EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000001692 (Gene tree)
Gene ID: 100154748
Gene Symbol: MRPS18A
Alias: FLJ10548|MRPS18-3
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 16051 bases
Position: chr7:38641030-38657080
Accession: 100154748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000001842	Ribosomal_S18	PF01084.20	3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000001889	MRPS18A-201	1571	XM_005654195	ENSSSCP00000001842	196 (aa)	XP_005654252	F1RRH6

Gene Model

Click here to download ENSSSCG00000001692's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000001692's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000001692	MRPS18A	100	84.694	ENSG00000096080	MRPS18A	99	87.302	Homo_sapiens
ENSSSCG00000001692	MRPS18A	100	85.204	ENSAMEG00000012117	MRPS18A	100	85.204	Ailuropoda_melanoleuca
ENSSSCG00000001692	MRPS18A	84	68.072	ENSACIG00000017782	mrps18a	79	68.072	Amphilophus_citrinellus
ENSSSCG00000001692	MRPS18A	84	66.265	ENSAPEG00000006971	mrps18a	79	66.265	Amphiprion_percula
ENSSSCG00000001692	MRPS18A	84	69.091	ENSATEG00000003132	mrps18a	79	69.091	Anabas_testudineus
ENSSSCG00000001692	MRPS18A	81	71.698	ENSAPLG00000016280	MRPS18A	100	71.698	Anas_platyrhynchos
ENSSSCG00000001692	MRPS18A	100	65.816	ENSACAG00000000642	MRPS18A	100	65.816	Anolis_carolinensis
ENSSSCG00000001692	MRPS18A	100	81.633	ENSANAG00000030889	MRPS18A	99	84.127	Aotus_nancymaae
ENSSSCG00000001692	MRPS18A	84	68.485	ENSACLG00000008170	mrps18a	84	67.320	Astatotilapia_calliptera
ENSSSCG00000001692	MRPS18A	89	58.757	ENSAMXG00000036348	mrps18a	84	58.757	Astyanax_mexicanus
ENSSSCG00000001692	MRPS18A	58	66.957	ENSAMXG00000036055	-	85	66.957	Astyanax_mexicanus
ENSSSCG00000001692	MRPS18A	100	89.796	ENSBTAG00000025571	MRPS18A	100	89.796	Bos_taurus
ENSSSCG00000001692	MRPS18A	100	80.102	ENSCJAG00000017382	MRPS18A	99	81.746	Callithrix_jacchus
ENSSSCG00000001692	MRPS18A	100	86.735	ENSCAFG00000001928	MRPS18A	100	86.735	Canis_familiaris
ENSSSCG00000001692	MRPS18A	100	86.224	ENSCAFG00020012064	MRPS18A	83	86.224	Canis_lupus_dingo
ENSSSCG00000001692	MRPS18A	100	88.776	ENSCHIG00000013039	MRPS18A	100	88.776	Capra_hircus
ENSSSCG00000001692	MRPS18A	100	85.714	ENSTSYG00000001390	MRPS18A	100	85.714	Carlito_syrichta
ENSSSCG00000001692	MRPS18A	80	82.692	ENSCAPG00000016029	MRPS18A	96	82.692	Cavia_aperea
ENSSSCG00000001692	MRPS18A	100	81.633	ENSCPOG00000022949	MRPS18A	100	81.633	Cavia_porcellus
ENSSSCG00000001692	MRPS18A	100	80.102	ENSCCAG00000021108	MRPS18A	100	80.102	Cebus_capucinus
ENSSSCG00000001692	MRPS18A	100	83.163	ENSCATG00000012963	MRPS18A	99	84.921	Cercocebus_atys
ENSSSCG00000001692	MRPS18A	100	82.143	ENSCLAG00000012929	MRPS18A	100	82.143	Chinchilla_lanigera
ENSSSCG00000001692	MRPS18A	100	82.143	ENSCSAG00000012127	MRPS18A	100	82.143	Chlorocebus_sabaeus
