EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000001092 (Gene tree)
Gene ID: 100157860
Gene Symbol: TDP2
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 13627 bases
Position: chr7:19488920-19502546
Accession: 100157860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000001163	Exo_endo_phos	PF03372.23	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000051086	-	1985	-	ENSSSCP00000059380	305 (aa)	-	A0A287BRV8
ENSSSCT00000001188	-	2736	-	ENSSSCP00000001163	362 (aa)	-	F1RUE1

Gene Model

Click here to download ENSSSCG00000001092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000001092's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000001092	TDP2	94	87.683	ENSG00000111802	TDP2	100	86.188	Homo_sapiens
ENSSSCG00000001092	TDP2	73	51.880	ENSAPOG00000018379	-	91	51.880	Acanthochromis_polyacanthus
ENSSSCG00000001092	TDP2	77	88.489	ENSAMEG00000010230	TDP2	99	88.489	Ailuropoda_melanoleuca
ENSSSCG00000001092	TDP2	70	51.953	ENSAPEG00000004208	-	91	51.953	Amphiprion_percula
ENSSSCG00000001092	TDP2	77	46.503	ENSATEG00000010663	-	91	46.503	Anabas_testudineus
ENSSSCG00000001092	TDP2	93	67.463	ENSACAG00000002332	TDP2	92	67.160	Anolis_carolinensis
ENSSSCG00000001092	TDP2	95	85.714	ENSANAG00000020033	TDP2	94	85.924	Aotus_nancymaae
ENSSSCG00000001092	TDP2	77	47.143	ENSACLG00000016174	tdp2b	94	47.143	Astatotilapia_calliptera
ENSSSCG00000001092	TDP2	77	47.500	ENSACLG00000016132	tdp2b	94	47.500	Astatotilapia_calliptera
ENSSSCG00000001092	TDP2	74	53.333	ENSACLG00000016148	tdp2b	95	53.333	Astatotilapia_calliptera
ENSSSCG00000001092	TDP2	75	49.635	ENSAMXG00000036549	tdp2a	89	49.635	Astyanax_mexicanus
ENSSSCG00000001092	TDP2	95	53.316	ENSAMXG00000011775	tdp2b	95	53.994	Astyanax_mexicanus
ENSSSCG00000001092	TDP2	100	89.835	ENSBTAG00000000365	TDP2	100	89.835	Bos_taurus
ENSSSCG00000001092	TDP2	90	31.915	WBGene00013405	tdpt-1	85	31.915	Caenorhabditis_elegans
ENSSSCG00000001092	TDP2	100	83.425	ENSCJAG00000006074	TDP2	100	83.425	Callithrix_jacchus
ENSSSCG00000001092	TDP2	100	82.320	ENSCJAG00000021963	-	100	82.320	Callithrix_jacchus
ENSSSCG00000001092	TDP2	96	84.393	ENSCAFG00000010428	TDP2	96	89.568	Canis_familiaris
ENSSSCG00000001092	TDP2	77	89.568	ENSCAFG00020009994	TDP2	96	89.568	Canis_lupus_dingo
ENSSSCG00000001092	TDP2	77	93.214	ENSCHIG00000015294	-	95	93.214	Capra_hircus
ENSSSCG00000001092	TDP2	85	87.379	ENSTSYG00000037199	TDP2	100	87.379	Carlito_syrichta
ENSSSCG00000001092	TDP2	94	87.647	ENSCPOG00000006390	TDP2	95	87.390	Cavia_porcellus
ENSSSCG00000001092	TDP2	100	84.807	ENSCCAG00000022734	TDP2	100	84.807	Cebus_capucinus
ENSSSCG00000001092	TDP2	94	87.977	ENSCATG00000022076	TDP2	91	89.568	Cercocebus_atys
ENSSSCG00000001092	TDP2	96	86.494	ENSCLAG00000002072	TDP2	95	87.390	Chinchilla_lanigera
ENSSSCG00000001092	TDP2	96	87.644	ENSCSAG00000007769	TDP2	95	87.977	Chlorocebus_sabaeus
ENSSSCG00000001092	TDP2	95	69.096	ENSCPBG00000006551	TDP2	87	69.208	Chrysemys_picta_bellii
ENSSSCG00000001092	TDP2	94	87.683	ENSCANG00000040122	TDP2	95	87.683	Colobus_angolensis_palliatus
