EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000000920 (Gene tree)
Gene ID: 102161501
Gene Symbol: POC1B
Alias: FLJ14923|TUWD12|WDR51B
Full Name: POC1 centriolar protein B
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 90441 bases
Position: chr5:93132082-93222522
Accession: 102161501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000026688	eIF2A	PF08662.11	2e-09	1	1
ENSSSCP00000000982	eIF2A	PF08662.11	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000001004	POC1B-201	3027	XM_021092774	ENSSSCP00000000982	478 (aa)	XP_020948433	F1SPZ6
ENSSSCT00000029579	POC1B-202	2923	XM_021092776	ENSSSCP00000026688	451 (aa)	XP_020948435	I3LRF4

Gene Model

Click here to download ENSSSCG00000000920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000000920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000000920	POC1B	77	31.356	ENSSSCG00000006727	WDR3	58	31.356
ENSSSCG00000000920	POC1B	99	63.141	ENSSSCG00000011426	POC1A	100	54.444
ENSSSCG00000000920	POC1B	66	32.959	ENSSSCG00000024912	WDR5	90	32.061
ENSSSCG00000000920	POC1B	63	33.051	ENSSSCG00000024648	PRPF4	56	33.051
ENSSSCG00000000920	POC1B	63	31.217	ENSSSCG00000001757	WDR61	97	31.217

