EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000001827 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 1712 bases
Position: chr7:54061328-54063039
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000031707	KH_1	PF00013.29	9e-12	1	1
ENSSSCP00000001998	KH_1	PF00013.29	1.1e-11	1	1
ENSSSCP00000024042	KH_1	PF00013.29	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000002047	-	1599	-	ENSSSCP00000001998	532 (aa)	-	F1RMH0
ENSSSCT00000048946	-	1521	-	ENSSSCP00000031707	506 (aa)	-	A0A286ZJJ8
ENSSSCT00000028696	-	1611	-	ENSSSCP00000024042	536 (aa)	-	I3LIY5

Gene Model

Click here to download ENSSSCG00000001827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000001827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000001827	-	100	68.166	ENSSSCG00000023128	-	100	68.166
ENSSSCG00000001827	-	96	48.022	ENSSSCG00000011795	IGF2BP2	98	47.176
ENSSSCG00000001827	-	100	54.596	ENSSSCG00000036695	IGF2BP3	100	53.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000001827	-	100	68.166	ENSG00000159217	IGF2BP1	98	73.913	Homo_sapiens
ENSSSCG00000001827	-	99	68.972	ENSAMEG00000005087	IGF2BP1	96	68.467	Ailuropoda_melanoleuca
ENSSSCG00000001827	-	91	65.000	ENSAPLG00000012620	IGF2BP1	100	65.000	Anas_platyrhynchos
ENSSSCG00000001827	-	100	64.410	ENSACAG00000006199	IGF2BP1	100	64.410	Anolis_carolinensis
ENSSSCG00000001827	-	100	68.166	ENSANAG00000022606	IGF2BP1	98	73.913	Aotus_nancymaae
ENSSSCG00000001827	-	100	67.993	ENSBTAG00000011736	IGF2BP1	100	67.993	Bos_taurus
ENSSSCG00000001827	-	100	68.166	ENSCJAG00000007258	IGF2BP1	98	73.913	Callithrix_jacchus
ENSSSCG00000001827	-	100	68.339	ENSCAFG00000016907	IGF2BP1	100	68.339	Canis_familiaris
ENSSSCG00000001827	-	100	68.339	ENSCAFG00020023369	IGF2BP1	100	68.339	Canis_lupus_dingo
ENSSSCG00000001827	-	100	67.993	ENSCHIG00000022316	IGF2BP1	100	67.993	Capra_hircus
ENSSSCG00000001827	-	100	68.166	ENSTSYG00000003912	IGF2BP1	98	73.913	Carlito_syrichta
ENSSSCG00000001827	-	82	67.195	ENSCAPG00000008985	IGF2BP1	100	67.195	Cavia_aperea
ENSSSCG00000001827	-	96	67.518	ENSCPOG00000020174	IGF2BP1	100	67.518	Cavia_porcellus
ENSSSCG00000001827	-	100	65.744	ENSCCAG00000031817	IGF2BP1	100	66.864	Cebus_capucinus
ENSSSCG00000001827	-	100	68.166	ENSCATG00000041707	IGF2BP1	98	73.913	Cercocebus_atys
ENSSSCG00000001827	-	100	66.782	ENSCLAG00000015853	IGF2BP1	100	66.782	Chinchilla_lanigera
ENSSSCG00000001827	-	100	68.166	ENSCSAG00000002487	IGF2BP1	100	68.166	Chlorocebus_sabaeus
ENSSSCG00000001827	-	87	54.140	ENSCHOG00000002349	IGF2BP1	98	54.140	Choloepus_hoffmanni
ENSSSCG00000001827	-	100	60.606	ENSCPBG00000027315	IGF2BP1	100	60.606	Chrysemys_picta_bellii
ENSSSCG00000001827	-	100	68.166	ENSCANG00000032567	IGF2BP1	98	73.913	Colobus_angolensis_palliatus
ENSSSCG00000001827	-	91	61.493	ENSCGRG00001006706	-	97	58.932	Cricetulus_griseus_chok1gshd
ENSSSCG00000001827	-	100	68.166	ENSCGRG00001000282	-	100	68.166	Cricetulus_griseus_chok1gshd
ENSSSCG00000001827	-	82	58.277	ENSCGRG00001003571	-	100	58.259	Cricetulus_griseus_chok1gshd
