ENSSSCG00000000870	ARL1	100	100.000	ENSMICG00000015801	ARL1	100	100.000	Microcebus_murinus
ENSSSCG00000000870	ARL1	100	99.448	ENSMOCG00000005852	Arl1	100	99.448	Microtus_ochrogaster
ENSSSCG00000000870	ARL1	96	90.805	ENSMMOG00000003353	arl1	63	93.125	Mola_mola
ENSSSCG00000000870	ARL1	100	98.343	ENSMODG00000003056	ARL1	100	98.343	Monodelphis_domestica
ENSSSCG00000000870	ARL1	99	91.061	ENSMALG00000003003	arl1	99	93.939	Monopterus_albus
ENSSSCG00000000870	ARL1	100	99.448	MGP_CAROLIEiJ_G0015712	Arl1	100	99.448	Mus_caroli
ENSSSCG00000000870	ARL1	100	99.448	ENSMUSG00000060904	Arl1	100	99.448	Mus_musculus
ENSSSCG00000000870	ARL1	100	99.448	MGP_PahariEiJ_G0031373	Arl1	100	99.448	Mus_pahari
ENSSSCG00000000870	ARL1	100	99.448	MGP_SPRETEiJ_G0016530	Arl1	100	99.448	Mus_spretus
ENSSSCG00000000870	ARL1	99	99.448	ENSMPUG00000011822	ARL1	99	99.448	Mustela_putorius_furo
ENSSSCG00000000870	ARL1	92	94.012	ENSMLUG00000025321	-	92	94.012	Myotis_lucifugus
ENSSSCG00000000870	ARL1	95	99.419	ENSMLUG00000002351	-	100	99.419	Myotis_lucifugus
ENSSSCG00000000870	ARL1	76	99.275	ENSNGAG00000007879	-	100	99.275	Nannospalax_galili
ENSSSCG00000000870	ARL1	100	93.923	ENSNBRG00000019783	arl1	92	94.611	Neolamprologus_brichardi
ENSSSCG00000000870	ARL1	91	99.390	ENSNLEG00000006223	ARL1	100	99.390	Nomascus_leucogenys
ENSSSCG00000000870	ARL1	100	98.343	ENSMEUG00000015525	ARL1	95	98.343	Notamacropus_eugenii
ENSSSCG00000000870	ARL1	100	99.448	ENSODEG00000019783	-	100	99.448	Octodon_degus
ENSSSCG00000000870	ARL1	99	99.444	ENSODEG00000010531	-	100	99.444	Octodon_degus
ENSSSCG00000000870	ARL1	100	97.790	ENSODEG00000019880	-	100	97.790	Octodon_degus
ENSSSCG00000000870	ARL1	100	93.923	ENSONIG00000009921	arl1	92	94.611	Oreochromis_niloticus
ENSSSCG00000000870	ARL1	100	100.000	ENSOCUG00000002217	ARL1	96	100.000	Oryctolagus_cuniculus
ENSSSCG00000000870	ARL1	92	93.976	ENSORLG00000008909	arl1	93	95.570	Oryzias_latipes
ENSSSCG00000000870	ARL1	100	93.923	ENSORLG00020005754	arl1	93	94.611	Oryzias_latipes_hni
ENSSSCG00000000870	ARL1	100	93.923	ENSORLG00015002736	arl1	93	95.570	Oryzias_latipes_hsok
ENSSSCG00000000870	ARL1	96	93.678	ENSOMEG00000023497	arl1	89	94.611	Oryzias_melastigma
ENSSSCG00000000870	ARL1	100	99.448	ENSOGAG00000015144	ARL1	100	99.448	Otolemur_garnettii
ENSSSCG00000000870	ARL1	100	100.000	ENSOARG00000015007	ARL1	100	100.000	Ovis_aries
ENSSSCG00000000870	ARL1	100	99.448	ENSPPAG00000034860	ARL1	100	99.448	Pan_paniscus
ENSSSCG00000000870	ARL1	100	100.000	ENSPPRG00000023908	ARL1	100	100.000	Panthera_pardus
ENSSSCG00000000870	ARL1	99	100.000	ENSPTIG00000002154	-	100	100.000	Panthera_tigris_altaica
ENSSSCG00000000870	ARL1	100	99.448	ENSPTRG00000005350	ARL1	100	99.448	Pan_troglodytes
ENSSSCG00000000870	ARL1	100	98.895	ENSPANG00000018816	ARL1	97	99.441	Papio_anubis
ENSSSCG00000000870	ARL1	100	95.028	ENSPKIG00000007118	arl1	100	96.341	Paramormyrops_kingsleyae
ENSSSCG00000000870	ARL1	100	97.238	ENSPSIG00000006539	ARL1	100	97.238	Pelodiscus_sinensis
ENSSSCG00000000870	ARL1	91	92.727	ENSPMGG00000004070	arl1	93	93.671	Periophthalmus_magnuspinnatus
