EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000001423 (Gene tree)
Gene ID: 100124384
Gene Symbol: NELFE
Alias: D6S45|NELF-E|RD|RDBP|RDP
Full Name: negative elongation factor complex member E
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 6616 bases
Position: chr7:24040368-24046983
Accession: 100124384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000001523	RRM_1	PF00076.22	4e-11	1	1
ENSSSCP00000030013	RRM_1	PF00076.22	4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000032936	NELFE-202	1959	-	ENSSSCP00000030013	378 (aa)	-	F1RQW5
ENSSSCT00000001565	NELFE-201	1677	-	ENSSSCP00000001523	378 (aa)	-	F1RQW5
ENSSSCT00000035393	NELFE-203	1749	XM_005665804	ENSSSCP00000031031	380 (aa)	XP_005665861	K7GSZ0

Gene Model

Click here to download ENSSSCG00000001423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000001423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000001423	NELFE	100	96.579	ENSG00000204356	NELFE	100	98.742	Homo_sapiens
ENSSSCG00000001423	NELFE	100	97.906	ENSAMEG00000002062	NELFE	98	97.906	Ailuropoda_melanoleuca
ENSSSCG00000001423	NELFE	100	97.105	ENSANAG00000038256	NELFE	100	97.105	Aotus_nancymaae
ENSSSCG00000001423	NELFE	100	97.090	ENSBTAG00000007453	NELFE	100	97.090	Bos_taurus
ENSSSCG00000001423	NELFE	100	97.632	ENSCJAG00000002368	-	98	97.632	Callithrix_jacchus
ENSSSCG00000001423	NELFE	100	97.884	ENSCAFG00020000938	NELFE	100	97.884	Canis_lupus_dingo
ENSSSCG00000001423	NELFE	100	95.767	ENSCHIG00000013713	NELFE	100	95.767	Capra_hircus
ENSSSCG00000001423	NELFE	100	96.306	ENSTSYG00000012132	-	98	96.306	Carlito_syrichta
ENSSSCG00000001423	NELFE	100	95.573	ENSCCAG00000014945	NELFE	100	95.573	Cebus_capucinus
ENSSSCG00000001423	NELFE	100	96.032	ENSCATG00000028969	NELFE	100	96.032	Cercocebus_atys
ENSSSCG00000001423	NELFE	100	94.709	ENSCLAG00000009684	NELFE	100	94.709	Chinchilla_lanigera
ENSSSCG00000001423	NELFE	100	94.588	ENSCANG00000022451	NELFE	98	94.588	Colobus_angolensis_palliatus
ENSSSCG00000001423	NELFE	100	96.335	ENSDNOG00000041886	-	100	96.335	Dasypus_novemcinctus
ENSSSCG00000001423	NELFE	98	46.631	ENSEBUG00000017070	nelfe	99	60.109	Eptatretus_burgeri
ENSSSCG00000001423	NELFE	72	98.889	ENSEEUG00000005004	NELFE	70	98.889	Erinaceus_europaeus
ENSSSCG00000001423	NELFE	97	57.180	ENSELUG00000005830	nelfe	71	75.258	Esox_lucius
ENSSSCG00000001423	NELFE	100	98.158	ENSFCAG00000004518	NELFE	100	98.158	Felis_catus
ENSSSCG00000001423	NELFE	98	63.612	ENSGALG00000045676	NELFE	97	77.165	Gallus_gallus
ENSSSCG00000001423	NELFE	98	65.508	ENSGAGG00000005411	NELFE	94	83.465	Gopherus_agassizii
ENSSSCG00000001423	NELFE	100	96.032	ENSGGOG00000002265	NELFE	100	96.032	Gorilla_gorilla
ENSSSCG00000001423	NELFE	72	85.662	ENSHGLG00000016601	NELFE	92	85.091	Heterocephalus_glaber_female
ENSSSCG00000001423	NELFE	100	96.561	ENSSTOG00000027409	NELFE	100	96.561	Ictidomys_tridecemlineatus
ENSSSCG00000001423	NELFE	100	96.579	ENSLAFG00000028155	NELFE	99	96.579	Loxodonta_africana
ENSSSCG00000001423	NELFE	100	96.842	ENSMFAG00000036108	-	100	96.842	Macaca_fascicularis
ENSSSCG00000001423	NELFE	100	96.842	ENSMMUG00000000735	-	100	96.842	Macaca_mulatta