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000000920	POC1B	100	90.167	ENSG00000139323	POC1B	100	91.209	Homo_sapiens
ENSSSCG00000000920	POC1B	97	90.604	ENSAMEG00000001812	POC1B	100	90.828	Ailuropoda_melanoleuca
ENSSSCG00000000920	POC1B	100	90.244	ENSANAG00000023816	POC1B	100	90.244	Aotus_nancymaae
ENSSSCG00000000920	POC1B	99	94.420	ENSBTAG00000000687	POC1B	99	94.420	Bos_taurus
ENSSSCG00000000920	POC1B	100	89.749	ENSCJAG00000019637	POC1B	100	89.749	Callithrix_jacchus
ENSSSCG00000000920	POC1B	99	93.049	ENSCAFG00000006105	POC1B	99	93.049	Canis_familiaris
ENSSSCG00000000920	POC1B	97	92.661	ENSCAFG00020016403	POC1B	100	92.661	Canis_lupus_dingo
ENSSSCG00000000920	POC1B	99	94.316	ENSCHIG00000026402	POC1B	99	94.316	Capra_hircus
ENSSSCG00000000920	POC1B	85	83.990	ENSTSYG00000010732	POC1B	99	83.498	Carlito_syrichta
ENSSSCG00000000920	POC1B	97	72.477	ENSCAPG00000015652	POC1B	100	72.477	Cavia_aperea
ENSSSCG00000000920	POC1B	100	84.310	ENSCPOG00000015525	POC1B	100	84.310	Cavia_porcellus
ENSSSCG00000000920	POC1B	100	90.244	ENSCATG00000036201	POC1B	100	90.244	Cercocebus_atys
ENSSSCG00000000920	POC1B	97	87.770	ENSCLAG00000006831	POC1B	100	87.770	Chinchilla_lanigera
ENSSSCG00000000920	POC1B	100	90.466	ENSCSAG00000003775	POC1B	100	90.466	Chlorocebus_sabaeus
ENSSSCG00000000920	POC1B	99	65.227	ENSCPBG00000000137	POC1B	99	65.073	Chrysemys_picta_bellii
ENSSSCG00000000920	POC1B	100	90.022	ENSCANG00000043354	POC1B	100	90.022	Colobus_angolensis_palliatus
ENSSSCG00000000920	POC1B	97	90.991	ENSDNOG00000011916	POC1B	100	90.991	Dasypus_novemcinctus
ENSSSCG00000000920	POC1B	100	87.474	ENSDORG00000013903	Poc1b	100	87.474	Dipodomys_ordii
ENSSSCG00000000920	POC1B	100	92.469	ENSEASG00005019319	POC1B	100	92.469	Equus_asinus_asinus
ENSSSCG00000000920	POC1B	100	92.259	ENSECAG00000013326	POC1B	100	92.259	Equus_caballus
ENSSSCG00000000920	POC1B	100	92.018	ENSFCAG00000007623	POC1B	100	92.018	Felis_catus
ENSSSCG00000000920	POC1B	97	53.586	ENSFALG00000010636	POC1B	93	53.571	Ficedula_albicollis
ENSSSCG00000000920	POC1B	97	88.729	ENSFDAG00000020160	POC1B	100	88.729	Fukomys_damarensis
ENSSSCG00000000920	POC1B	78	70.739	ENSGAGG00000013124	POC1B	99	69.944	Gopherus_agassizii
ENSSSCG00000000920	POC1B	100	90.466	ENSGGOG00000008572	POC1B	100	90.466	Gorilla_gorilla
ENSSSCG00000000920	POC1B	100	87.805	ENSHGLG00000014556	POC1B	100	88.761	Heterocephalus_glaber_female
ENSSSCG00000000920	POC1B	97	88.969	ENSHGLG00100000295	POC1B	100	88.969	Heterocephalus_glaber_male
ENSSSCG00000000920	POC1B	99	87.444	ENSSTOG00000006306	POC1B	100	87.444	Ictidomys_tridecemlineatus
ENSSSCG00000000920	POC1B	100	85.809	ENSJJAG00000013503	Poc1b	100	85.809	Jaculus_jaculus
ENSSSCG00000000920	POC1B	98	60.042	ENSLOCG00000016379	POC1B	96	60.042	Lepisosteus_oculatus
ENSSSCG00000000920	POC1B	99	90.698	ENSLAFG00000017550	POC1B	100	90.698	Loxodonta_africana
ENSSSCG00000000920	POC1B	100	90.466	ENSMFAG00000043490	POC1B	100	90.466	Macaca_fascicularis
ENSSSCG00000000920	POC1B	100	90.466	ENSMNEG00000040128	POC1B	100	90.466	Macaca_nemestrina
ENSSSCG00000000920	POC1B	100	90.466	ENSMLEG00000031700	POC1B	100	90.466	Mandrillus_leucophaeus
ENSSSCG00000000920	POC1B	100	83.370	ENSMOCG00000015822	Poc1b	100	83.370	Microtus_ochrogaster
ENSSSCG00000000920	POC1B	99	72.047	ENSMODG00000009882	POC1B	99	71.992	Monodelphis_domestica
ENSSSCG00000000920	POC1B	100	80.488	MGP_PahariEiJ_G0031323	Poc1b	100	80.505	Mus_pahari
ENSSSCG00000000920	POC1B	100	91.023	ENSMPUG00000007581	POC1B	100	91.232	Mustela_putorius_furo
ENSSSCG00000000920	POC1B	97	89.842	ENSMLUG00000002893	POC1B	99	89.842	Myotis_lucifugus
ENSSSCG00000000920	POC1B	100	84.937	ENSNGAG00000019321	Poc1b	100	84.937	Nannospalax_galili
ENSSSCG00000000920	POC1B	100	90.022	ENSNLEG00000034847	POC1B	100	90.022	Nomascus_leucogenys
ENSSSCG00000000920	POC1B	98	87.447	ENSODEG00000009236	POC1B	99	87.447	Octodon_degus
ENSSSCG00000000920	POC1B	97	67.963	ENSOANG00000006637	POC1B	99	67.963	Ornithorhynchus_anatinus
ENSSSCG00000000920	POC1B	100	90.377	ENSOCUG00000008219	POC1B	100	90.377	Oryctolagus_cuniculus
ENSSSCG00000000920	POC1B	99	94.316	ENSOARG00000015648	POC1B	99	94.316	Ovis_aries
ENSSSCG00000000920	POC1B	100	90.687	ENSPPAG00000030897	POC1B	100	90.687	Pan_paniscus
ENSSSCG00000000920	POC1B	100	91.841	ENSPPRG00000006168	POC1B	100	91.841	Panthera_pardus
ENSSSCG00000000920	POC1B	97	91.284	ENSPTIG00000019536	POC1B	100	91.284	Panthera_tigris_altaica
ENSSSCG00000000920	POC1B	100	90.687	ENSPTRG00000005284	POC1B	100	90.687	Pan_troglodytes
ENSSSCG00000000920	POC1B	100	90.167	ENSPANG00000015875	POC1B	100	90.167	Papio_anubis
ENSSSCG00000000920	POC1B	97	64.912	ENSPSIG00000004298	POC1B	97	65.032	Pelodiscus_sinensis
ENSSSCG00000000920	POC1B	69	75.385	ENSPCIG00000014731	-	97	75.385	Phascolarctos_cinereus
ENSSSCG00000000920	POC1B	100	90.586	ENSPPYG00000004819	POC1B	100	90.586	Pongo_abelii
ENSSSCG00000000920	POC1B	100	69.038	ENSPCAG00000002158	POC1B	100	69.038	Procavia_capensis
ENSSSCG00000000920	POC1B	100	92.259	ENSPVAG00000011562	POC1B	100	92.259	Pteropus_vampyrus
ENSSSCG00000000920	POC1B	99	56.432	ENSPNAG00000026557	POC1B	97	55.258	Pygocentrus_nattereri
ENSSSCG00000000920	POC1B	100	88.470	ENSRBIG00000001080	POC1B	100	88.470	Rhinopithecus_bieti
ENSSSCG00000000920	POC1B	100	90.022	ENSRROG00000044376	POC1B	100	90.022	Rhinopithecus_roxellana
ENSSSCG00000000920	POC1B	100	90.909	ENSSBOG00000023395	POC1B	100	90.909	Saimiri_boliviensis_boliviensis
ENSSSCG00000000920	POC1B	100	78.452	ENSSARG00000010807	POC1B	100	78.452	Sorex_araneus
ENSSSCG00000000920	POC1B	98	55.748	ENSTGUG00000008063	POC1B	99	55.748	Taeniopygia_guttata
ENSSSCG00000000920	POC1B	95	85.714	ENSTBEG00000014216	POC1B	100	85.714	Tupaia_belangeri
ENSSSCG00000000920	POC1B	100	93.933	ENSTTRG00000002513	POC1B	100	93.933	Tursiops_truncatus
ENSSSCG00000000920	POC1B	100	91.858	ENSUAMG00000006889	POC1B	100	92.067	Ursus_americanus
ENSSSCG00000000920	POC1B	97	91.762	ENSUMAG00000002434	POC1B	100	92.439	Ursus_maritimus
ENSSSCG00000000920	POC1B	83	90.323	ENSVPAG00000001441	POC1B	84	90.323	Vicugna_pacos
ENSSSCG00000000920	POC1B	71	94.330	ENSVVUG00000011627	-	96	94.330	Vulpes_vulpes
ENSSSCG00000000920	POC1B	98	59.197	ENSXETG00000021865	poc1b	96	65.110	Xenopus_tropicalis