EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000001855 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 171 bases
Position: chr7:55719985-55720155
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000002029	Ribosomal_S14	PF00253.21	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000002079	-	171	-	ENSSSCP00000002029	56 (aa)	-	F1SJZ7

Gene Model

Click here to download ENSSSCG00000001855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000001855's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000001855	-	100	76.786	ENSSSCG00000035779	-	100	76.786
ENSSSCG00000001855	-	100	75.000	ENSSSCG00000037150	-	100	75.000
ENSSSCG00000001855	-	88	53.061	ENSSSCG00000039388	-	88	53.061
ENSSSCG00000001855	-	100	78.571	ENSSSCG00000038507	-	100	78.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000001855	-	100	71.429	ENSACIG00000003518	rps29	75	71.429	Amphilophus_citrinellus
ENSSSCG00000001855	-	98	78.182	ENSANAG00000024423	-	100	78.182	Aotus_nancymaae
ENSSSCG00000001855	-	100	78.571	ENSBTAG00000052337	RPS29	100	78.571	Bos_taurus
ENSSSCG00000001855	-	100	71.429	ENSCJAG00000031814	-	100	71.429	Callithrix_jacchus
ENSSSCG00000001855	-	100	78.571	ENSCJAG00000039096	-	100	78.571	Callithrix_jacchus
ENSSSCG00000001855	-	100	73.214	ENSCAFG00020002956	-	100	73.214	Canis_lupus_dingo
ENSSSCG00000001855	-	100	78.571	ENSCAFG00020003021	-	100	78.571	Canis_lupus_dingo
ENSSSCG00000001855	-	98	58.182	ENSCAFG00020021989	-	50	58.182	Canis_lupus_dingo
ENSSSCG00000001855	-	100	78.571	ENSCHIG00000010682	-	100	78.571	Capra_hircus
ENSSSCG00000001855	-	100	78.571	ENSTSYG00000030415	-	100	78.571	Carlito_syrichta
ENSSSCG00000001855	-	100	62.500	ENSTSYG00000012410	-	100	62.500	Carlito_syrichta
ENSSSCG00000001855	-	100	78.571	ENSCPOG00000032637	-	100	78.571	Cavia_porcellus
ENSSSCG00000001855	-	100	76.786	ENSCCAG00000032225	-	100	76.786	Cebus_capucinus
ENSSSCG00000001855	-	100	78.571	ENSCCAG00000019033	-	100	78.571	Cebus_capucinus
ENSSSCG00000001855	-	100	78.571	ENSCCAG00000001210	-	100	78.571	Cebus_capucinus
ENSSSCG00000001855	-	100	78.571	ENSCCAG00000019847	-	100	78.571	Cebus_capucinus
ENSSSCG00000001855	-	100	78.571	ENSCCAG00000032090	-	100	78.571	Cebus_capucinus
ENSSSCG00000001855	-	100	76.786	ENSCCAG00000020608	-	100	76.786	Cebus_capucinus
ENSSSCG00000001855	-	100	58.929	ENSCATG00000041319	-	100	58.929	Cercocebus_atys
ENSSSCG00000001855	-	100	78.571	ENSCATG00000017816	-	100	78.571	Cercocebus_atys
ENSSSCG00000001855	-	100	78.571	ENSCATG00000011469	-	100	78.571	Cercocebus_atys
ENSSSCG00000001855	-	100	78.571	ENSCSAG00000015276	-	100	78.571	Chlorocebus_sabaeus
ENSSSCG00000001855	-	91	64.706	ENSCHOG00000011358	-	93	64.706	Choloepus_hoffmanni
