EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSSCG00000001065 (Gene tree)
Gene ID
100623695
Gene Symbol
ATXN1
Alias
ATX1|D6S504E|SCA1
Full Name
ataxin 1
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Minus strand
Length
417958 bases
Position
chr7:12304036-12721993
Accession
100623695
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000001136AXHPF08517.125.5e-4411
ENSSSCP00000051796AXHPF08517.125.5e-4411
ENSSSCP00000057609AXHPF08517.125.5e-4411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000051224ATXN1-2014065XM_013977443ENSSSCP00000057609821 (aa)XP_013832897F1RUJ3
ENSSSCT00000001160ATXN1-2032817XM_021099772ENSSSCP00000001136821 (aa)XP_020955431F1RUJ3
ENSSSCT00000042223ATXN1-2022885XM_021099777ENSSSCP00000051796821 (aa)XP_020955436F1RUJ3
Gene Model
Click here to download ENSSSCG00000001065's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000001065's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000001065ATXN110084.286ENSG00000124788ATXN110084.405Homo_sapiens
ENSSSCG00000001065ATXN19938.631ENSAPOG00000005003atxn1b9938.564Acanthochromis_polyacanthus
ENSSSCG00000001065ATXN110043.179ENSAPOG00000018662atxn1a10044.233Acanthochromis_polyacanthus
ENSSSCG00000001065ATXN110088.078ENSAMEG00000004299ATXN110087.591Ailuropoda_melanoleuca
ENSSSCG00000001065ATXN19938.790ENSACIG00000014661atxn1b9838.580Amphilophus_citrinellus
ENSSSCG00000001065ATXN110041.076ENSACIG00000016088atxn1a10040.732Amphilophus_citrinellus
ENSSSCG00000001065ATXN19939.068ENSAOCG00000019715atxn1b9939.203Amphiprion_ocellaris
ENSSSCG00000001065ATXN110043.243ENSAOCG00000015796atxn1a10044.382Amphiprion_ocellaris
ENSSSCG00000001065ATXN19939.068ENSAPEG00000022436atxn1b9939.313Amphiprion_percula
ENSSSCG00000001065ATXN110043.131ENSAPEG00000011313atxn1a10044.270Amphiprion_percula
ENSSSCG00000001065ATXN19939.078ENSATEG00000002982atxn1b9938.809Anabas_testudineus
ENSSSCG00000001065ATXN110043.715ENSATEG00000013601atxn1a10044.091Anabas_testudineus
ENSSSCG00000001065ATXN110072.121ENSACAG00000003919ATXN110072.121Anolis_carolinensis
ENSSSCG00000001065ATXN19986.829ENSANAG00000025206-9586.707Aotus_nancymaae
ENSSSCG00000001065ATXN18181.940ENSANAG00000025424-9681.791Aotus_nancymaae
ENSSSCG00000001065ATXN110043.834ENSACLG00000015429atxn1a10043.318Astatotilapia_calliptera
ENSSSCG00000001065ATXN19937.555ENSACLG00000005697atxn1b9937.991Astatotilapia_calliptera
ENSSSCG00000001065ATXN110044.483ENSAMXG00000042368atxn1a10045.517Astyanax_mexicanus
ENSSSCG00000001065ATXN19935.745ENSAMXG00000017432atxn1b8956.299Astyanax_mexicanus
ENSSSCG00000001065ATXN15242.537ENSBTAG00000046255ATXN1L5744.033Bos_taurus
ENSSSCG00000001065ATXN110088.809ENSBTAG00000019675ATXN110089.651Bos_taurus
ENSSSCG00000001065ATXN19986.707ENSCJAG00000006563ATXN19486.585Callithrix_jacchus