ENSSSCG00000001692	MRPS18A	100	62.245	ENSCPBG00000025243	MRPS18A	100	62.245	Chrysemys_picta_bellii
ENSSSCG00000001692	MRPS18A	76	35.762	ENSCING00000024771	-	76	35.762	Ciona_intestinalis
ENSSSCG00000001692	MRPS18A	80	33.758	ENSCSAVG00000009539	-	88	33.758	Ciona_savignyi
ENSSSCG00000001692	MRPS18A	100	81.122	ENSCANG00000039873	MRPS18A	99	82.540	Colobus_angolensis_palliatus
ENSSSCG00000001692	MRPS18A	92	75.000	ENSCGRG00001017882	Mrps18a	97	75.000	Cricetulus_griseus_chok1gshd
ENSSSCG00000001692	MRPS18A	92	60.000	ENSCGRG00000000079	Mrps18a	100	56.376	Cricetulus_griseus_crigri
ENSSSCG00000001692	MRPS18A	84	64.458	ENSCSEG00000019650	mrps18a	79	65.663	Cynoglossus_semilaevis
ENSSSCG00000001692	MRPS18A	84	68.072	ENSCVAG00000006511	mrps18a	79	68.072	Cyprinodon_variegatus
ENSSSCG00000001692	MRPS18A	85	66.071	ENSDARG00000024465	mrps18a	80	67.262	Danio_rerio
ENSSSCG00000001692	MRPS18A	100	85.714	ENSDNOG00000035755	MRPS18A	99	85.714	Dasypus_novemcinctus
ENSSSCG00000001692	MRPS18A	100	83.673	ENSDORG00000014583	Mrps18a	100	83.673	Dipodomys_ordii
ENSSSCG00000001692	MRPS18A	67	34.586	FBgn0051450	mRpS18A	83	34.586	Drosophila_melanogaster
ENSSSCG00000001692	MRPS18A	76	71.351	ENSETEG00000014171	MRPS18A	100	71.351	Echinops_telfairi
ENSSSCG00000001692	MRPS18A	90	88.068	ENSEASG00005003485	MRPS18A	64	88.068	Equus_asinus_asinus
ENSSSCG00000001692	MRPS18A	90	86.364	ENSECAG00000004870	MRPS18A	64	86.364	Equus_caballus
ENSSSCG00000001692	MRPS18A	84	66.265	ENSELUG00000005253	mrps18a	79	66.265	Esox_lucius
ENSSSCG00000001692	MRPS18A	100	88.265	ENSFCAG00000036031	MRPS18A	100	88.265	Felis_catus
ENSSSCG00000001692	MRPS18A	100	63.776	ENSFALG00000011356	MRPS18A	100	63.776	Ficedula_albicollis
ENSSSCG00000001692	MRPS18A	87	80.702	ENSFDAG00000012875	MRPS18A	86	80.702	Fukomys_damarensis
ENSSSCG00000001692	MRPS18A	83	69.512	ENSFHEG00000009014	mrps18a	78	69.512	Fundulus_heteroclitus
ENSSSCG00000001692	MRPS18A	89	59.091	ENSGMOG00000012493	mrps18a	85	61.364	Gadus_morhua
ENSSSCG00000001692	MRPS18A	69	70.588	ENSGALG00000010296	MRPS18A	93	70.588	Gallus_gallus
ENSSSCG00000001692	MRPS18A	83	69.512	ENSGAFG00000005211	mrps18a	80	70.470	Gambusia_affinis
ENSSSCG00000001692	MRPS18A	84	61.446	ENSGACG00000013370	mrps18a	81	63.855	Gasterosteus_aculeatus
ENSSSCG00000001692	MRPS18A	76	69.595	ENSGAGG00000017954	MRPS18A	99	59.278	Gopherus_agassizii
ENSSSCG00000001692	MRPS18A	100	84.184	ENSGGOG00000006303	-	99	86.508	Gorilla_gorilla
ENSSSCG00000001692	MRPS18A	84	68.485	ENSHBUG00000014682	mrps18a	79	68.485	Haplochromis_burtoni
ENSSSCG00000001692	MRPS18A	100	79.082	ENSHGLG00000014356	MRPS18A	100	79.082	Heterocephalus_glaber_female
ENSSSCG00000001692	MRPS18A	100	79.082	ENSHGLG00100010988	MRPS18A	100	79.082	Heterocephalus_glaber_male