ENSSSCG00000001423	NELFE	100	95.573	ENSMNEG00000032542	NELFE	100	96.032	Macaca_nemestrina
ENSSSCG00000001423	NELFE	100	96.296	ENSMLEG00000030245	NELFE	100	96.296	Mandrillus_leucophaeus
ENSSSCG00000001423	NELFE	70	72.727	ENSMGAG00000001297	NELFE	77	73.810	Meleagris_gallopavo
ENSSSCG00000001423	NELFE	82	95.930	ENSMODG00000015063	NELFE	96	95.954	Monodelphis_domestica
ENSSSCG00000001423	NELFE	98	93.767	MGP_PahariEiJ_G0020473	Nelfe	100	93.767	Mus_pahari
ENSSSCG00000001423	NELFE	100	96.335	ENSMPUG00000010581	NELFE	98	96.335	Mustela_putorius_furo
ENSSSCG00000001423	NELFE	100	94.974	ENSMLUG00000000622	-	98	94.974	Myotis_lucifugus
ENSSSCG00000001423	NELFE	98	88.618	ENSNGAG00000016248	Nelfe	50	97.159	Nannospalax_galili
ENSSSCG00000001423	NELFE	98	95.957	ENSODEG00000017670	NELFE	100	95.957	Octodon_degus
ENSSSCG00000001423	NELFE	51	98.438	ENSOCUG00000007012	NELFE	100	94.330	Oryctolagus_cuniculus
ENSSSCG00000001423	NELFE	100	96.842	ENSOGAG00000009574	NELFE	98	96.842	Otolemur_garnettii
ENSSSCG00000001423	NELFE	100	96.032	ENSOARG00000002616	NELFE	98	96.032	Ovis_aries
ENSSSCG00000001423	NELFE	100	95.812	ENSPPAG00000039942	NELFE	100	95.812	Pan_paniscus
ENSSSCG00000001423	NELFE	100	97.632	ENSPPRG00000004421	NELFE	100	97.632	Panthera_pardus
ENSSSCG00000001423	NELFE	100	97.632	ENSPTIG00000003753	NELFE	100	97.632	Panthera_tigris_altaica
ENSSSCG00000001423	NELFE	100	95.550	ENSPTRG00000017996	NELFE	100	95.550	Pan_troglodytes
ENSSSCG00000001423	NELFE	100	96.296	ENSPANG00000019366	NELFE	100	96.296	Papio_anubis
ENSSSCG00000001423	NELFE	97	69.837	ENSPKIG00000012048	nelfe	99	70.380	Paramormyrops_kingsleyae
ENSSSCG00000001423	NELFE	100	96.073	ENSPPYG00000016471	NELFE	100	96.073	Pongo_abelii
ENSSSCG00000001423	NELFE	68	94.922	ENSPCAG00000004108	NELFE	68	94.922	Procavia_capensis
ENSSSCG00000001423	NELFE	100	96.296	ENSPCOG00000024944	NELFE	100	96.296	Propithecus_coquereli
ENSSSCG00000001423	NELFE	100	96.825	ENSPVAG00000005135	NELFE	100	96.825	Pteropus_vampyrus
ENSSSCG00000001423	NELFE	98	92.683	ENSRNOG00000000420	Nelfe	100	92.683	Rattus_norvegicus
ENSSSCG00000001423	NELFE	100	86.508	ENSRBIG00000028593	-	100	93.590	Rhinopithecus_bieti
ENSSSCG00000001423	NELFE	100	95.026	ENSRROG00000041993	NELFE	100	93.590	Rhinopithecus_roxellana
ENSSSCG00000001423	NELFE	100	97.368	ENSSBOG00000035865	NELFE	98	97.368	Saimiri_boliviensis_boliviensis
ENSSSCG00000001423	NELFE	98	64.122	ENSSFOG00015017039	nelfe	99	69.293	Scleropages_formosus
ENSSSCG00000001423	NELFE	93	94.618	ENSSARG00000003684	NELFE	97	94.461	Sorex_araneus
ENSSSCG00000001423	NELFE	100	97.619	ENSTTRG00000005923	NELFE	100	97.619	Tursiops_truncatus
ENSSSCG00000001423	NELFE	100	97.644	ENSUAMG00000024338	NELFE	100	97.644	Ursus_americanus
ENSSSCG00000001423	NELFE	100	97.644	ENSUMAG00000012674	NELFE	100	97.644	Ursus_maritimus
ENSSSCG00000001423	NELFE	99	58.201	ENSXETG00000010931	nelfe	72	76.812	Xenopus_tropicalis
ENSSSCG00000001423	NELFE	97	62.228	ENSXCOG00000019513	nelfe	99	62.772	Xiphophorus_couchianus
ENSSSCG00000001423	NELFE	97	67.663	ENSXMAG00000014078	nelfe	99	68.207	Xiphophorus_maculatus