ENSSSCG00000001065ATXN110089.781ENSCAFG00000009934ATXN110089.659Canis_familiaris
ENSSSCG00000001065ATXN19989.756ENSCAFG00020012647ATXN19589.634Canis_lupus_dingo
ENSSSCG00000001065ATXN110089.843ENSCHIG00000018697ATXN110090.689Capra_hircus
ENSSSCG00000001065ATXN15242.491ENSCHIG00000011785ATXN1L5743.952Capra_hircus
ENSSSCG00000001065ATXN16494.631ENSTSYG00000000858ATXN19894.631Carlito_syrichta
ENSSSCG00000001065ATXN110082.530ENSCAPG00000013095ATXN110082.530Cavia_aperea
ENSSSCG00000001065ATXN110083.455ENSCPOG00000022869ATXN110083.455Cavia_porcellus
ENSSSCG00000001065ATXN110086.861ENSCCAG00000018590ATXN110086.740Cebus_capucinus
ENSSSCG00000001065ATXN15743.902ENSCCAG00000019464ATXN1L5743.621Cebus_capucinus
ENSSSCG00000001065ATXN110085.697ENSCATG00000042777ATXN110085.818Cercocebus_atys
ENSSSCG00000001065ATXN110085.384ENSCLAG00000002212ATXN110085.384Chinchilla_lanigera
ENSSSCG00000001065ATXN110085.905ENSCSAG00000007589ATXN110086.027Chlorocebus_sabaeus
ENSSSCG00000001065ATXN110077.697ENSCPBG00000022373ATXN110077.333Chrysemys_picta_bellii
ENSSSCG00000001065ATXN110085.993ENSCANG00000033673ATXN110085.993Colobus_angolensis_palliatus
ENSSSCG00000001065ATXN110084.198ENSCGRG00001022108Atxn110084.198Cricetulus_griseus_chok1gshd
ENSSSCG00000001065ATXN110085.018ENSCGRG00000014084Atxn110085.018Cricetulus_griseus_crigri
ENSSSCG00000001065ATXN19939.223ENSCSEG00000004666atxn1b9938.915Cynoglossus_semilaevis
ENSSSCG00000001065ATXN110041.685ENSCSEG00000017647atxn1a10042.247Cynoglossus_semilaevis
ENSSSCG00000001065ATXN19936.802ENSCVAG00000010945atxn1b9936.053Cyprinodon_variegatus
ENSSSCG00000001065ATXN110041.657ENSCVAG00000023240atxn1a10041.430Cyprinodon_variegatus
ENSSSCG00000001065ATXN110044.457ENSDARG00000061687atxn1a10046.260Danio_rerio
ENSSSCG00000001065ATXN19935.509ENSDARG00000060862atxn1b9935.526Danio_rerio
ENSSSCG00000001065ATXN18885.812ENSDNOG00000048471ATXN19785.584Dasypus_novemcinctus
ENSSSCG00000001065ATXN110079.809ENSDORG00000005940Atxn110081.243Dipodomys_ordii
ENSSSCG00000001065ATXN18788.690ENSETEG00000003815ATXN18789.205Echinops_telfairi
ENSSSCG00000001065ATXN110091.961ENSEASG00005011799ATXN110091.839Equus_asinus_asinus
ENSSSCG00000001065ATXN110091.961ENSECAG00000009251ATXN110091.839Equus_caballus
ENSSSCG00000001065ATXN110087.363ENSEEUG00000007120ATXN110087.363Erinaceus_europaeus
ENSSSCG00000001065ATXN19940.899ENSELUG00000003691atxn1a7245.107Esox_lucius
ENSSSCG00000001065ATXN19448.101ENSELUG00000001311atxn1b7448.101Esox_lucius
ENSSSCG00000001065ATXN110087.942ENSFCAG00000011298ATXN110087.942Felis_catus
ENSSSCG00000001065ATXN110079.056ENSFALG00000013400ATXN110078.935Ficedula_albicollis
ENSSSCG00000001065ATXN18793.095ENSFDAG00000020905ATXN110087.674Fukomys_damarensis