ENSSSCG00000001827	-	100	68.166	ENSCGRG00000014555	Igf2bp1	100	68.166	Cricetulus_griseus_crigri
ENSSSCG00000001827	-	100	65.458	ENSDNOG00000006801	IGF2BP1	100	65.458	Dasypus_novemcinctus
ENSSSCG00000001827	-	100	62.762	ENSDORG00000014371	Igf2bp1	100	62.762	Dipodomys_ordii
ENSSSCG00000001827	-	82	69.796	ENSETEG00000003370	IGF2BP1	88	69.796	Echinops_telfairi
ENSSSCG00000001827	-	100	68.166	ENSEASG00005000301	IGF2BP1	100	68.166	Equus_asinus_asinus
ENSSSCG00000001827	-	100	68.166	ENSECAG00000009723	IGF2BP1	100	68.166	Equus_caballus
ENSSSCG00000001827	-	91	73.529	ENSEEUG00000010947	IGF2BP1	89	73.529	Erinaceus_europaeus
ENSSSCG00000001827	-	100	68.339	ENSFCAG00000002454	IGF2BP1	98	73.913	Felis_catus
ENSSSCG00000001827	-	68	71.212	ENSFALG00000011366	IGF2BP1	98	46.568	Ficedula_albicollis
ENSSSCG00000001827	-	95	65.702	ENSFDAG00000017420	IGF2BP1	99	65.702	Fukomys_damarensis
ENSSSCG00000001827	-	100	64.522	ENSGALG00000041204	IGF2BP1	100	64.522	Gallus_gallus
ENSSSCG00000001827	-	82	58.969	ENSGAGG00000021663	IGF2BP1	100	59.031	Gopherus_agassizii
ENSSSCG00000001827	-	100	68.166	ENSGGOG00000008872	IGF2BP1	98	73.913	Gorilla_gorilla
ENSSSCG00000001827	-	100	67.301	ENSHGLG00000010492	IGF2BP1	100	67.301	Heterocephalus_glaber_female
ENSSSCG00000001827	-	100	67.301	ENSHGLG00100006606	IGF2BP1	100	67.301	Heterocephalus_glaber_male
ENSSSCG00000001827	-	100	68.166	ENSSTOG00000010643	IGF2BP1	100	68.166	Ictidomys_tridecemlineatus
ENSSSCG00000001827	-	100	67.474	ENSJJAG00000002687	Igf2bp1	100	67.474	Jaculus_jaculus
ENSSSCG00000001827	-	100	68.166	ENSLAFG00000002048	IGF2BP1	100	68.166	Loxodonta_africana
ENSSSCG00000001827	-	100	68.166	ENSMFAG00000001613	IGF2BP1	98	73.913	Macaca_fascicularis
ENSSSCG00000001827	-	92	73.913	ENSMMUG00000011533	IGF2BP1	98	73.913	Macaca_mulatta
ENSSSCG00000001827	-	100	68.166	ENSMNEG00000033825	IGF2BP1	98	73.913	Macaca_nemestrina
ENSSSCG00000001827	-	100	68.166	ENSMLEG00000026086	IGF2BP1	98	73.913	Mandrillus_leucophaeus
ENSSSCG00000001827	-	86	64.516	ENSMGAG00000002497	IGF2BP1	100	64.482	Meleagris_gallopavo
ENSSSCG00000001827	-	82	53.776	ENSMICG00000043511	-	99	53.776	Microcebus_murinus
ENSSSCG00000001827	-	92	73.043	ENSMICG00000013324	-	98	73.043	Microcebus_murinus
ENSSSCG00000001827	-	100	68.166	ENSMOCG00000010232	Igf2bp1	100	68.166	Microtus_ochrogaster
ENSSSCG00000001827	-	100	66.782	ENSMODG00000012268	IGF2BP1	100	66.782	Monodelphis_domestica
ENSSSCG00000001827	-	100	67.647	MGP_CAROLIEiJ_G0017016	Igf2bp1	100	67.647	Mus_caroli
ENSSSCG00000001827	-	100	67.647	ENSMUSG00000013415	Igf2bp1	100	67.647	Mus_musculus
ENSSSCG00000001827	-	100	67.647	MGP_SPRETEiJ_G0017862	Igf2bp1	100	67.647	Mus_spretus
ENSSSCG00000001827	-	87	66.456	ENSMPUG00000015358	IGF2BP1	100	65.089	Mustela_putorius_furo
ENSSSCG00000001827	-	76	60.741	ENSMLUG00000016891	-	99	63.636	Myotis_lucifugus
ENSSSCG00000001827	-	83	48.954	ENSMLUG00000023642	-	100	48.536	Myotis_lucifugus
ENSSSCG00000001827	-	100	68.166	ENSNGAG00000015679	Igf2bp1	100	68.166	Nannospalax_galili