ENSSSCG00000001855	-	100	71.429	ENSCPBG00000019385	-	100	71.429	Chrysemys_picta_bellii
ENSSSCG00000001855	-	100	78.571	ENSCPBG00000018320	-	100	78.571	Chrysemys_picta_bellii
ENSSSCG00000001855	-	98	58.182	ENSCPBG00000015078	-	64	58.182	Chrysemys_picta_bellii
ENSSSCG00000001855	-	100	76.786	ENSCANG00000010019	-	100	76.786	Colobus_angolensis_palliatus
ENSSSCG00000001855	-	100	78.571	ENSCANG00000019407	-	100	78.571	Colobus_angolensis_palliatus
ENSSSCG00000001855	-	100	78.571	ENSCANG00000037526	-	100	78.571	Colobus_angolensis_palliatus
ENSSSCG00000001855	-	100	78.571	ENSCGRG00001001537	-	92	78.571	Cricetulus_griseus_chok1gshd
ENSSSCG00000001855	-	100	78.571	ENSCGRG00001020113	Rps29	100	78.571	Cricetulus_griseus_chok1gshd
ENSSSCG00000001855	-	100	73.214	ENSCGRG00001010167	-	100	73.214	Cricetulus_griseus_chok1gshd
ENSSSCG00000001855	-	100	71.429	ENSCGRG00001005461	-	100	71.429	Cricetulus_griseus_chok1gshd
ENSSSCG00000001855	-	100	66.071	ENSCGRG00001000990	-	66	66.071	Cricetulus_griseus_chok1gshd
ENSSSCG00000001855	-	100	66.071	ENSCGRG00000019197	-	66	66.071	Cricetulus_griseus_crigri
ENSSSCG00000001855	-	100	58.929	ENSCGRG00000009208	-	100	58.929	Cricetulus_griseus_crigri
ENSSSCG00000001855	-	100	73.214	ENSCGRG00000019055	-	100	73.214	Cricetulus_griseus_crigri
ENSSSCG00000001855	-	100	71.429	ENSCGRG00000019460	-	100	71.429	Cricetulus_griseus_crigri
ENSSSCG00000001855	-	100	78.571	ENSCGRG00000018591	-	92	78.571	Cricetulus_griseus_crigri
ENSSSCG00000001855	-	98	74.545	ENSCSEG00000001818	rps29	60	74.545	Cynoglossus_semilaevis
ENSSSCG00000001855	-	100	75.000	ENSDARG00000041232	rps29	100	75.000	Danio_rerio
ENSSSCG00000001855	-	100	73.214	ENSDORG00000026532	-	100	73.214	Dipodomys_ordii
ENSSSCG00000001855	-	100	76.786	ENSDORG00000028731	-	100	76.786	Dipodomys_ordii
ENSSSCG00000001855	-	100	68.333	ENSDORG00000013874	-	100	68.333	Dipodomys_ordii
ENSSSCG00000001855	-	100	62.500	ENSEBUG00000011966	rps29	65	62.500	Eptatretus_burgeri
ENSSSCG00000001855	-	98	74.545	ENSEASG00005007821	-	65	74.545	Equus_asinus_asinus
ENSSSCG00000001855	-	98	65.455	ENSEASG00005020582	-	95	65.455	Equus_asinus_asinus
ENSSSCG00000001855	-	98	74.545	ENSECAG00000011782	RPS29	65	74.545	Equus_caballus
ENSSSCG00000001855	-	100	71.429	ENSFCAG00000024162	-	100	71.429	Felis_catus
ENSSSCG00000001855	-	100	78.571	ENSFALG00000001738	-	92	78.571	Ficedula_albicollis
ENSSSCG00000001855	-	100	78.571	ENSFALG00000001808	-	92	78.571	Ficedula_albicollis
ENSSSCG00000001855	-	100	76.786	ENSGACG00000012858	rps29	100	76.786	Gasterosteus_aculeatus
ENSSSCG00000001855	-	98	72.727	ENSGAGG00000016743	-	92	72.727	Gopherus_agassizii
ENSSSCG00000001855	-	84	70.213	ENSGAGG00000025088	-	57	70.213	Gopherus_agassizii