ENSSSCG00000001065ATXN19938.132ENSFHEG00000017226atxn1b9937.348Fundulus_heteroclitus
ENSSSCG00000001065ATXN110042.404ENSFHEG00000019419atxn1a10041.375Fundulus_heteroclitus
ENSSSCG00000001065ATXN19936.395ENSGMOG00000013508atxn1b9935.673Gadus_morhua
ENSSSCG00000001065ATXN110078.788ENSGALG00000012709ATXN110078.667Gallus_gallus
ENSSSCG00000001065ATXN19248.622ENSGAFG00000007295atxn1b9938.713Gambusia_affinis
ENSSSCG00000001065ATXN110040.604ENSGAFG00000010544atxn1a10040.828Gambusia_affinis
ENSSSCG00000001065ATXN19938.687ENSGACG00000008747atxn1b9938.668Gasterosteus_aculeatus
ENSSSCG00000001065ATXN110041.676ENSGACG00000003472atxn1a9246.266Gasterosteus_aculeatus
ENSSSCG00000001065ATXN110077.212ENSGAGG00000006868ATXN110076.848Gopherus_agassizii
ENSSSCG00000001065ATXN110084.976ENSGGOG00000004169ATXN110085.096Gorilla_gorilla
ENSSSCG00000001065ATXN110043.946ENSHBUG00000002508atxn1a10043.430Haplochromis_burtoni
ENSSSCG00000001065ATXN19937.555ENSHBUG00000016081atxn1b9937.991Haplochromis_burtoni
ENSSSCG00000001065ATXN110083.557ENSHGLG00000009360ATXN110083.557Heterocephalus_glaber_female
ENSSSCG00000001065ATXN110083.435ENSHGLG00100003038ATXN110083.435Heterocephalus_glaber_male
ENSSSCG00000001065ATXN110038.353ENSHCOG00000014835atxn1b9939.461Hippocampus_comes
ENSSSCG00000001065ATXN18646.026ENSHCOG00000019032atxn1a9444.610Hippocampus_comes
ENSSSCG00000001065ATXN110044.023ENSIPUG00000001402atxn110043.578Ictalurus_punctatus
ENSSSCG00000001065ATXN19936.504ENSIPUG00000002088atxn1b9935.730Ictalurus_punctatus
ENSSSCG00000001065ATXN110087.348ENSSTOG00000025423ATXN110087.348Ictidomys_tridecemlineatus
ENSSSCG00000001065ATXN110083.678ENSJJAG00000000377Atxn110083.678Jaculus_jaculus
ENSSSCG00000001065ATXN19938.258ENSKMAG00000013507atxn1b9939.068Kryptolebias_marmoratus
ENSSSCG00000001065ATXN110041.928ENSKMAG00000007216atxn1a10041.834Kryptolebias_marmoratus
ENSSSCG00000001065ATXN110039.090ENSLBEG00000024264atxn1b9939.232Labrus_bergylta
ENSSSCG00000001065ATXN110044.570ENSLBEG00000024388atxn1a10045.465Labrus_bergylta
ENSSSCG00000001065ATXN110066.182ENSLACG00000005371ATXN110065.576Latimeria_chalumnae
ENSSSCG00000001065ATXN110051.098ENSLOCG00000002910atxn1a10051.160Lepisosteus_oculatus
ENSSSCG00000001065ATXN110084.775ENSLAFG00000015231ATXN110084.775Loxodonta_africana
ENSSSCG00000001065ATXN110085.490ENSMFAG00000032779ATXN110085.611Macaca_fascicularis
ENSSSCG00000001065ATXN110085.611ENSMMUG00000002940ATXN110085.732Macaca_mulatta
ENSSSCG00000001065ATXN110085.576ENSMNEG00000036667ATXN110085.697Macaca_nemestrina
ENSSSCG00000001065ATXN18588.436ENSMLEG00000040480ATXN110088.870Mandrillus_leucophaeus
ENSSSCG00000001065ATXN19937.077ENSMAMG00000011503atxn1b9936.638Mastacembelus_armatus
ENSSSCG00000001065ATXN110043.626ENSMAMG00000014004atxn1a10044.062Mastacembelus_armatus
