EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000001792 (Gene tree)
Gene ID: 100155652
Gene Symbol: EFL1
Alias: EFTUD1|FAM42A|FLJ13119|HsT19294|RIA1
Full Name: elongation factor like GTPase 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 137368 bases
Position: chr7:50839703-50977070
Accession: 100155652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000001959	GTP_EFTU	PF00009.27	3e-61	1	1
ENSSSCP00000028114	GTP_EFTU	PF00009.27	3e-61	1	1
ENSSSCP00000059386	GTP_EFTU	PF00009.27	4.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000002008	EFL1-202	3667	XM_021098870	ENSSSCP00000001959	1120 (aa)	XP_020954529	F1RID1
ENSSSCT00000048968	EFL1-203	4164	-	ENSSSCP00000059386	1069 (aa)	-	A0A287BT76
ENSSSCT00000029552	EFL1-201	4477	-	ENSSSCP00000028114	1120 (aa)	-	F1RID1

Gene Model

Click here to download ENSSSCG00000001792's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000001792's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000001792	EFL1	95	36.674	ENSSSCG00000025675	EEF2	98	36.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000001792	EFL1	100	92.730	ENSG00000140598	EFL1	100	100.000	Homo_sapiens
ENSSSCG00000001792	EFL1	99	68.158	ENSAPOG00000000188	efl1	99	68.158	Acanthochromis_polyacanthus
ENSSSCG00000001792	EFL1	100	92.376	ENSAMEG00000006031	EFL1	100	92.376	Ailuropoda_melanoleuca
ENSSSCG00000001792	EFL1	99	69.361	ENSACIG00000017802	efl1	99	69.982	Amphilophus_citrinellus
ENSSSCG00000001792	EFL1	99	68.486	ENSAOCG00000023933	efl1	99	68.838	Amphiprion_ocellaris
ENSSSCG00000001792	EFL1	99	68.407	ENSAPEG00000000262	efl1	99	68.407	Amphiprion_percula
ENSSSCG00000001792	EFL1	100	69.442	ENSATEG00000012373	efl1	100	69.353	Anabas_testudineus
ENSSSCG00000001792	EFL1	99	77.414	ENSAPLG00000011147	EFL1	99	77.414	Anas_platyrhynchos
ENSSSCG00000001792	EFL1	100	74.228	ENSACAG00000011040	EFL1	100	74.228	Anolis_carolinensis
ENSSSCG00000001792	EFL1	100	92.021	ENSANAG00000027459	EFL1	100	92.021	Aotus_nancymaae
ENSSSCG00000001792	EFL1	99	69.210	ENSACLG00000025780	efl1	100	69.115	Astatotilapia_calliptera
ENSSSCG00000001792	EFL1	100	69.478	ENSAMXG00000019529	efl1	100	69.565	Astyanax_mexicanus
ENSSSCG00000001792	EFL1	100	93.357	ENSBTAG00000003410	EFL1	100	93.357	Bos_taurus
ENSSSCG00000001792	EFL1	92	37.108	WBGene00010732	K10C3.5	92	57.658	Caenorhabditis_elegans
ENSSSCG00000001792	EFL1	84	100.000	ENSCJAG00000015607	-	93	100.000	Callithrix_jacchus
ENSSSCG00000001792	EFL1	100	91.933	ENSCAFG00000013671	EFL1	100	91.933	Canis_familiaris
