EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000001877 (Gene tree)
Gene ID: 100157075
Gene Symbol: SNUPN
Alias: RNUT1|SNURPORTIN-1|Snurportin1
Full Name: snurportin 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 42977 bases
Position: chr7:58023418-58066394
Accession: 100157075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000002052	Snurportin1	PF11538.8	2e-17	1	1
ENSSSCP00000002051	Snurportin1	PF11538.8	2.3e-17	1	1
ENSSSCP00000032429	Snurportin1	PF11538.8	2.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000002101	SNUPN-201	2489	-	ENSSSCP00000002051	362 (aa)	-	F1SJ73
ENSSSCT00000002102	SNUPN-202	1317	XM_003128480	ENSSSCP00000002052	336 (aa)	XP_003128528	F1SJ72
ENSSSCT00000038353	SNUPN-203	1823	XM_001929236	ENSSSCP00000032429	362 (aa)	XP_001929271	F1SJ73

Gene Model

Click here to download ENSSSCG00000001877's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000001877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000001877	SNUPN	100	93.370	ENSG00000169371	SNUPN	100	98.413	Homo_sapiens
ENSSSCG00000001877	SNUPN	96	65.928	ENSAPOG00000016953	snupn	95	65.374	Acanthochromis_polyacanthus
ENSSSCG00000001877	SNUPN	100	95.856	ENSAMEG00000008291	SNUPN	99	95.856	Ailuropoda_melanoleuca
ENSSSCG00000001877	SNUPN	95	65.546	ENSACIG00000012409	snupn	94	64.146	Amphilophus_citrinellus
ENSSSCG00000001877	SNUPN	96	65.651	ENSAOCG00000018096	snupn	95	65.097	Amphiprion_ocellaris
ENSSSCG00000001877	SNUPN	96	65.651	ENSAPEG00000008834	snupn	95	64.543	Amphiprion_percula
ENSSSCG00000001877	SNUPN	96	65.097	ENSATEG00000021019	snupn	95	64.820	Anabas_testudineus
ENSSSCG00000001877	SNUPN	100	90.884	ENSANAG00000025568	SNUPN	100	91.436	Aotus_nancymaae
ENSSSCG00000001877	SNUPN	95	63.764	ENSACLG00000025155	snupn	94	64.146	Astatotilapia_calliptera
ENSSSCG00000001877	SNUPN	95	66.197	ENSAMXG00000038311	snupn	96	65.634	Astyanax_mexicanus
ENSSSCG00000001877	SNUPN	100	90.608	ENSBTAG00000021293	SNUPN	100	90.608	Bos_taurus
ENSSSCG00000001877	SNUPN	86	42.357	WBGene00017746	F23F1.5	93	42.357	Caenorhabditis_elegans
ENSSSCG00000001877	SNUPN	100	91.436	ENSCJAG00000003005	SNUPN	100	91.989	Callithrix_jacchus
ENSSSCG00000001877	SNUPN	100	92.541	ENSCAFG00000018035	SNUPN	100	92.541	Canis_familiaris
ENSSSCG00000001877	SNUPN	100	91.436	ENSCHIG00000018047	SNUPN	100	91.436	Capra_hircus
ENSSSCG00000001877	SNUPN	100	88.398	ENSTSYG00000037224	SNUPN	100	88.950	Carlito_syrichta
ENSSSCG00000001877	SNUPN	95	77.151	ENSCAPG00000005061	SNUPN	100	74.930	Cavia_aperea
ENSSSCG00000001877	SNUPN	95	90.698	ENSCPOG00000034772	SNUPN	100	87.845	Cavia_porcellus
ENSSSCG00000001877	SNUPN	100	91.160	ENSCCAG00000016169	-	100	91.713	Cebus_capucinus