ENSSSCG00000001065ATXN110043.834ENSMZEG00005003602atxn1a10043.318Maylandia_zebra
ENSSSCG00000001065ATXN19937.555ENSMZEG00005015064atxn1b9937.991Maylandia_zebra
ENSSSCG00000001065ATXN110076.727ENSMGAG00000003028ATXN110076.606Meleagris_gallopavo
ENSSSCG00000001065ATXN110084.653ENSMAUG00000011491Atxn110084.653Mesocricetus_auratus
ENSSSCG00000001065ATXN110085.645ENSMICG00000011875ATXN110085.645Microcebus_murinus
ENSSSCG00000001065ATXN110084.672ENSMOCG00000001527Atxn110084.063Microtus_ochrogaster
ENSSSCG00000001065ATXN19939.290ENSMMOG00000002884atxn1b9938.993Mola_mola
ENSSSCG00000001065ATXN110044.419ENSMMOG00000018593atxn1a10044.060Mola_mola
ENSSSCG00000001065ATXN110083.212ENSMODG00000010827ATXN110083.090Monodelphis_domestica
ENSSSCG00000001065ATXN18645.921ENSMALG00000005209atxn1a10044.657Monopterus_albus
ENSSSCG00000001065ATXN19940.714ENSMALG00000012137atxn1b9940.119Monopterus_albus
ENSSSCG00000001065ATXN110084.185MGP_CAROLIEiJ_G0018479Atxn110084.185Mus_caroli
ENSSSCG00000001065ATXN110084.185ENSMUSG00000046876Atxn110084.185Mus_musculus
ENSSSCG00000001065ATXN110084.166MGP_PahariEiJ_G0019546Atxn110084.166Mus_pahari
ENSSSCG00000001065ATXN110083.698MGP_SPRETEiJ_G0019357Atxn110083.698Mus_spretus
ENSSSCG00000001065ATXN110089.647ENSMPUG00000005398ATXN110089.525Mustela_putorius_furo
ENSSSCG00000001065ATXN110087.698ENSMLUG00000000896ATXN110087.698Myotis_lucifugus
ENSSSCG00000001065ATXN110085.018ENSNGAG00000020481Atxn110085.018Nannospalax_galili
ENSSSCG00000001065ATXN110043.659ENSNBRG00000013216atxn1a10043.144Neolamprologus_brichardi
ENSSSCG00000001065ATXN19939.477ENSNBRG00000014776atxn1b9839.953Neolamprologus_brichardi
ENSSSCG00000001065ATXN110085.939ENSNLEG00000001064ATXN110085.939Nomascus_leucogenys
ENSSSCG00000001065ATXN19977.805ENSMEUG00000014680ATXN19677.805Notamacropus_eugenii
ENSSSCG00000001065ATXN110079.879ENSOPRG00000004813ATXN110079.879Ochotona_princeps
ENSSSCG00000001065ATXN110083.112ENSODEG00000006297ATXN110083.112Octodon_degus
ENSSSCG00000001065ATXN19939.671ENSONIG00000003094atxn1b9940.376Oreochromis_niloticus
ENSSSCG00000001065ATXN15142.353ENSOANG00000008188ATXN1L5742.387Ornithorhynchus_anatinus
ENSSSCG00000001065ATXN19255.941ENSOANG00000011866ATXN19956.559Ornithorhynchus_anatinus
ENSSSCG00000001065ATXN110084.204ENSOCUG00000015360ATXN110084.204Oryctolagus_cuniculus
ENSSSCG00000001065ATXN15531.716ENSORLG00000028821atxn1l6031.903Oryzias_latipes
ENSSSCG00000001065ATXN110042.286ENSORLG00000013003atxn1a9941.943Oryzias_latipes
ENSSSCG00000001065ATXN19937.707ENSORLG00000008288atxn1b9938.258Oryzias_latipes
ENSSSCG00000001065ATXN15532.150ENSORLG00020009219atxn1l6032.336Oryzias_latipes_hni
ENSSSCG00000001065ATXN110042.286ENSORLG00020006722atxn1a9941.600Oryzias_latipes_hni