ENSSSCG00000001792	EFL1	100	93.446	ENSCHIG00000001883	EFL1	100	93.446	Capra_hircus
ENSSSCG00000001792	EFL1	100	92.376	ENSTSYG00000000348	EFL1	100	92.376	Carlito_syrichta
ENSSSCG00000001792	EFL1	100	77.011	ENSCAPG00000017944	EFL1	100	76.835	Cavia_aperea
ENSSSCG00000001792	EFL1	100	90.160	ENSCPOG00000001924	EFL1	100	90.160	Cavia_porcellus
ENSSSCG00000001792	EFL1	100	92.110	ENSCCAG00000034450	EFL1	100	92.110	Cebus_capucinus
ENSSSCG00000001792	EFL1	100	91.933	ENSCATG00000031678	-	100	91.933	Cercocebus_atys
ENSSSCG00000001792	EFL1	100	89.814	ENSCLAG00000010155	EFL1	100	89.814	Chinchilla_lanigera
ENSSSCG00000001792	EFL1	100	91.844	ENSCSAG00000015165	EFL1	100	91.844	Chlorocebus_sabaeus
ENSSSCG00000001792	EFL1	77	89.706	ENSCHOG00000014029	EFL1	78	89.706	Choloepus_hoffmanni
ENSSSCG00000001792	EFL1	99	79.123	ENSCPBG00000017638	EFL1	99	79.123	Chrysemys_picta_bellii
ENSSSCG00000001792	EFL1	100	56.667	ENSCSAVG00000001787	-	100	55.536	Ciona_savignyi
ENSSSCG00000001792	EFL1	100	92.287	ENSCANG00000038093	EFL1	100	92.287	Colobus_angolensis_palliatus
ENSSSCG00000001792	EFL1	100	86.348	ENSCGRG00001010826	Efl1	100	86.348	Cricetulus_griseus_chok1gshd
ENSSSCG00000001792	EFL1	100	89.982	ENSCGRG00000003273	Efl1	100	89.982	Cricetulus_griseus_crigri
ENSSSCG00000001792	EFL1	99	65.493	ENSCSEG00000005856	efl1	99	65.581	Cynoglossus_semilaevis
ENSSSCG00000001792	EFL1	97	66.124	ENSCVAG00000011863	efl1	95	65.167	Cyprinodon_variegatus
ENSSSCG00000001792	EFL1	99	69.858	ENSDARG00000079672	efl1	98	69.947	Danio_rerio
ENSSSCG00000001792	EFL1	100	92.730	ENSDNOG00000006097	EFL1	100	92.730	Dasypus_novemcinctus
ENSSSCG00000001792	EFL1	100	88.308	ENSDORG00000000719	Efl1	100	88.308	Dipodomys_ordii
ENSSSCG00000001792	EFL1	99	45.187	FBgn0053158	CG33158	99	44.849	Drosophila_melanogaster
ENSSSCG00000001792	EFL1	97	81.471	ENSETEG00000004309	EFL1	99	81.471	Echinops_telfairi
ENSSSCG00000001792	EFL1	84	66.110	ENSEBUG00000010738	efl1	99	66.110	Eptatretus_burgeri
ENSSSCG00000001792	EFL1	100	89.982	ENSEASG00005007108	EFL1	100	89.982	Equus_asinus_asinus
ENSSSCG00000001792	EFL1	99	87.361	ENSECAG00000016354	EFL1	99	89.488	Equus_caballus
ENSSSCG00000001792	EFL1	73	88.218	ENSEEUG00000006326	EFL1	79	88.218	Erinaceus_europaeus
ENSSSCG00000001792	EFL1	100	65.358	ENSELUG00000002520	efl1	97	77.241	Esox_lucius
ENSSSCG00000001792	EFL1	100	89.096	ENSFCAG00000007741	EFL1	100	89.096	Felis_catus
ENSSSCG00000001792	EFL1	100	77.875	ENSFALG00000011103	EFL1	100	77.875	Ficedula_albicollis
ENSSSCG00000001792	EFL1	100	88.652	ENSFDAG00000009023	EFL1	100	88.652	Fukomys_damarensis