ENSSSCG00000001855	-	100	78.571	ENSGGOG00000042996	-	100	78.571	Gorilla_gorilla
ENSSSCG00000001855	-	100	76.786	ENSGGOG00000042896	-	100	76.786	Gorilla_gorilla
ENSSSCG00000001855	-	100	75.000	ENSHBUG00000018115	rps29	100	75.000	Haplochromis_burtoni
ENSSSCG00000001855	-	100	62.500	ENSJJAG00000011627	-	100	62.500	Jaculus_jaculus
ENSSSCG00000001855	-	100	78.571	ENSLAFG00000031145	-	100	78.571	Loxodonta_africana
ENSSSCG00000001855	-	100	78.571	ENSMFAG00000026635	-	100	78.571	Macaca_fascicularis
ENSSSCG00000001855	-	100	78.571	ENSMMUG00000043502	-	100	78.571	Macaca_mulatta
ENSSSCG00000001855	-	100	78.571	ENSMMUG00000040278	-	100	78.571	Macaca_mulatta
ENSSSCG00000001855	-	100	73.214	ENSMMUG00000043202	-	100	73.214	Macaca_mulatta
ENSSSCG00000001855	-	100	78.571	ENSMMUG00000008939	-	100	78.571	Macaca_mulatta
ENSSSCG00000001855	-	100	76.786	ENSMMUG00000032153	-	100	76.786	Macaca_mulatta
ENSSSCG00000001855	-	100	78.571	ENSMNEG00000037893	-	100	78.571	Macaca_nemestrina
ENSSSCG00000001855	-	100	78.571	ENSMNEG00000027952	-	100	78.571	Macaca_nemestrina
ENSSSCG00000001855	-	100	76.786	ENSMLEG00000026733	-	100	76.786	Mandrillus_leucophaeus
ENSSSCG00000001855	-	100	75.000	ENSMZEG00005012261	rps29	100	75.000	Maylandia_zebra
ENSSSCG00000001855	-	100	78.571	ENSMGAG00000013705	-	100	78.571	Meleagris_gallopavo
ENSSSCG00000001855	-	100	73.214	ENSMAUG00000005362	-	100	73.214	Mesocricetus_auratus
ENSSSCG00000001855	-	98	69.091	ENSMAUG00000019410	-	100	69.091	Mesocricetus_auratus
ENSSSCG00000001855	-	61	70.588	ENSMAUG00000000899	-	97	70.588	Mesocricetus_auratus
ENSSSCG00000001855	-	100	78.571	ENSMICG00000045654	-	100	78.571	Microcebus_murinus
ENSSSCG00000001855	-	100	78.571	ENSMICG00000041582	-	100	78.571	Microcebus_murinus
ENSSSCG00000001855	-	100	78.571	ENSMOCG00000017681	Rps29	100	78.571	Microtus_ochrogaster
ENSSSCG00000001855	-	100	75.000	ENSMMOG00000005119	rps29	53	75.000	Mola_mola
ENSSSCG00000001855	-	100	78.571	ENSMODG00000025305	-	100	78.571	Monodelphis_domestica
ENSSSCG00000001855	-	100	78.571	MGP_CAROLIEiJ_G0017795	-	100	78.571	Mus_caroli
ENSSSCG00000001855	-	100	78.571	ENSMUSG00000034892	Rps29	100	78.571	Mus_musculus
ENSSSCG00000001855	-	100	78.571	MGP_PahariEiJ_G0029551	-	100	78.571	Mus_pahari
ENSSSCG00000001855	-	100	78.571	MGP_SPRETEiJ_G0018641	Rps29	100	78.571	Mus_spretus
ENSSSCG00000001855	-	100	73.214	MGP_SPRETEiJ_G0019597	-	92	73.214	Mus_spretus
ENSSSCG00000001855	-	100	78.571	ENSMLUG00000025262	-	100	78.571	Myotis_lucifugus
ENSSSCG00000001855	-	100	69.643	ENSMLUG00000029871	-	100	69.643	Myotis_lucifugus
ENSSSCG00000001855	-	98	78.182	ENSMLUG00000025007	-	100	78.182	Myotis_lucifugus