ENSSSCG00000001065ATXN19937.542ENSORLG00020013514atxn1b9937.901Oryzias_latipes_hni
ENSSSCG00000001065ATXN110042.400ENSORLG00015014668atxn1a9941.714Oryzias_latipes_hsok
ENSSSCG00000001065ATXN19937.901ENSORLG00015019876atxn1b9937.707Oryzias_latipes_hsok
ENSSSCG00000001065ATXN15532.150ENSORLG00015007497atxn1l6032.448Oryzias_latipes_hsok
ENSSSCG00000001065ATXN110042.548ENSOMEG00000012883atxn1a9842.431Oryzias_melastigma
ENSSSCG00000001065ATXN19938.521ENSOMEG00000003259atxn1b9938.300Oryzias_melastigma
ENSSSCG00000001065ATXN19986.585ENSOGAG00000028623ATXN110086.585Otolemur_garnettii
ENSSSCG00000001065ATXN19086.107ENSOARG00000012141ATXN19886.822Ovis_aries
ENSSSCG00000001065ATXN15242.491ENSOARG00000011135ATXN1L5743.952Ovis_aries
ENSSSCG00000001065ATXN110084.468ENSPPAG00000028993ATXN110084.588Pan_paniscus
ENSSSCG00000001065ATXN110087.211ENSPPRG00000004547ATXN110087.211Panthera_pardus
ENSSSCG00000001065ATXN110084.772ENSPTRG00000039250ATXN110084.772Pan_troglodytes
ENSSSCG00000001065ATXN19985.558ENSPANG00000024249ATXN19985.662Papio_anubis
ENSSSCG00000001065ATXN110045.125ENSPKIG00000018323atxn1b10044.800Paramormyrops_kingsleyae
ENSSSCG00000001065ATXN110046.108ENSPKIG00000003054atxn1a10045.519Paramormyrops_kingsleyae
ENSSSCG00000001065ATXN17972.197ENSPSIG00000007158ATXN19272.043Pelodiscus_sinensis
ENSSSCG00000001065ATXN17660.784ENSPMGG00000022926atxn1a8060.784Periophthalmus_magnuspinnatus
ENSSSCG00000001065ATXN19938.061ENSPMGG00000013610atxn1b9938.398Periophthalmus_magnuspinnatus
ENSSSCG00000001065ATXN110084.531ENSPEMG00000014930Atxn110084.531Peromyscus_maniculatus_bairdii
ENSSSCG00000001065ATXN110083.090ENSPCIG00000019413ATXN110082.968Phascolarctos_cinereus
ENSSSCG00000001065ATXN110040.157ENSPFOG00000014422atxn1a10040.828Poecilia_formosa
ENSSSCG00000001065ATXN19938.544ENSPLAG00000018703atxn1b9838.902Poecilia_latipinna
ENSSSCG00000001065ATXN110040.143ENSPLAG00000018978atxn1a10040.499Poecilia_latipinna
ENSSSCG00000001065ATXN19937.927ENSPMEG00000023723atxn1b9937.829Poecilia_mexicana
ENSSSCG00000001065ATXN110039.933ENSPMEG00000002647atxn1a10040.604Poecilia_mexicana
ENSSSCG00000001065ATXN19939.571ENSPREG00000020308atxn1b9839.809Poecilia_reticulata
ENSSSCG00000001065ATXN110040.492ENSPREG00000008333atxn1a10040.940Poecilia_reticulata
ENSSSCG00000001065ATXN110084.689ENSPPYG00000016254ATXN110084.689Pongo_abelii
ENSSSCG00000001065ATXN17990.086ENSPCAG00000008196ATXN17490.086Procavia_capensis
ENSSSCG00000001065ATXN110086.131ENSPCOG00000013612ATXN110086.131Propithecus_coquereli
ENSSSCG00000001065ATXN19982.805ENSPVAG00000016937ATXN19682.805Pteropus_vampyrus
ENSSSCG00000001065ATXN110043.834ENSPNYG00000011920atxn1a10043.318Pundamilia_nyererei
ENSSSCG00000001065ATXN19939.596ENSPNYG00000017095atxn1b9840.071Pundamilia_nyererei
