EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000001098 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 4420 bases
Position: chr7:19631180-19635599
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000049478	RRM_1	PF00076.22	3.7e-18	1	1
ENSSSCP00000054114	RRM_1	PF00076.22	4.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000001194	-	1047	-	ENSSSCP00000054114	348 (aa)	-	A0A287BCR1
ENSSSCT00000023365	-	1005	-	ENSSSCP00000049478	334 (aa)	-	A0A287B004

Gene Model

Click here to download ENSSSCG00000001098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000001098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000001098	-	51	73.096	ENSSSCG00000015988	HNRNPA3	63	70.954
ENSSSCG00000001098	-	50	56.044	ENSSSCG00000013607	-	62	51.852
ENSSSCG00000001098	-	73	60.886	ENSSSCG00000036878	-	69	58.635
ENSSSCG00000001098	-	81	47.604	ENSSSCG00000036350	HNRNPA2B1	72	52.609
ENSSSCG00000001098	-	92	39.489	ENSSSCG00000012503	-	71	43.723
ENSSSCG00000001098	-	88	36.593	ENSSSCG00000013611	-	51	40.351
ENSSSCG00000001098	-	93	50.148	ENSSSCG00000000288	HNRNPA1	66	62.617
ENSSSCG00000001098	-	68	30.488	ENSSSCG00000014031	-	69	35.981
ENSSSCG00000001098	-	50	37.566	ENSSSCG00000009249	HNRNPD	62	37.629
ENSSSCG00000001098	-	87	53.512	ENSSSCG00000033138	-	63	57.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000001098	-	60	51.293	ENSAPOG00000003641	hnrnpa3	79	55.189	Acanthochromis_polyacanthus
ENSSSCG00000001098	-	53	59.113	ENSAPOG00000003688	hnrnpa3	76	46.237	Acanthochromis_polyacanthus
ENSSSCG00000001098	-	60	51.293	ENSAPOG00000014678	-	71	48.163	Acanthochromis_polyacanthus
ENSSSCG00000001098	-	53	52.444	ENSAOCG00000004095	hnrnpa3	71	47.692	Amphiprion_ocellaris
ENSSSCG00000001098	-	53	52.444	ENSAPEG00000022522	hnrnpa3	71	48.077	Amphiprion_percula
ENSSSCG00000001098	-	53	59.113	ENSATEG00000015304	hnrnpa3	75	48.810	Anabas_testudineus
ENSSSCG00000001098	-	53	68.293	ENSACAG00000012234	-	58	68.304	Anolis_carolinensis
ENSSSCG00000001098	-	90	68.902	ENSANAG00000037918	-	92	71.920	Aotus_nancymaae
ENSSSCG00000001098	-	57	39.109	ENSACLG00000008973	HNRNPA0	56	44.172	Astatotilapia_calliptera
ENSSSCG00000001098	-	90	76.220	ENSCJAG00000013830	-	90	71.037	Callithrix_jacchus
ENSSSCG00000001098	-	90	70.427	ENSCAPG00000003643	-	86	70.427	Cavia_aperea
ENSSSCG00000001098	-	63	38.075	ENSCPOG00000026092	HNRNPA0	72	42.411	Cavia_porcellus
ENSSSCG00000001098	-	94	67.059	ENSCATG00000038569	-	90	64.545	Cercocebus_atys
ENSSSCG00000001098	-	95	58.382	ENSCLAG00000007120	-	62	53.509	Chinchilla_lanigera
ENSSSCG00000001098	-	58	40.991	ENSCSAG00000000499	HNRNPA0	65	40.826	Chlorocebus_sabaeus
ENSSSCG00000001098	-	87	60.726	ENSCSAG00000011517	-	86	59.355	Chlorocebus_sabaeus
ENSSSCG00000001098	-	75	38.989	ENSCING00000013663	-	51	45.833	Ciona_intestinalis
ENSSSCG00000001098	-	58	40.991	ENSCANG00000038062	HNRNPA0	64	40.826	Colobus_angolensis_palliatus
ENSSSCG00000001098	-	90	76.524	ENSCANG00000017881	-	58	69.863	Colobus_angolensis_palliatus