ENSSSCG00000001692	MRPS18A	84	68.902	ENSHCOG00000000856	mrps18a	79	68.902	Hippocampus_comes
ENSSSCG00000001692	MRPS18A	93	64.324	ENSIPUG00000017406	mrps18a	88	64.865	Ictalurus_punctatus
ENSSSCG00000001692	MRPS18A	100	78.155	ENSSTOG00000004490	MRPS18A	100	78.155	Ictidomys_tridecemlineatus
ENSSSCG00000001692	MRPS18A	100	81.633	ENSJJAG00000006567	Mrps18a	100	81.633	Jaculus_jaculus
ENSSSCG00000001692	MRPS18A	84	68.072	ENSKMAG00000014910	mrps18a	79	68.072	Kryptolebias_marmoratus
ENSSSCG00000001692	MRPS18A	84	66.265	ENSLBEG00000003391	mrps18a	79	66.265	Labrus_bergylta
ENSSSCG00000001692	MRPS18A	89	51.136	ENSLACG00000022160	mrps18a	82	51.136	Latimeria_chalumnae
ENSSSCG00000001692	MRPS18A	94	63.784	ENSLOCG00000016008	mrps18a	88	63.784	Lepisosteus_oculatus
ENSSSCG00000001692	MRPS18A	100	81.726	ENSLAFG00000001168	MRPS18A	100	81.726	Loxodonta_africana
ENSSSCG00000001692	MRPS18A	100	82.143	ENSMFAG00000038311	MRPS18A	99	83.333	Macaca_fascicularis
ENSSSCG00000001692	MRPS18A	100	82.143	ENSMMUG00000014749	MRPS18A	99	83.333	Macaca_mulatta
ENSSSCG00000001692	MRPS18A	100	82.143	ENSMNEG00000044642	MRPS18A	99	83.333	Macaca_nemestrina
ENSSSCG00000001692	MRPS18A	81	84.810	ENSMLEG00000041828	MRPS18A	100	84.810	Mandrillus_leucophaeus
ENSSSCG00000001692	MRPS18A	84	65.663	ENSMAMG00000015478	mrps18a	79	68.072	Mastacembelus_armatus
ENSSSCG00000001692	MRPS18A	84	68.485	ENSMZEG00005014925	mrps18a	84	67.320	Maylandia_zebra
ENSSSCG00000001692	MRPS18A	93	68.132	ENSMGAG00000010915	MRPS18A	95	68.132	Meleagris_gallopavo
ENSSSCG00000001692	MRPS18A	100	83.673	ENSMICG00000005062	MRPS18A	100	83.673	Microcebus_murinus
ENSSSCG00000001692	MRPS18A	93	75.410	ENSMOCG00000015168	-	97	75.410	Microtus_ochrogaster
ENSSSCG00000001692	MRPS18A	100	78.061	ENSMOCG00000021207	-	100	78.061	Microtus_ochrogaster
ENSSSCG00000001692	MRPS18A	84	67.470	ENSMMOG00000015248	mrps18a	80	67.470	Mola_mola
ENSSSCG00000001692	MRPS18A	53	60.194	ENSMMOG00000015315	mrps18a	71	60.194	Mola_mola
ENSSSCG00000001692	MRPS18A	100	66.527	ENSMODG00000018952	MRPS18A	100	66.527	Monodelphis_domestica
ENSSSCG00000001692	MRPS18A	99	57.949	ENSMALG00000017044	mrps18a	99	57.949	Monopterus_albus
ENSSSCG00000001692	MRPS18A	100	78.571	MGP_CAROLIEiJ_G0021656	Mrps18a	100	78.571	Mus_caroli
ENSSSCG00000001692	MRPS18A	100	78.061	ENSMUSG00000023967	Mrps18a	100	78.061	Mus_musculus
ENSSSCG00000001692	MRPS18A	100	78.061	MGP_PahariEiJ_G0020648	Mrps18a	100	78.061	Mus_pahari
ENSSSCG00000001692	MRPS18A	100	78.061	MGP_SPRETEiJ_G0022568	Mrps18a	100	78.061	Mus_spretus
ENSSSCG00000001692	MRPS18A	100	86.735	ENSMPUG00000012868	MRPS18A	83	86.735	Mustela_putorius_furo
ENSSSCG00000001692	MRPS18A	100	88.265	ENSMLUG00000017755	MRPS18A	100	88.265	Myotis_lucifugus
ENSSSCG00000001692	MRPS18A	100	81.122	ENSNGAG00000020052	Mrps18a	100	81.122	Nannospalax_galili