ENSSSCG00000001065ATXN19936.283ENSPNAG00000001226atxn1b9935.185Pygocentrus_nattereri
ENSSSCG00000001065ATXN110045.809ENSPNAG00000010587atxn1a10046.383Pygocentrus_nattereri
ENSSSCG00000001065ATXN110084.896ENSRNOG00000016998Atxn110084.896Rattus_norvegicus
ENSSSCG00000001065ATXN110085.042ENSRBIG00000028213ATXN110085.163Rhinopithecus_bieti
ENSSSCG00000001065ATXN110085.558ENSRROG00000032751ATXN110085.680Rhinopithecus_roxellana
ENSSSCG00000001065ATXN18171.880ENSSBOG00000030307-9171.278Saimiri_boliviensis_boliviensis
ENSSSCG00000001065ATXN15743.902ENSSBOG00000018954ATXN1L5743.621Saimiri_boliviensis_boliviensis
ENSSSCG00000001065ATXN110086.496ENSSBOG00000017381-10086.375Saimiri_boliviensis_boliviensis
ENSSSCG00000001065ATXN110044.872ENSSFOG00015005189atxn110045.476Scleropages_formosus
ENSSSCG00000001065ATXN110044.444ENSSFOG00015000179atxn1b10045.714Scleropages_formosus
ENSSSCG00000001065ATXN19937.703ENSSMAG00000019621atxn1b9937.742Scophthalmus_maximus
ENSSSCG00000001065ATXN19942.808ENSSMAG00000007731atxn1a9442.792Scophthalmus_maximus
ENSSSCG00000001065ATXN110044.407ENSSDUG00000011376atxn1a10045.212Seriola_dumerili
ENSSSCG00000001065ATXN19937.199ENSSDUG00000006990atxn1b9937.841Seriola_dumerili
ENSSSCG00000001065ATXN19937.090ENSSLDG00000016306atxn1b9938.002Seriola_lalandi_dorsalis
ENSSSCG00000001065ATXN110044.295ENSSLDG00000013505atxn1a10045.100Seriola_lalandi_dorsalis
ENSSSCG00000001065ATXN110075.908ENSSPUG00000016650ATXN110076.150Sphenodon_punctatus
ENSSSCG00000001065ATXN110043.498ENSSPAG00000019849atxn1a10042.619Stegastes_partitus
ENSSSCG00000001065ATXN19939.694ENSSPAG00000003388atxn1b9940.629Stegastes_partitus
ENSSSCG00000001065ATXN110074.849ENSTGUG00000005986ATXN110074.849Taeniopygia_guttata
ENSSSCG00000001065ATXN19938.343ENSTRUG00000024789atxn1b9937.597Takifugu_rubripes
ENSSSCG00000001065ATXN110043.908ENSTNIG00000005089atxn1a10043.858Tetraodon_nigroviridis
ENSSSCG00000001065ATXN110039.443ENSTNIG00000018398atxn1b10038.934Tetraodon_nigroviridis
ENSSSCG00000001065ATXN110092.448ENSTTRG00000014678ATXN19692.448Tursiops_truncatus
ENSSSCG00000001065ATXN110087.242ENSUAMG00000004064ATXN110086.999Ursus_americanus
ENSSSCG00000001065ATXN15789.286ENSUMAG00000017635-9889.076Ursus_maritimus
ENSSSCG00000001065ATXN110089.659ENSVVUG00000003386ATXN110089.538Vulpes_vulpes
ENSSSCG00000001065ATXN110064.346ENSXETG00000014184atxn110063.866Xenopus_tropicalis
ENSSSCG00000001065ATXN110041.676ENSXCOG00000020061atxn1a10041.444Xiphophorus_couchianus
ENSSSCG00000001065ATXN19938.771ENSXCOG00000019714atxn1b9839.130Xiphophorus_couchianus
ENSSSCG00000001065ATXN19248.371ENSXMAG00000014270atxn1b9938.925Xiphophorus_maculatus
ENSSSCG00000001065ATXN110041.026ENSXMAG00000003615atxn1a10041.051Xiphophorus_maculatus

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