ENSSSCG00000001792	EFL1	100	67.753	ENSFHEG00000017795	efl1	100	67.753	Fundulus_heteroclitus
ENSSSCG00000001792	EFL1	99	65.419	ENSGMOG00000005041	efl1	100	64.884	Gadus_morhua
ENSSSCG00000001792	EFL1	100	77.564	ENSGALG00000006225	EFL1	100	77.564	Gallus_gallus
ENSSSCG00000001792	EFL1	99	66.607	ENSGACG00000012495	efl1	99	66.519	Gasterosteus_aculeatus
ENSSSCG00000001792	EFL1	100	78.596	ENSGAGG00000022841	EFL1	100	78.596	Gopherus_agassizii
ENSSSCG00000001792	EFL1	97	86.418	ENSGGOG00000005017	EFL1	100	86.418	Gorilla_gorilla
ENSSSCG00000001792	EFL1	99	68.566	ENSHBUG00000022667	efl1	100	68.739	Haplochromis_burtoni
ENSSSCG00000001792	EFL1	100	86.436	ENSHGLG00000011798	EFL1	100	86.436	Heterocephalus_glaber_female
ENSSSCG00000001792	EFL1	100	89.805	ENSHGLG00100010319	EFTUD1	98	97.531	Heterocephalus_glaber_male
ENSSSCG00000001792	EFL1	99	68.783	ENSHCOG00000007325	efl1	99	68.430	Hippocampus_comes
ENSSSCG00000001792	EFL1	99	68.645	ENSIPUG00000023360	EFTUD1	99	68.645	Ictalurus_punctatus
ENSSSCG00000001792	EFL1	100	89.450	ENSSTOG00000022945	EFL1	100	89.450	Ictidomys_tridecemlineatus
ENSSSCG00000001792	EFL1	100	89.805	ENSJJAG00000018598	Efl1	100	89.805	Jaculus_jaculus
ENSSSCG00000001792	EFL1	99	67.222	ENSLBEG00000015269	efl1	99	66.871	Labrus_bergylta
ENSSSCG00000001792	EFL1	100	72.353	ENSLACG00000016121	EFL1	100	72.353	Latimeria_chalumnae
ENSSSCG00000001792	EFL1	100	71.831	ENSLOCG00000012862	efl1	99	71.391	Lepisosteus_oculatus
ENSSSCG00000001792	EFL1	100	89.716	ENSLAFG00000012504	EFL1	100	89.716	Loxodonta_africana
ENSSSCG00000001792	EFL1	100	91.933	ENSMFAG00000032657	-	100	91.933	Macaca_fascicularis
ENSSSCG00000001792	EFL1	100	91.736	ENSMMUG00000023353	EFL1	100	91.736	Macaca_mulatta
ENSSSCG00000001792	EFL1	100	92.110	ENSMNEG00000041671	-	100	91.922	Macaca_nemestrina
ENSSSCG00000001792	EFL1	100	92.110	ENSMLEG00000033735	EFL1	100	92.110	Mandrillus_leucophaeus
ENSSSCG00000001792	EFL1	99	69.569	ENSMAMG00000011336	efl1	99	69.217	Mastacembelus_armatus
ENSSSCG00000001792	EFL1	99	68.895	ENSMZEG00005003012	efl1	100	68.645	Maylandia_zebra
ENSSSCG00000001792	EFL1	100	77.836	ENSMGAG00000007991	EFL1	100	77.836	Meleagris_gallopavo
ENSSSCG00000001792	EFL1	100	89.716	ENSMAUG00000010709	Efl1	100	89.716	Mesocricetus_auratus
ENSSSCG00000001792	EFL1	100	92.553	ENSMICG00000027853	EFL1	100	92.553	Microcebus_murinus
ENSSSCG00000001792	EFL1	100	89.007	ENSMOCG00000007470	Efl1	100	89.007	Microtus_ochrogaster
ENSSSCG00000001792	EFL1	100	65.181	ENSMMOG00000015370	efl1	100	65.088	Mola_mola