ENSSSCG00000000870	ARL1	100	99.448	ENSPEMG00000008781	Arl1	100	99.448	Peromyscus_maniculatus_bairdii
ENSSSCG00000000870	ARL1	100	91.160	ENSPMAG00000002070	arl1	92	94.012	Petromyzon_marinus
ENSSSCG00000000870	ARL1	99	98.333	ENSPCIG00000009683	-	97	98.333	Phascolarctos_cinereus
ENSSSCG00000000870	ARL1	100	93.923	ENSPFOG00000003241	arl1	92	94.611	Poecilia_formosa
ENSSSCG00000000870	ARL1	100	93.923	ENSPLAG00000012898	arl1	92	94.611	Poecilia_latipinna
ENSSSCG00000000870	ARL1	99	93.889	ENSPMEG00000005938	arl1	89	94.611	Poecilia_mexicana
ENSSSCG00000000870	ARL1	99	93.889	ENSPREG00000013361	arl1	89	94.611	Poecilia_reticulata
ENSSSCG00000000870	ARL1	100	99.448	ENSPPYG00000004872	ARL1	100	99.448	Pongo_abelii
ENSSSCG00000000870	ARL1	100	96.133	ENSPCOG00000015554	-	100	96.133	Propithecus_coquereli
ENSSSCG00000000870	ARL1	100	100.000	ENSPVAG00000008119	ARL1	95	100.000	Pteropus_vampyrus
ENSSSCG00000000870	ARL1	100	93.923	ENSPNYG00000011671	arl1	92	94.611	Pundamilia_nyererei
ENSSSCG00000000870	ARL1	91	95.758	ENSPNAG00000028795	arl1	95	96.835	Pygocentrus_nattereri
ENSSSCG00000000870	ARL1	100	99.448	ENSRNOG00000005763	Arl1	100	99.448	Rattus_norvegicus
ENSSSCG00000000870	ARL1	100	99.448	ENSRBIG00000042560	ARL1	100	99.448	Rhinopithecus_bieti
ENSSSCG00000000870	ARL1	100	99.448	ENSRROG00000037996	ARL1	100	99.448	Rhinopithecus_roxellana
ENSSSCG00000000870	ARL1	100	100.000	ENSSBOG00000024352	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000000870	ARL1	100	97.790	ENSSHAG00000004634	ARL1	100	97.790	Sarcophilus_harrisii
ENSSSCG00000000870	ARL1	100	95.028	ENSSFOG00015001665	arl1	92	95.808	Scleropages_formosus
ENSSSCG00000000870	ARL1	100	94.475	ENSSMAG00000016416	arl1	92	94.611	Scophthalmus_maximus
ENSSSCG00000000870	ARL1	93	93.491	ENSSDUG00000013898	arl1	89	96.203	Seriola_dumerili
ENSSSCG00000000870	ARL1	100	94.475	ENSSLDG00000012946	arl1	92	95.210	Seriola_lalandi_dorsalis
ENSSSCG00000000870	ARL1	99	98.883	ENSSARG00000013944	ARL1	100	98.883	Sorex_araneus
ENSSSCG00000000870	ARL1	100	97.790	ENSSPUG00000004578	ARL1	100	97.790	Sphenodon_punctatus
ENSSSCG00000000870	ARL1	100	93.370	ENSSPAG00000014633	arl1	93	94.611	Stegastes_partitus
ENSSSCG00000000870	ARL1	99	96.648	ENSTGUG00000009085	-	100	96.648	Taeniopygia_guttata
ENSSSCG00000000870	ARL1	100	91.713	ENSTRUG00000006254	arl1	92	92.216	Takifugu_rubripes
ENSSSCG00000000870	ARL1	100	91.160	ENSTNIG00000006920	arl1	92	92.216	Tetraodon_nigroviridis
ENSSSCG00000000870	ARL1	100	98.352	ENSTBEG00000015546	ARL1	100	98.352	Tupaia_belangeri
ENSSSCG00000000870	ARL1	100	100.000	ENSTTRG00000017202	ARL1	95	100.000	Tursiops_truncatus
ENSSSCG00000000870	ARL1	100	100.000	ENSUMAG00000019547	ARL1	100	100.000	Ursus_maritimus
ENSSSCG00000000870	ARL1	100	100.000	ENSVPAG00000011621	ARL1	95	100.000	Vicugna_pacos
ENSSSCG00000000870	ARL1	100	100.000	ENSVVUG00000018044	ARL1	100	100.000	Vulpes_vulpes
ENSSSCG00000000870	ARL1	100	97.238	ENSXETG00000002540	arl1	100	97.238	Xenopus_tropicalis
ENSSSCG00000000870	ARL1	99	92.179	ENSXMAG00000028338	arl1	91	95.276	Xiphophorus_maculatus