ENSSSCG00000001092	TDP2	94	69.208	ENSCGRG00001000384	Tdp2	92	69.208	Cricetulus_griseus_chok1gshd
ENSSSCG00000001092	TDP2	94	67.251	ENSCGRG00000010250	Tdp2	94	67.930	Cricetulus_griseus_crigri
ENSSSCG00000001092	TDP2	93	53.143	ENSCVAG00000003114	tdp2b	95	53.143	Cyprinodon_variegatus
ENSSSCG00000001092	TDP2	68	49.796	ENSDARG00000069941	tdp2a	55	49.796	Danio_rerio
ENSSSCG00000001092	TDP2	93	51.499	ENSDARG00000035954	tdp2b	95	51.499	Danio_rerio
ENSSSCG00000001092	TDP2	100	82.320	ENSDNOG00000044082	TDP2	93	85.044	Dasypus_novemcinctus
ENSSSCG00000001092	TDP2	77	85.612	ENSETEG00000019096	TDP2	100	85.612	Echinops_telfairi
ENSSSCG00000001092	TDP2	73	52.985	ENSEBUG00000006535	tdp2a	62	52.985	Eptatretus_burgeri
ENSSSCG00000001092	TDP2	100	90.055	ENSEASG00005007656	TDP2	100	90.055	Equus_asinus_asinus
ENSSSCG00000001092	TDP2	100	89.503	ENSECAG00000014264	TDP2	100	89.503	Equus_caballus
ENSSSCG00000001092	TDP2	100	83.149	ENSEEUG00000010776	TDP2	100	83.149	Erinaceus_europaeus
ENSSSCG00000001092	TDP2	75	47.985	ENSELUG00000009321	tdp2a	85	47.985	Esox_lucius
ENSSSCG00000001092	TDP2	92	53.591	ENSELUG00000016449	tdp2b	95	53.591	Esox_lucius
ENSSSCG00000001092	TDP2	100	87.017	ENSFCAG00000025612	TDP2	100	87.017	Felis_catus
ENSSSCG00000001092	TDP2	94	60.411	ENSFALG00000004710	TDP2	94	60.526	Ficedula_albicollis
ENSSSCG00000001092	TDP2	77	88.571	ENSFDAG00000006512	TDP2	97	88.571	Fukomys_damarensis
ENSSSCG00000001092	TDP2	68	50.403	ENSFHEG00000013560	-	84	50.403	Fundulus_heteroclitus
ENSSSCG00000001092	TDP2	94	64.620	ENSGALG00000013637	TDP2	92	64.620	Gallus_gallus
ENSSSCG00000001092	TDP2	97	68.376	ENSGAGG00000002853	TDP2	87	69.208	Gopherus_agassizii
ENSSSCG00000001092	TDP2	94	87.390	ENSGGOG00000014237	TDP2	100	85.912	Gorilla_gorilla
ENSSSCG00000001092	TDP2	56	58.128	ENSHBUG00000005421	-	84	58.128	Haplochromis_burtoni
ENSSSCG00000001092	TDP2	93	53.561	ENSHBUG00000002714	tdp2b	95	53.561	Haplochromis_burtoni
ENSSSCG00000001092	TDP2	100	83.978	ENSHGLG00000008655	TDP2	95	85.924	Heterocephalus_glaber_female
ENSSSCG00000001092	TDP2	100	83.978	ENSHGLG00100019087	TDP2	95	85.924	Heterocephalus_glaber_male
ENSSSCG00000001092	TDP2	94	53.005	ENSIPUG00000013691	tdp2b	94	53.352	Ictalurus_punctatus
ENSSSCG00000001092	TDP2	97	65.143	ENSJJAG00000021685	Tdp2	97	66.864	Jaculus_jaculus
ENSSSCG00000001092	TDP2	76	48.375	ENSKMAG00000015485	-	88	48.375	Kryptolebias_marmoratus
ENSSSCG00000001092	TDP2	94	60.172	ENSLACG00000008852	TDP2	95	60.172	Latimeria_chalumnae
ENSSSCG00000001092	TDP2	77	59.206	ENSLOCG00000005817	tdp2b	99	59.206	Lepisosteus_oculatus
ENSSSCG00000001092	TDP2	94	86.217	ENSLAFG00000002567	TDP2	97	86.217	Loxodonta_africana
ENSSSCG00000001092	TDP2	94	88.270	ENSMFAG00000045296	TDP2	95	88.270	Macaca_fascicularis
ENSSSCG00000001092	TDP2	94	88.270	ENSMMUG00000009803	TDP2	95	88.270	Macaca_mulatta
ENSSSCG00000001092	TDP2	94	88.270	ENSMNEG00000038003	TDP2	95	88.270	Macaca_nemestrina