ENSSSCG00000001792	EFL1	100	84.141	ENSMODG00000019386	EFL1	100	84.141	Monodelphis_domestica
ENSSSCG00000001792	EFL1	100	67.948	ENSMALG00000018810	efl1	100	67.860	Monopterus_albus
ENSSSCG00000001792	EFL1	100	89.716	MGP_CAROLIEiJ_G0029936	Efl1	100	93.443	Mus_caroli
ENSSSCG00000001792	EFL1	100	89.805	ENSMUSG00000038563	Efl1	100	93.590	Mus_musculus
ENSSSCG00000001792	EFL1	100	89.362	MGP_PahariEiJ_G0013157	Efl1	100	93.590	Mus_pahari
ENSSSCG00000001792	EFL1	100	90.741	MGP_SPRETEiJ_G0031038	Efl1	100	90.034	Mus_spretus
ENSSSCG00000001792	EFL1	100	88.564	ENSMPUG00000015494	EFL1	100	88.918	Mustela_putorius_furo
ENSSSCG00000001792	EFL1	100	90.514	ENSNGAG00000017740	Efl1	100	90.514	Nannospalax_galili
ENSSSCG00000001792	EFL1	97	92.065	ENSNLEG00000010679	EFL1	100	92.065	Nomascus_leucogenys
ENSSSCG00000001792	EFL1	63	94.340	ENSMEUG00000012049	-	70	94.340	Notamacropus_eugenii
ENSSSCG00000001792	EFL1	63	90.244	ENSOPRG00000012488	-	63	90.244	Ochotona_princeps
ENSSSCG00000001792	EFL1	100	88.918	ENSODEG00000016193	EFL1	100	88.918	Octodon_degus
ENSSSCG00000001792	EFL1	99	68.186	ENSONIG00000003394	efl1	100	68.269	Oreochromis_niloticus
ENSSSCG00000001792	EFL1	100	90.426	ENSOCUG00000012163	EFL1	100	90.426	Oryctolagus_cuniculus
ENSSSCG00000001792	EFL1	66	62.361	ENSORLG00000020390	efl1	100	62.778	Oryzias_latipes
ENSSSCG00000001792	EFL1	95	71.861	ENSORLG00015012031	efl1	94	73.593	Oryzias_latipes_hsok
ENSSSCG00000001792	EFL1	99	67.380	ENSOMEG00000022784	efl1	99	67.142	Oryzias_melastigma
ENSSSCG00000001792	EFL1	100	93.540	ENSOARG00000014452	EFL1	100	93.540	Ovis_aries
ENSSSCG00000001792	EFL1	100	87.057	ENSPPAG00000039672	EFL1	100	87.057	Pan_paniscus
ENSSSCG00000001792	EFL1	100	89.628	ENSPPRG00000002193	EFL1	100	89.628	Panthera_pardus
ENSSSCG00000001792	EFL1	100	89.539	ENSPTIG00000007053	EFL1	100	89.539	Panthera_tigris_altaica
ENSSSCG00000001792	EFL1	100	92.553	ENSPTRG00000007374	EFL1	100	92.553	Pan_troglodytes
ENSSSCG00000001792	EFL1	100	92.110	ENSPANG00000015635	-	100	91.922	Papio_anubis
ENSSSCG00000001792	EFL1	100	68.655	ENSPKIG00000018456	efl1	100	68.744	Paramormyrops_kingsleyae
ENSSSCG00000001792	EFL1	100	78.371	ENSPSIG00000007790	EFL1	100	78.371	Pelodiscus_sinensis
ENSSSCG00000001792	EFL1	97	61.204	ENSPMAG00000002026	efl1	100	61.111	Petromyzon_marinus
ENSSSCG00000001792	EFL1	100	83.951	ENSPCIG00000004372	EFL1	100	83.951	Phascolarctos_cinereus
ENSSSCG00000001792	EFL1	99	67.407	ENSPFOG00000018687	efl1	99	66.902	Poecilia_formosa
ENSSSCG00000001792	EFL1	100	67.286	ENSPLAG00000001988	efl1	99	66.990	Poecilia_latipinna