ENSSSCG00000001692	MRPS18A	84	68.485	ENSNBRG00000021152	mrps18a	79	68.485	Neolamprologus_brichardi
ENSSSCG00000001692	MRPS18A	100	83.673	ENSNLEG00000003865	MRPS18A	99	86.508	Nomascus_leucogenys
ENSSSCG00000001692	MRPS18A	100	63.052	ENSMEUG00000013986	MRPS18A	100	62.651	Notamacropus_eugenii
ENSSSCG00000001692	MRPS18A	100	60.700	ENSOPRG00000007680	MRPS18A	100	60.700	Ochotona_princeps
ENSSSCG00000001692	MRPS18A	100	81.633	ENSODEG00000015388	MRPS18A	100	81.633	Octodon_degus
ENSSSCG00000001692	MRPS18A	84	68.485	ENSONIG00000000609	mrps18a	79	68.485	Oreochromis_niloticus
ENSSSCG00000001692	MRPS18A	81	80.503	ENSOANG00000001955	MRPS18A	100	80.503	Ornithorhynchus_anatinus
ENSSSCG00000001692	MRPS18A	100	83.673	ENSOCUG00000005544	MRPS18A	100	83.673	Oryctolagus_cuniculus
ENSSSCG00000001692	MRPS18A	84	66.265	ENSORLG00000023864	mrps18a	80	66.265	Oryzias_latipes
ENSSSCG00000001692	MRPS18A	84	65.663	ENSORLG00020002882	mrps18a	80	65.663	Oryzias_latipes_hni
ENSSSCG00000001692	MRPS18A	84	64.458	ENSORLG00015022065	mrps18a	80	64.458	Oryzias_latipes_hsok
ENSSSCG00000001692	MRPS18A	84	67.470	ENSOMEG00000018124	mrps18a	79	67.470	Oryzias_melastigma
ENSSSCG00000001692	MRPS18A	100	84.694	ENSOGAG00000026551	MRPS18A	100	84.694	Otolemur_garnettii
ENSSSCG00000001692	MRPS18A	100	88.776	ENSOARG00000008279	MRPS18A	100	88.776	Ovis_aries
ENSSSCG00000001692	MRPS18A	100	85.204	ENSPPAG00000036291	MRPS18A	99	88.095	Pan_paniscus
ENSSSCG00000001692	MRPS18A	100	87.245	ENSPPRG00000006429	MRPS18A	100	87.245	Panthera_pardus
ENSSSCG00000001692	MRPS18A	100	87.755	ENSPTIG00000001653	MRPS18A	100	87.755	Panthera_tigris_altaica
ENSSSCG00000001692	MRPS18A	100	85.204	ENSPTRG00000018209	MRPS18A	99	88.095	Pan_troglodytes
ENSSSCG00000001692	MRPS18A	100	82.143	ENSPANG00000006967	MRPS18A	99	83.333	Papio_anubis
ENSSSCG00000001692	MRPS18A	84	71.951	ENSPKIG00000012807	mrps18a	70	71.951	Paramormyrops_kingsleyae
ENSSSCG00000001692	MRPS18A	78	69.892	ENSPSIG00000013672	MRPS18A	85	63.190	Pelodiscus_sinensis
ENSSSCG00000001692	MRPS18A	65	70.229	ENSPMGG00000000493	mrps18a	82	64.417	Periophthalmus_magnuspinnatus
ENSSSCG00000001692	MRPS18A	100	79.592	ENSPEMG00000000405	Mrps18a	100	79.592	Peromyscus_maniculatus_bairdii
ENSSSCG00000001692	MRPS18A	84	62.424	ENSPMAG00000007012	mrps18a	90	62.424	Petromyzon_marinus
ENSSSCG00000001692	MRPS18A	100	78.571	ENSPCIG00000024858	MRPS18A	100	78.571	Phascolarctos_cinereus
ENSSSCG00000001692	MRPS18A	81	69.375	ENSPFOG00000009046	mrps18a	100	69.375	Poecilia_formosa
ENSSSCG00000001692	MRPS18A	84	68.675	ENSPLAG00000011106	mrps18a	79	68.675	Poecilia_latipinna
ENSSSCG00000001692	MRPS18A	84	68.675	ENSPMEG00000000736	mrps18a	82	69.128	Poecilia_mexicana
ENSSSCG00000001692	MRPS18A	84	69.880	ENSPREG00000012172	mrps18a	81	69.536	Poecilia_reticulata