ENSSSCG00000001877	SNUPN	100	92.541	ENSCATG00000039783	SNUPN	100	93.094	Cercocebus_atys
ENSSSCG00000001877	SNUPN	95	89.796	ENSCLAG00000016968	SNUPN	100	87.845	Chinchilla_lanigera
ENSSSCG00000001877	SNUPN	100	92.265	ENSCSAG00000014576	-	89	92.818	Chlorocebus_sabaeus
ENSSSCG00000001877	SNUPN	100	90.884	ENSCSAG00000019246	-	100	91.436	Chlorocebus_sabaeus
ENSSSCG00000001877	SNUPN	100	73.204	ENSCHOG00000005403	SNUPN	100	73.204	Choloepus_hoffmanni
ENSSSCG00000001877	SNUPN	100	78.846	ENSCPBG00000022172	SNUPN	95	78.846	Chrysemys_picta_bellii
ENSSSCG00000001877	SNUPN	100	92.265	ENSCANG00000029707	SNUPN	100	92.818	Colobus_angolensis_palliatus
ENSSSCG00000001877	SNUPN	100	91.436	ENSCGRG00001004622	Snupn	100	91.160	Cricetulus_griseus_chok1gshd
ENSSSCG00000001877	SNUPN	100	91.436	ENSCGRG00000002515	Snupn	100	91.160	Cricetulus_griseus_crigri
ENSSSCG00000001877	SNUPN	95	62.570	ENSCSEG00000003160	snupn	84	61.732	Cynoglossus_semilaevis
ENSSSCG00000001877	SNUPN	95	64.225	ENSCVAG00000010502	snupn	94	64.225	Cyprinodon_variegatus
ENSSSCG00000001877	SNUPN	98	63.288	ENSDARG00000008395	snupn	98	63.288	Danio_rerio
ENSSSCG00000001877	SNUPN	100	89.779	ENSDNOG00000044304	SNUPN	94	89.779	Dasypus_novemcinctus
ENSSSCG00000001877	SNUPN	100	92.541	ENSDORG00000009051	Snupn	100	92.541	Dipodomys_ordii
ENSSSCG00000001877	SNUPN	100	74.931	ENSETEG00000013792	SNUPN	100	74.931	Echinops_telfairi
ENSSSCG00000001877	SNUPN	95	54.366	ENSEBUG00000006682	snupn	93	54.085	Eptatretus_burgeri
ENSSSCG00000001877	SNUPN	100	93.370	ENSEASG00005015697	SNUPN	97	93.923	Equus_asinus_asinus
ENSSSCG00000001877	SNUPN	100	93.370	ENSECAG00000017726	SNUPN	100	93.923	Equus_caballus
ENSSSCG00000001877	SNUPN	76	87.574	ENSEEUG00000000981	-	70	88.757	Erinaceus_europaeus
ENSSSCG00000001877	SNUPN	95	65.318	ENSELUG00000023305	snupn	93	65.217	Esox_lucius
ENSSSCG00000001877	SNUPN	100	94.199	ENSFCAG00000040981	SNUPN	100	94.199	Felis_catus
ENSSSCG00000001877	SNUPN	100	88.398	ENSFDAG00000011599	SNUPN	100	87.845	Fukomys_damarensis
ENSSSCG00000001877	SNUPN	96	63.989	ENSFHEG00000017627	snupn	95	63.989	Fundulus_heteroclitus
ENSSSCG00000001877	SNUPN	95	62.817	ENSGMOG00000009272	snupn	100	63.483	Gadus_morhua
ENSSSCG00000001877	SNUPN	95	70.402	ENSGALG00000029537	SNUPN	100	69.126	Gallus_gallus
ENSSSCG00000001877	SNUPN	96	64.903	ENSGAFG00000004954	snupn	95	63.889	Gambusia_affinis
ENSSSCG00000001877	SNUPN	95	66.949	ENSGACG00000007450	snupn	100	65.634	Gasterosteus_aculeatus
ENSSSCG00000001877	SNUPN	98	79.330	ENSGAGG00000022470	SNUPN	97	79.609	Gopherus_agassizii
ENSSSCG00000001877	SNUPN	64	90.683	ENSGGOG00000004581	-	100	90.683	Gorilla_gorilla
ENSSSCG00000001877	SNUPN	95	64.607	ENSHBUG00000006950	snupn	95	63.989	Haplochromis_burtoni