ENSSSCG00000001792	EFL1	99	67.733	ENSPMEG00000000402	efl1	99	67.226	Poecilia_mexicana
ENSSSCG00000001792	EFL1	99	67.851	ENSPREG00000022085	efl1	99	67.673	Poecilia_reticulata
ENSSSCG00000001792	EFL1	100	92.642	ENSPPYG00000006724	EFL1	100	92.642	Pongo_abelii
ENSSSCG00000001792	EFL1	100	89.982	ENSPVAG00000003189	EFL1	100	89.982	Pteropus_vampyrus
ENSSSCG00000001792	EFL1	99	63.815	ENSPNYG00000019406	efl1	100	64.089	Pundamilia_nyererei
ENSSSCG00000001792	EFL1	100	70.341	ENSPNAG00000012104	efl1	100	70.254	Pygocentrus_nattereri
ENSSSCG00000001792	EFL1	100	89.450	ENSRNOG00000032723	Efl1	100	89.450	Rattus_norvegicus
ENSSSCG00000001792	EFL1	100	91.844	ENSRBIG00000040576	EFL1	100	91.844	Rhinopithecus_bieti
ENSSSCG00000001792	EFL1	100	89.196	ENSRROG00000031475	EFL1	100	88.929	Rhinopithecus_roxellana
ENSSSCG00000001792	EFL1	96	46.567	YNL163C	RIA1	85	46.544	Saccharomyces_cerevisiae
ENSSSCG00000001792	EFL1	100	91.844	ENSSBOG00000018280	EFL1	100	91.844	Saimiri_boliviensis_boliviensis
ENSSSCG00000001792	EFL1	100	79.525	ENSSHAG00000018863	EFL1	100	79.525	Sarcophilus_harrisii
ENSSSCG00000001792	EFL1	100	70.338	ENSSFOG00015016244	efl1	100	70.338	Scleropages_formosus
ENSSSCG00000001792	EFL1	99	67.549	ENSSMAG00000016928	efl1	99	67.549	Scophthalmus_maximus
ENSSSCG00000001792	EFL1	99	68.640	ENSSDUG00000013271	efl1	99	68.551	Seriola_dumerili
ENSSSCG00000001792	EFL1	99	68.905	ENSSLDG00000014655	efl1	99	68.816	Seriola_lalandi_dorsalis
ENSSSCG00000001792	EFL1	100	77.535	ENSSPUG00000000941	EFL1	100	77.535	Sphenodon_punctatus
ENSSSCG00000001792	EFL1	99	67.926	ENSSPAG00000011885	efl1	100	67.660	Stegastes_partitus
ENSSSCG00000001792	EFL1	100	79.204	ENSTGUG00000007850	EFL1	100	79.204	Taeniopygia_guttata
ENSSSCG00000001792	EFL1	100	61.174	ENSTNIG00000003399	efl1	100	61.174	Tetraodon_nigroviridis
ENSSSCG00000001792	EFL1	77	95.890	ENSTBEG00000011804	EFL1	79	95.890	Tupaia_belangeri
ENSSSCG00000001792	EFL1	100	92.383	ENSTTRG00000011243	EFL1	100	92.383	Tursiops_truncatus
ENSSSCG00000001792	EFL1	100	92.376	ENSUAMG00000022106	EFL1	100	92.376	Ursus_americanus
ENSSSCG00000001792	EFL1	100	92.553	ENSUMAG00000010303	EFL1	100	92.553	Ursus_maritimus
ENSSSCG00000001792	EFL1	94	98.361	ENSVPAG00000005735	EFL1	93	98.361	Vicugna_pacos
ENSSSCG00000001792	EFL1	100	91.933	ENSVVUG00000004967	EFL1	100	91.933	Vulpes_vulpes
ENSSSCG00000001792	EFL1	100	75.000	ENSXETG00000015701	EFL1	100	75.000	Xenopus_tropicalis
ENSSSCG00000001792	EFL1	100	67.582	ENSXMAG00000023705	efl1	100	67.342	Xiphophorus_maculatus