ENSSSCG00000001692	MRPS18A	100	84.694	ENSPPYG00000017282	MRPS18A	100	84.694	Pongo_abelii
ENSSSCG00000001692	MRPS18A	81	67.633	ENSPCAG00000004192	MRPS18A	100	67.633	Procavia_capensis
ENSSSCG00000001692	MRPS18A	100	85.714	ENSPCOG00000014911	MRPS18A	100	85.714	Propithecus_coquereli
ENSSSCG00000001692	MRPS18A	100	59.398	ENSPVAG00000002758	MRPS18A	100	59.398	Pteropus_vampyrus
ENSSSCG00000001692	MRPS18A	84	68.485	ENSPNYG00000014753	mrps18a	79	68.485	Pundamilia_nyererei
ENSSSCG00000001692	MRPS18A	84	63.473	ENSPNAG00000023462	mrps18a	84	60.112	Pygocentrus_nattereri
ENSSSCG00000001692	MRPS18A	100	78.061	ENSRNOG00000019511	Mrps18a	100	78.061	Rattus_norvegicus
ENSSSCG00000001692	MRPS18A	100	81.633	ENSRBIG00000028789	MRPS18A	99	84.127	Rhinopithecus_bieti
ENSSSCG00000001692	MRPS18A	100	81.633	ENSRROG00000042368	-	99	84.127	Rhinopithecus_roxellana
ENSSSCG00000001692	MRPS18A	100	81.122	ENSSBOG00000019943	MRPS18A	99	82.540	Saimiri_boliviensis_boliviensis
ENSSSCG00000001692	MRPS18A	100	78.571	ENSSHAG00000015048	-	100	78.571	Sarcophilus_harrisii
ENSSSCG00000001692	MRPS18A	93	66.120	ENSSFOG00015005628	mrps18a	88	66.120	Scleropages_formosus
ENSSSCG00000001692	MRPS18A	84	69.277	ENSSMAG00000009353	mrps18a	80	69.277	Scophthalmus_maximus
ENSSSCG00000001692	MRPS18A	76	65.772	ENSSDUG00000011655	mrps18a	82	68.456	Seriola_dumerili
ENSSSCG00000001692	MRPS18A	71	69.286	ENSSLDG00000025435	mrps18a	75	69.286	Seriola_lalandi_dorsalis
ENSSSCG00000001692	MRPS18A	100	64.467	ENSSPUG00000011517	MRPS18A	100	64.467	Sphenodon_punctatus
ENSSSCG00000001692	MRPS18A	100	63.452	ENSSPAG00000000034	mrps18a	94	63.452	Stegastes_partitus
ENSSSCG00000001692	MRPS18A	76	70.946	ENSTGUG00000008142	MRPS18A	100	70.946	Taeniopygia_guttata
ENSSSCG00000001692	MRPS18A	87	66.860	ENSTRUG00000025134	mrps18a	82	66.860	Takifugu_rubripes
ENSSSCG00000001692	MRPS18A	98	60.697	ENSTNIG00000016302	mrps18a	96	60.697	Tetraodon_nigroviridis
ENSSSCG00000001692	MRPS18A	100	54.054	ENSTBEG00000004094	MRPS18A	100	54.054	Tupaia_belangeri
ENSSSCG00000001692	MRPS18A	100	78.161	ENSTTRG00000006354	MRPS18A	100	49.071	Tursiops_truncatus
ENSSSCG00000001692	MRPS18A	100	85.204	ENSUAMG00000013758	MRPS18A	100	85.204	Ursus_americanus
ENSSSCG00000001692	MRPS18A	100	84.694	ENSUMAG00000005910	MRPS18A	100	84.694	Ursus_maritimus
ENSSSCG00000001692	MRPS18A	77	70.395	ENSVVUG00000022444	-	75	70.395	Vulpes_vulpes
ENSSSCG00000001692	MRPS18A	100	85.714	ENSVVUG00000029092	-	100	85.714	Vulpes_vulpes
ENSSSCG00000001692	MRPS18A	76	62.416	ENSXETG00000003270	mrps18a	94	62.416	Xenopus_tropicalis
ENSSSCG00000001692	MRPS18A	78	66.667	ENSXCOG00000007223	mrps18a	81	68.627	Xiphophorus_couchianus
ENSSSCG00000001692	MRPS18A	84	68.072	ENSXMAG00000004867	mrps18a	81	68.627	Xiphophorus_maculatus