EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000001204 (Gene tree)
Gene ID: 100156123
Gene Symbol: ZKSCAN4
Alias: FLJ32136|P1P373C6|ZNF307|ZNF427|ZSCAN36|p373c6.1
Full Name: zinc finger with KRAB and SCAN domains 4
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 8746 bases
Position: chr7:22093092-22101837
Accession: 100156123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000001273	zf-C2H2	PF00096.26	9.8e-44	1	7
ENSSSCP00000001273	zf-C2H2	PF00096.26	9.8e-44	2	7
ENSSSCP00000001273	zf-C2H2	PF00096.26	9.8e-44	3	7
ENSSSCP00000001273	zf-C2H2	PF00096.26	9.8e-44	4	7
ENSSSCP00000001273	zf-C2H2	PF00096.26	9.8e-44	5	7
ENSSSCP00000001273	zf-C2H2	PF00096.26	9.8e-44	6	7
ENSSSCP00000001273	zf-C2H2	PF00096.26	9.8e-44	7	7
ENSSSCP00000001273	zf-met	PF12874.7	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000001302	ZKSCAN4-201	2385	XM_021099807	ENSSSCP00000001273	546 (aa)	XP_020955466	F1S1S1

Gene Model

Click here to download ENSSSCG00000001204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000001204's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000001204	ZKSCAN4	99	70.588	ENSCGRG00001006591	Zkscan3	97	70.588	Cricetulus_griseus_chok1gshd
ENSSSCG00000001204	ZKSCAN4	99	70.588	ENSCGRG00000001582	Zkscan3	97	70.588	Cricetulus_griseus_crigri
ENSSSCG00000001204	ZKSCAN4	99	67.647	ENSJJAG00000004576	-	96	67.647	Jaculus_jaculus
ENSSSCG00000001204	ZKSCAN4	99	69.853	ENSMAUG00000009785	Zkscan3	97	69.853	Mesocricetus_auratus
ENSSSCG00000001204	ZKSCAN4	99	69.597	ENSMOCG00000017860	Zkscan3	97	69.597	Microtus_ochrogaster
ENSSSCG00000001204	ZKSCAN4	100	59.341	MGP_CAROLIEiJ_G0018274	Zkscan4	99	53.229	Mus_caroli
ENSSSCG00000001204	ZKSCAN4	100	59.669	ENSMUSG00000054931	Zkscan4	99	74.751	Mus_musculus
ENSSSCG00000001204	ZKSCAN4	99	68.934	ENSMUSG00000021327	Zkscan3	97	68.934	Mus_musculus
ENSSSCG00000001204	ZKSCAN4	100	50.273	MGP_PahariEiJ_G0019324	Zkscan4	99	57.770	Mus_pahari
ENSSSCG00000001204	ZKSCAN4	100	63.536	MGP_SPRETEiJ_G0019129	Zkscan4	99	57.615	Mus_spretus
ENSSSCG00000001204	ZKSCAN4	99	76.007	ENSPCAG00000000195	ZKSCAN4	99	76.007	Procavia_capensis
ENSSSCG00000001204	ZKSCAN4	74	76.543	ENSTTRG00000015632	-	100	76.543	Tursiops_truncatus