ENSSSCG00000001092	TDP2	94	87.683	ENSMLEG00000028883	TDP2	95	87.683	Mandrillus_leucophaeus
ENSSSCG00000001092	TDP2	92	54.706	ENSMAMG00000013654	tdp2b	94	54.386	Mastacembelus_armatus
ENSSSCG00000001092	TDP2	80	46.207	ENSMZEG00005004126	tdp2b	99	46.713	Maylandia_zebra
ENSSSCG00000001092	TDP2	71	54.826	ENSMZEG00005004077	tdp2b	87	54.826	Maylandia_zebra
ENSSSCG00000001092	TDP2	93	52.991	ENSMZEG00005003950	tdp2b	95	52.991	Maylandia_zebra
ENSSSCG00000001092	TDP2	71	47.308	ENSMZEG00005004103	tdp2b	87	47.308	Maylandia_zebra
ENSSSCG00000001092	TDP2	71	53.462	ENSMZEG00005004153	tdp2b	91	53.462	Maylandia_zebra
ENSSSCG00000001092	TDP2	69	46.429	ENSMZEG00005003980	-	82	46.429	Maylandia_zebra
ENSSSCG00000001092	TDP2	71	50.965	ENSMZEG00005004055	tdp2b	85	50.195	Maylandia_zebra
ENSSSCG00000001092	TDP2	94	65.396	ENSMGAG00000008014	TDP2	91	65.396	Meleagris_gallopavo
ENSSSCG00000001092	TDP2	94	68.915	ENSMAUG00000014451	Tdp2	92	68.915	Mesocricetus_auratus
ENSSSCG00000001092	TDP2	100	86.777	ENSMICG00000000039	TDP2	95	89.643	Microcebus_murinus
ENSSSCG00000001092	TDP2	94	70.088	ENSMOCG00000002823	Tdp2	92	70.088	Microtus_ochrogaster
ENSSSCG00000001092	TDP2	85	69.108	ENSMODG00000011653	TDP2	95	69.453	Monodelphis_domestica
ENSSSCG00000001092	TDP2	78	47.535	ENSMALG00000005368	-	92	47.535	Monopterus_albus
ENSSSCG00000001092	TDP2	95	67.733	MGP_CAROLIEiJ_G0018354	Tdp2	91	68.035	Mus_caroli
ENSSSCG00000001092	TDP2	94	68.622	ENSMUSG00000035958	Tdp2	91	68.622	Mus_musculus
ENSSSCG00000001092	TDP2	96	67.147	MGP_PahariEiJ_G0019417	Tdp2	91	67.742	Mus_pahari
ENSSSCG00000001092	TDP2	98	67.705	MGP_SPRETEiJ_G0019220	Tdp2	91	68.622	Mus_spretus
ENSSSCG00000001092	TDP2	94	86.006	ENSMPUG00000004516	TDP2	95	86.006	Mustela_putorius_furo
ENSSSCG00000001092	TDP2	97	78.187	ENSMLUG00000013506	TDP2	94	79.706	Myotis_lucifugus
ENSSSCG00000001092	TDP2	97	63.636	ENSNGAG00000001375	Tdp2	92	64.706	Nannospalax_galili
ENSSSCG00000001092	TDP2	100	85.083	ENSNLEG00000002447	TDP2	100	86.188	Nomascus_leucogenys
ENSSSCG00000001092	TDP2	97	84.571	ENSOPRG00000016299	TDP2	97	85.337	Ochotona_princeps
ENSSSCG00000001092	TDP2	77	88.929	ENSODEG00000014018	TDP2	95	88.929	Octodon_degus
ENSSSCG00000001092	TDP2	98	85.269	ENSOCUG00000013773	TDP2	94	86.217	Oryctolagus_cuniculus
ENSSSCG00000001092	TDP2	74	45.756	ENSORLG00000001661	-	98	45.756	Oryzias_latipes
ENSSSCG00000001092	TDP2	74	45.756	ENSORLG00020004634	-	98	45.756	Oryzias_latipes_hni
ENSSSCG00000001092	TDP2	71	42.692	ENSORLG00015008190	-	94	42.692	Oryzias_latipes_hsok
ENSSSCG00000001092	TDP2	77	47.122	ENSOMEG00000015899	-	92	49.597	Oryzias_melastigma
ENSSSCG00000001092	TDP2	100	83.149	ENSOGAG00000025303	TDP2	99	83.149	Otolemur_garnettii
ENSSSCG00000001092	TDP2	94	87.977	ENSPPAG00000029023	TDP2	100	86.464	Pan_paniscus
ENSSSCG00000001092	TDP2	100	87.017	ENSPPRG00000015398	TDP2	100	87.017	Panthera_pardus
ENSSSCG00000001092	TDP2	77	89.928	ENSPTIG00000018574	TDP2	95	89.928	Panthera_tigris_altaica
ENSSSCG00000001092	TDP2	94	87.977	ENSPTRG00000017778	TDP2	100	86.464	Pan_troglodytes