ENSSSCG00000001855	-	100	75.000	ENSNGAG00000011632	-	100	75.000	Nannospalax_galili
ENSSSCG00000001855	-	100	78.571	ENSNGAG00000013159	Rps29	100	78.571	Nannospalax_galili
ENSSSCG00000001855	-	100	71.429	ENSNBRG00000021854	rps29	70	71.429	Neolamprologus_brichardi
ENSSSCG00000001855	-	100	64.286	ENSNLEG00000031810	-	64	64.286	Nomascus_leucogenys
ENSSSCG00000001855	-	100	76.786	ENSNLEG00000018259	-	100	76.786	Nomascus_leucogenys
ENSSSCG00000001855	-	93	76.923	ENSODEG00000019249	-	100	76.923	Octodon_degus
ENSSSCG00000001855	-	100	78.571	ENSODEG00000019220	-	100	78.571	Octodon_degus
ENSSSCG00000001855	-	100	76.786	ENSODEG00000019457	-	100	76.786	Octodon_degus
ENSSSCG00000001855	-	100	78.571	ENSODEG00000018519	-	100	78.571	Octodon_degus
ENSSSCG00000001855	-	100	82.143	ENSODEG00000019960	-	100	82.143	Octodon_degus
ENSSSCG00000001855	-	100	75.000	ENSONIG00000000829	rps29	100	75.000	Oreochromis_niloticus
ENSSSCG00000001855	-	100	78.571	ENSOCUG00000027423	RPS29	100	78.571	Oryctolagus_cuniculus
ENSSSCG00000001855	-	98	74.545	ENSOMEG00000010831	rps29	69	74.545	Oryzias_melastigma
ENSSSCG00000001855	-	100	73.214	ENSOGAG00000033843	-	100	73.214	Otolemur_garnettii
ENSSSCG00000001855	-	100	73.214	ENSOGAG00000032475	-	100	73.214	Otolemur_garnettii
ENSSSCG00000001855	-	100	71.429	ENSOARG00000007891	-	92	71.429	Ovis_aries
ENSSSCG00000001855	-	100	76.786	ENSPPRG00000011061	-	100	76.786	Panthera_pardus
ENSSSCG00000001855	-	100	69.643	ENSPPRG00000017352	-	100	69.643	Panthera_pardus
ENSSSCG00000001855	-	100	78.571	ENSPPRG00000022391	-	100	78.571	Panthera_pardus
ENSSSCG00000001855	-	100	78.571	ENSPTIG00000006207	-	100	78.571	Panthera_tigris_altaica
ENSSSCG00000001855	-	100	78.571	ENSPANG00000023730	-	100	78.571	Papio_anubis
ENSSSCG00000001855	-	100	69.643	ENSPANG00000029212	-	100	69.643	Papio_anubis
ENSSSCG00000001855	-	100	78.571	ENSPANG00000033247	-	100	78.571	Papio_anubis
ENSSSCG00000001855	-	100	78.571	ENSPPYG00000005785	RPS29	100	78.571	Pongo_abelii
ENSSSCG00000001855	-	100	78.571	ENSPCOG00000024671	-	100	78.571	Propithecus_coquereli
ENSSSCG00000001855	-	100	75.000	ENSPCOG00000015576	-	100	75.000	Propithecus_coquereli
ENSSSCG00000001855	-	100	78.571	ENSRNOG00000029443	LOC108352650	100	78.571	Rattus_norvegicus
ENSSSCG00000001855	-	100	78.571	ENSRNOG00000028939	Rps29	100	78.571	Rattus_norvegicus
ENSSSCG00000001855	-	100	78.571	ENSRNOG00000032542	LOC108351482	100	78.571	Rattus_norvegicus
ENSSSCG00000001855	-	100	78.571	ENSRNOG00000004196	LOC108350501	100	78.571	Rattus_norvegicus
ENSSSCG00000001855	-	100	78.571	ENSRBIG00000007567	-	100	78.571	Rhinopithecus_bieti
ENSSSCG00000001855	-	100	78.571	ENSRBIG00000017110	-	100	78.571	Rhinopithecus_bieti
ENSSSCG00000001855	-	100	76.786	ENSRBIG00000011261	-	100	76.786	Rhinopithecus_bieti