ENSSSCG00000001098	-	66	43.496	ENSCGRG00001005548	Hnrnpa0	66	44.608	Cricetulus_griseus_chok1gshd
ENSSSCG00000001098	-	54	63.265	ENSCGRG00001010070	-	67	62.312	Cricetulus_griseus_chok1gshd
ENSSSCG00000001098	-	62	70.561	ENSCGRG00001012459	-	88	69.259	Cricetulus_griseus_chok1gshd
ENSSSCG00000001098	-	54	63.265	ENSCGRG00000007592	-	66	62.312	Cricetulus_griseus_crigri
ENSSSCG00000001098	-	59	57.848	ENSDARG00000059351	hnrnpa3	88	59.813	Danio_rerio
ENSSSCG00000001098	-	52	71.859	ENSDNOG00000031964	-	74	69.328	Dasypus_novemcinctus
ENSSSCG00000001098	-	51	60.104	ENSETEG00000007747	-	74	58.685	Echinops_telfairi
ENSSSCG00000001098	-	59	49.107	ENSEBUG00000016570	HNRNPA0	64	49.554	Eptatretus_burgeri
ENSSSCG00000001098	-	50	44.865	ENSEBUG00000007989	-	50	50.000	Eptatretus_burgeri
ENSSSCG00000001098	-	61	42.174	ENSECAG00000032164	HNRNPA0	84	36.759	Equus_caballus
ENSSSCG00000001098	-	51	58.163	ENSELUG00000023080	hnrnpa3	73	55.349	Esox_lucius
ENSSSCG00000001098	-	54	67.179	ENSFDAG00000014067	-	58	68.649	Fukomys_damarensis
ENSSSCG00000001098	-	68	96.000	ENSFDAG00000009547	-	73	48.185	Fukomys_damarensis
ENSSSCG00000001098	-	91	60.843	ENSFDAG00000000331	-	54	59.716	Fukomys_damarensis
ENSSSCG00000001098	-	59	55.157	ENSGACG00000004477	hnrnpa3	69	58.571	Gasterosteus_aculeatus
ENSSSCG00000001098	-	63	41.004	ENSGAGG00000005632	HNRNPA0	91	37.500	Gopherus_agassizii
ENSSSCG00000001098	-	53	64.216	ENSHGLG00000014577	-	83	61.864	Heterocephalus_glaber_female
ENSSSCG00000001098	-	60	70.354	ENSHGLG00100006677	-	68	68.675	Heterocephalus_glaber_male
ENSSSCG00000001098	-	88	73.520	ENSHGLG00100001336	-	90	71.651	Heterocephalus_glaber_male
ENSSSCG00000001098	-	64	66.518	ENSSTOG00000019374	-	58	64.789	Ictidomys_tridecemlineatus
ENSSSCG00000001098	-	62	42.128	ENSJJAG00000006954	Hnrnpa0	73	39.076	Jaculus_jaculus
ENSSSCG00000001098	-	52	62.441	ENSLACG00000008189	hnrnpa3	63	62.832	Latimeria_chalumnae
ENSSSCG00000001098	-	93	37.202	ENSLACG00000014480	HNRNPA0	70	41.395	Latimeria_chalumnae
ENSSSCG00000001098	-	58	40.991	ENSMFAG00000030522	HNRNPA0	64	40.826	Macaca_fascicularis
ENSSSCG00000001098	-	88	66.766	ENSMMUG00000031232	-	90	64.157	Macaca_mulatta
ENSSSCG00000001098	-	58	40.991	ENSMNEG00000015863	HNRNPA0	64	40.826	Macaca_nemestrina
ENSSSCG00000001098	-	60	55.066	ENSMNEG00000038943	-	83	55.505	Macaca_nemestrina
ENSSSCG00000001098	-	58	40.991	ENSMLEG00000026629	HNRNPA0	64	40.826	Mandrillus_leucophaeus
ENSSSCG00000001098	-	57	39.109	ENSMZEG00005001055	HNRNPA0	56	44.172	Maylandia_zebra
ENSSSCG00000001098	-	90	62.500	ENSMODG00000024570	-	89	62.236	Monodelphis_domestica
ENSSSCG00000001098	-	84	67.568	ENSMALG00000009691	hnrnpa3	89	53.211	Monopterus_albus
ENSSSCG00000001098	-	100	82.857	ENSNGAG00000001008	-	64	60.088	Nannospalax_galili
ENSSSCG00000001098	-	64	40.496	ENSNGAG00000008883	Hnrnpa0	78	41.558	Nannospalax_galili
ENSSSCG00000001098	-	90	66.159	ENSNLEG00000027151	-	90	68.168	Nomascus_leucogenys