ENSSSCG00000001827	-	100	68.166	ENSNLEG00000002786	IGF2BP1	98	73.913	Nomascus_leucogenys
ENSSSCG00000001827	-	65	75.401	ENSMEUG00000002152	-	64	75.401	Notamacropus_eugenii
ENSSSCG00000001827	-	91	64.933	ENSOPRG00000010207	IGF2BP1	100	64.933	Ochotona_princeps
ENSSSCG00000001827	-	100	67.474	ENSODEG00000016991	-	100	67.474	Octodon_degus
ENSSSCG00000001827	-	88	63.557	ENSODEG00000014533	-	92	62.834	Octodon_degus
ENSSSCG00000001827	-	64	54.813	ENSOANG00000014859	-	99	54.420	Ornithorhynchus_anatinus
ENSSSCG00000001827	-	99	68.134	ENSOCUG00000004411	IGF2BP1	99	68.134	Oryctolagus_cuniculus
ENSSSCG00000001827	-	100	68.111	ENSOGAG00000001270	IGF2BP1	100	68.111	Otolemur_garnettii
ENSSSCG00000001827	-	100	67.820	ENSOARG00000006509	IGF2BP1	100	67.820	Ovis_aries
ENSSSCG00000001827	-	100	68.166	ENSPPAG00000040224	IGF2BP1	98	73.913	Pan_paniscus
ENSSSCG00000001827	-	100	68.339	ENSPPRG00000008067	IGF2BP1	98	73.913	Panthera_pardus
ENSSSCG00000001827	-	100	68.339	ENSPTIG00000013291	IGF2BP1	98	73.913	Panthera_tigris_altaica
ENSSSCG00000001827	-	100	68.166	ENSPTRG00000009368	IGF2BP1	98	73.913	Pan_troglodytes
ENSSSCG00000001827	-	100	68.166	ENSPANG00000022833	IGF2BP1	98	73.913	Papio_anubis
ENSSSCG00000001827	-	84	55.761	ENSPSIG00000005175	IGF2BP1	100	56.164	Pelodiscus_sinensis
ENSSSCG00000001827	-	100	67.993	ENSPEMG00000021974	Igf2bp1	100	67.993	Peromyscus_maniculatus_bairdii
ENSSSCG00000001827	-	100	66.955	ENSPCIG00000013111	IGF2BP1	100	66.955	Phascolarctos_cinereus
ENSSSCG00000001827	-	100	68.166	ENSPPYG00000008913	IGF2BP1	100	68.166	Pongo_abelii
ENSSSCG00000001827	-	100	62.738	ENSPCAG00000016601	IGF2BP1	100	62.738	Procavia_capensis
ENSSSCG00000001827	-	100	68.111	ENSPCOG00000006475	IGF2BP1	98	73.043	Propithecus_coquereli
ENSSSCG00000001827	-	83	73.913	ENSPVAG00000001718	IGF2BP1	83	73.913	Pteropus_vampyrus
ENSSSCG00000001827	-	100	67.820	ENSRNOG00000006122	Igf2bp1	100	67.820	Rattus_norvegicus
ENSSSCG00000001827	-	100	68.166	ENSRBIG00000035739	IGF2BP1	98	73.913	Rhinopithecus_bieti
ENSSSCG00000001827	-	100	68.166	ENSRROG00000039581	IGF2BP1	98	73.913	Rhinopithecus_roxellana
ENSSSCG00000001827	-	100	67.993	ENSSBOG00000020973	IGF2BP1	98	73.043	Saimiri_boliviensis_boliviensis
ENSSSCG00000001827	-	100	66.782	ENSSHAG00000014259	IGF2BP1	100	66.782	Sarcophilus_harrisii
ENSSSCG00000001827	-	55	66.118	ENSSARG00000013201	-	59	66.118	Sorex_araneus
ENSSSCG00000001827	-	100	63.589	ENSSPUG00000006526	IGF2BP1	100	63.589	Sphenodon_punctatus
ENSSSCG00000001827	-	100	55.903	ENSTBEG00000004254	IGF2BP1	100	55.903	Tupaia_belangeri
ENSSSCG00000001827	-	100	65.571	ENSTTRG00000007197	IGF2BP1	100	65.571	Tursiops_truncatus
ENSSSCG00000001827	-	100	68.339	ENSUAMG00000023269	IGF2BP1	100	68.339	Ursus_americanus
ENSSSCG00000001827	-	100	68.166	ENSUMAG00000015682	IGF2BP1	100	68.166	Ursus_maritimus
ENSSSCG00000001827	-	81	57.823	ENSVPAG00000007657	IGF2BP1	83	57.080	Vicugna_pacos
ENSSSCG00000001827	-	100	68.339	ENSVVUG00000003451	IGF2BP1	100	68.339	Vulpes_vulpes