ENSSSCG00000001855	-	100	78.571	ENSRBIG00000016462	-	100	78.571	Rhinopithecus_bieti
ENSSSCG00000001855	-	100	76.786	ENSRBIG00000020563	-	100	76.786	Rhinopithecus_bieti
ENSSSCG00000001855	-	100	78.571	ENSRROG00000020854	-	100	78.571	Rhinopithecus_roxellana
ENSSSCG00000001855	-	100	78.571	ENSRROG00000009364	-	100	78.571	Rhinopithecus_roxellana
ENSSSCG00000001855	-	100	78.571	ENSRROG00000011987	-	100	78.571	Rhinopithecus_roxellana
ENSSSCG00000001855	-	100	78.571	ENSRROG00000015879	-	100	78.571	Rhinopithecus_roxellana
ENSSSCG00000001855	-	100	76.786	ENSRROG00000017887	-	100	76.786	Rhinopithecus_roxellana
ENSSSCG00000001855	-	100	78.571	ENSRROG00000037175	-	100	78.571	Rhinopithecus_roxellana
ENSSSCG00000001855	-	100	78.571	ENSRROG00000009633	-	100	78.571	Rhinopithecus_roxellana
ENSSSCG00000001855	-	61	70.588	ENSSBOG00000029046	-	64	70.588	Saimiri_boliviensis_boliviensis
ENSSSCG00000001855	-	100	75.000	ENSSBOG00000009349	-	100	75.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000001855	-	100	78.571	ENSSBOG00000012724	-	100	78.571	Saimiri_boliviensis_boliviensis
ENSSSCG00000001855	-	100	76.786	ENSSBOG00000019207	-	100	76.786	Saimiri_boliviensis_boliviensis
ENSSSCG00000001855	-	98	74.545	ENSSFOG00015000394	-	73	74.545	Scleropages_formosus
ENSSSCG00000001855	-	100	73.214	ENSSDUG00000009578	rps29	63	73.214	Seriola_dumerili
ENSSSCG00000001855	-	91	54.902	ENSUAMG00000005201	-	96	54.902	Ursus_americanus
ENSSSCG00000001855	-	98	76.364	ENSUAMG00000012422	-	54	76.364	Ursus_americanus
ENSSSCG00000001855	-	100	73.214	ENSUAMG00000002506	-	100	73.214	Ursus_americanus
ENSSSCG00000001855	-	100	73.214	ENSUAMG00000003050	-	100	73.214	Ursus_americanus
ENSSSCG00000001855	-	100	78.571	ENSUAMG00000022821	-	100	78.571	Ursus_americanus
ENSSSCG00000001855	-	100	80.357	ENSUAMG00000016993	-	100	80.357	Ursus_americanus
ENSSSCG00000001855	-	98	76.364	ENSUMAG00000007648	-	54	76.364	Ursus_maritimus
ENSSSCG00000001855	-	100	73.214	ENSUMAG00000008130	-	100	73.214	Ursus_maritimus
ENSSSCG00000001855	-	100	71.429	ENSUMAG00000012903	-	100	71.429	Ursus_maritimus
ENSSSCG00000001855	-	100	80.357	ENSUMAG00000019137	-	100	80.357	Ursus_maritimus
ENSSSCG00000001855	-	100	76.786	ENSVVUG00000000785	-	100	76.786	Vulpes_vulpes
ENSSSCG00000001855	-	98	58.182	ENSVVUG00000029871	-	53	58.182	Vulpes_vulpes
ENSSSCG00000001855	-	100	73.214	ENSVVUG00000016811	-	100	73.214	Vulpes_vulpes
ENSSSCG00000001855	-	100	78.571	ENSXETG00000027734	rps29	100	78.571	Xenopus_tropicalis
ENSSSCG00000001855	-	100	73.214	ENSXCOG00000007248	rps29	72	73.214	Xiphophorus_couchianus
ENSSSCG00000001855	-	80	71.111	ENSXMAG00000019760	-	80	71.111	Xiphophorus_maculatus