ENSSSCG00000001098	-	58	39.367	ENSODEG00000019566	HNRNPA0	74	41.558	Octodon_degus
ENSSSCG00000001098	-	53	59.606	ENSONIG00000008607	hnrnpa3	68	46.350	Oreochromis_niloticus
ENSSSCG00000001098	-	91	36.858	ENSORLG00020007505	-	58	39.429	Oryzias_latipes_hni
ENSSSCG00000001098	-	91	34.848	ENSORLG00015016169	HNRNPA0	58	38.857	Oryzias_latipes_hsok
ENSSSCG00000001098	-	51	58.883	ENSORLG00015014774	hnrnpa3	63	60.369	Oryzias_latipes_hsok
ENSSSCG00000001098	-	57	37.443	ENSORLG00015016302	HNRNPA0	68	42.180	Oryzias_latipes_hsok
ENSSSCG00000001098	-	93	37.168	ENSORLG00015017144	-	60	39.344	Oryzias_latipes_hsok
ENSSSCG00000001098	-	60	37.445	ENSORLG00015015182	-	79	39.891	Oryzias_latipes_hsok
ENSSSCG00000001098	-	88	37.725	ENSORLG00015016507	-	57	40.000	Oryzias_latipes_hsok
ENSSSCG00000001098	-	59	40.000	ENSOGAG00000025754	HNRNPA0	79	41.667	Otolemur_garnettii
ENSSSCG00000001098	-	72	41.264	ENSOARG00000015434	HNRNPA0	80	38.235	Ovis_aries
ENSSSCG00000001098	-	58	39.367	ENSPPRG00000014655	HNRNPA0	64	39.819	Panthera_pardus
ENSSSCG00000001098	-	58	40.991	ENSPANG00000012900	HNRNPA0	64	40.826	Papio_anubis
ENSSSCG00000001098	-	57	43.111	ENSPKIG00000020270	HNRNPA0	78	45.495	Paramormyrops_kingsleyae
ENSSSCG00000001098	-	51	61.421	ENSPKIG00000022916	hnrnpa3	75	62.736	Paramormyrops_kingsleyae
ENSSSCG00000001098	-	51	57.143	ENSPMGG00000000747	hnrnpa3	92	42.544	Periophthalmus_magnuspinnatus
ENSSSCG00000001098	-	65	38.115	ENSPEMG00000020274	Hnrnpa0	78	42.512	Peromyscus_maniculatus_bairdii
ENSSSCG00000001098	-	63	50.424	ENSPMAG00000004449	-	98	48.696	Petromyzon_marinus
ENSSSCG00000001098	-	90	48.624	ENSPFOG00000014049	hnrnpa3	82	47.253	Poecilia_formosa
ENSSSCG00000001098	-	90	48.624	ENSPMEG00000006390	hnrnpa3	82	47.253	Poecilia_mexicana
ENSSSCG00000001098	-	51	57.653	ENSPREG00000005411	hnrnpa3	64	59.434	Poecilia_reticulata
ENSSSCG00000001098	-	51	59.777	ENSPNYG00000008424	hnrnpa3	84	54.245	Pundamilia_nyererei
ENSSSCG00000001098	-	66	40.650	ENSRBIG00000023673	HNRNPA0	74	41.631	Rhinopithecus_bieti
ENSSSCG00000001098	-	66	40.650	ENSRROG00000002558	HNRNPA0	74	41.631	Rhinopithecus_roxellana
ENSSSCG00000001098	-	51	60.101	ENSSFOG00015001814	hnrnpa3	64	58.475	Scleropages_formosus
ENSSSCG00000001098	-	52	57.214	ENSSMAG00000015218	hnrnpa3	57	57.078	Scophthalmus_maximus
ENSSSCG00000001098	-	90	47.720	ENSSDUG00000000381	hnrnpa3	71	55.263	Seriola_dumerili
ENSSSCG00000001098	-	53	58.621	ENSSPAG00000008969	hnrnpa3	89	52.336	Stegastes_partitus
ENSSSCG00000001098	-	77	38.284	ENSSPAG00000001272	-	56	40.553	Stegastes_partitus
ENSSSCG00000001098	-	87	37.386	ENSTRUG00000021494	-	79	35.745	Takifugu_rubripes
ENSSSCG00000001098	-	51	57.576	ENSTNIG00000016958	hnrnpa3	91	53.681	Tetraodon_nigroviridis
ENSSSCG00000001098	-	58	39.367	ENSTTRG00000000499	HNRNPA0	61	43.850	Tursiops_truncatus
ENSSSCG00000001098	-	53	66.829	ENSXETG00000001806	hnrnpa3	58	67.265	Xenopus_tropicalis
ENSSSCG00000001098	-	78	37.124	ENSXETG00000003833	hnrnpa0	63	43.137	Xenopus_tropicalis