ENSSSCG00000001092	TDP2	94	87.390	ENSPANG00000017590	TDP2	95	87.390	Papio_anubis
ENSSSCG00000001092	TDP2	99	52.973	ENSPKIG00000006483	tdp2b	94	54.913	Paramormyrops_kingsleyae
ENSSSCG00000001092	TDP2	81	69.863	ENSPSIG00000004948	TDP2	100	69.863	Pelodiscus_sinensis
ENSSSCG00000001092	TDP2	94	69.795	ENSPEMG00000001788	Tdp2	91	69.795	Peromyscus_maniculatus_bairdii
ENSSSCG00000001092	TDP2	69	48.315	ENSPMAG00000001570	tdp2b	97	49.064	Petromyzon_marinus
ENSSSCG00000001092	TDP2	94	69.795	ENSPCIG00000007316	TDP2	89	69.795	Phascolarctos_cinereus
ENSSSCG00000001092	TDP2	78	45.645	ENSPFOG00000017990	-	95	45.645	Poecilia_formosa
ENSSSCG00000001092	TDP2	68	48.207	ENSPLAG00000019439	-	79	48.207	Poecilia_latipinna
ENSSSCG00000001092	TDP2	68	49.004	ENSPMEG00000010824	-	84	49.004	Poecilia_mexicana
ENSSSCG00000001092	TDP2	94	87.097	ENSPPYG00000016282	TDP2	92	85.635	Pongo_abelii
ENSSSCG00000001092	TDP2	100	86.740	ENSPCOG00000021415	TDP2	98	89.568	Propithecus_coquereli
ENSSSCG00000001092	TDP2	71	49.638	ENSPNYG00000011504	tdp2b	90	49.638	Pundamilia_nyererei
ENSSSCG00000001092	TDP2	93	52.137	ENSPNYG00000011532	tdp2b	95	52.137	Pundamilia_nyererei
ENSSSCG00000001092	TDP2	56	45.813	ENSPNYG00000001944	-	72	49.425	Pundamilia_nyererei
ENSSSCG00000001092	TDP2	70	51.984	ENSPNAG00000022162	tdp2a	62	53.061	Pygocentrus_nattereri
ENSSSCG00000001092	TDP2	94	67.251	ENSRNOG00000018246	Tdp2	92	67.449	Rattus_norvegicus
ENSSSCG00000001092	TDP2	94	87.390	ENSRBIG00000037119	TDP2	95	87.390	Rhinopithecus_bieti
ENSSSCG00000001092	TDP2	94	87.390	ENSRROG00000005025	TDP2	92	88.489	Rhinopithecus_roxellana
ENSSSCG00000001092	TDP2	100	84.807	ENSSBOG00000028734	TDP2	91	88.129	Saimiri_boliviensis_boliviensis
ENSSSCG00000001092	TDP2	97	69.014	ENSSHAG00000002506	TDP2	91	70.760	Sarcophilus_harrisii
ENSSSCG00000001092	TDP2	79	51.587	ENSSFOG00015011322	-	78	49.826	Scleropages_formosus
ENSSSCG00000001092	TDP2	77	79.570	ENSSARG00000013547	TDP2	100	79.570	Sorex_araneus
ENSSSCG00000001092	TDP2	94	66.286	ENSSPUG00000008288	TDP2	95	66.286	Sphenodon_punctatus
ENSSSCG00000001092	TDP2	71	69.531	ENSTGUG00000009035	TDP2	98	69.531	Taeniopygia_guttata
ENSSSCG00000001092	TDP2	93	52.422	ENSTRUG00000014347	tdp2b	96	52.125	Takifugu_rubripes
ENSSSCG00000001092	TDP2	72	50.000	ENSTRUG00000012218	-	94	50.000	Takifugu_rubripes
ENSSSCG00000001092	TDP2	70	51.953	ENSTNIG00000010260	TDP2	98	51.737	Tetraodon_nigroviridis
ENSSSCG00000001092	TDP2	96	51.240	ENSTNIG00000017792	tdp2b	96	51.831	Tetraodon_nigroviridis
ENSSSCG00000001092	TDP2	100	90.608	ENSTTRG00000016376	TDP2	100	90.608	Tursiops_truncatus
ENSSSCG00000001092	TDP2	97	81.766	ENSUAMG00000025939	TDP2	95	82.111	Ursus_americanus
ENSSSCG00000001092	TDP2	77	88.489	ENSUMAG00000020111	TDP2	93	88.489	Ursus_maritimus
ENSSSCG00000001092	TDP2	98	62.803	ENSXETG00000014826	tdp2	95	64.407	Xenopus_tropicalis
ENSSSCG00000001092	TDP2	68	49.402	ENSXCOG00000010778	-	69	49.402	Xiphophorus_couchianus
ENSSSCG00000001092	TDP2	68	49.402	ENSXMAG00000022252	-	72	49.402	Xiphophorus_maculatus