ENSSSCG00000001877	SNUPN	97	88.352	ENSHGLG00000000536	SNUPN	98	88.920	Heterocephalus_glaber_female
ENSSSCG00000001877	SNUPN	97	88.352	ENSHGLG00100016161	SNUPN	98	88.920	Heterocephalus_glaber_male
ENSSSCG00000001877	SNUPN	95	64.543	ENSHCOG00000007262	snupn	95	65.097	Hippocampus_comes
ENSSSCG00000001877	SNUPN	96	63.128	ENSIPUG00000014460	Snupn	97	63.687	Ictalurus_punctatus
ENSSSCG00000001877	SNUPN	100	92.265	ENSSTOG00000005904	SNUPN	100	92.818	Ictidomys_tridecemlineatus
ENSSSCG00000001877	SNUPN	95	64.438	ENSKMAG00000009957	snupn	93	65.350	Kryptolebias_marmoratus
ENSSSCG00000001877	SNUPN	95	64.820	ENSLBEG00000020694	snupn	94	64.641	Labrus_bergylta
ENSSSCG00000001877	SNUPN	95	71.264	ENSLACG00000015801	SNUPN	96	71.552	Latimeria_chalumnae
ENSSSCG00000001877	SNUPN	100	64.865	ENSLOCG00000015064	snupn	100	64.865	Lepisosteus_oculatus
ENSSSCG00000001877	SNUPN	100	94.751	ENSLAFG00000004422	SNUPN	100	94.751	Loxodonta_africana
ENSSSCG00000001877	SNUPN	88	92.821	ENSMFAG00000003706	SNUPN	100	92.821	Macaca_fascicularis
ENSSSCG00000001877	SNUPN	100	92.818	ENSMMUG00000004784	SNUPN	100	93.370	Macaca_mulatta
ENSSSCG00000001877	SNUPN	100	86.188	ENSMLEG00000041966	SNUPN	100	86.188	Mandrillus_leucophaeus
ENSSSCG00000001877	SNUPN	96	66.389	ENSMAMG00000023109	snupn	95	65.374	Mastacembelus_armatus
ENSSSCG00000001877	SNUPN	95	64.045	ENSMZEG00005010806	snupn	94	64.426	Maylandia_zebra
ENSSSCG00000001877	SNUPN	100	91.713	ENSMAUG00000020426	Snupn	100	91.436	Mesocricetus_auratus
ENSSSCG00000001877	SNUPN	100	91.713	ENSMICG00000016438	SNUPN	100	91.436	Microcebus_murinus
ENSSSCG00000001877	SNUPN	100	92.265	ENSMOCG00000014238	Snupn	100	91.436	Microtus_ochrogaster
ENSSSCG00000001877	SNUPN	96	65.000	ENSMMOG00000001321	snupn	95	64.444	Mola_mola
ENSSSCG00000001877	SNUPN	100	83.152	ENSMODG00000008852	SNUPN	100	82.880	Monodelphis_domestica
ENSSSCG00000001877	SNUPN	95	66.006	ENSMALG00000015058	snupn	94	65.439	Monopterus_albus
ENSSSCG00000001877	SNUPN	100	92.541	MGP_CAROLIEiJ_G0032259	Snupn	100	92.541	Mus_caroli
ENSSSCG00000001877	SNUPN	100	92.818	ENSMUSG00000055334	Snupn	100	92.818	Mus_musculus
ENSSSCG00000001877	SNUPN	100	93.370	MGP_PahariEiJ_G0015126	Snupn	100	93.370	Mus_pahari
ENSSSCG00000001877	SNUPN	100	92.818	MGP_SPRETEiJ_G0033399	Snupn	100	92.818	Mus_spretus
ENSSSCG00000001877	SNUPN	100	93.370	ENSMPUG00000017324	SNUPN	100	93.370	Mustela_putorius_furo
ENSSSCG00000001877	SNUPN	100	85.675	ENSMLUG00000027485	-	100	85.399	Myotis_lucifugus
ENSSSCG00000001877	SNUPN	100	90.083	ENSMLUG00000027517	-	100	89.807	Myotis_lucifugus
ENSSSCG00000001877	SNUPN	100	76.152	ENSMLUG00000000038	-	100	76.369	Myotis_lucifugus
ENSSSCG00000001877	SNUPN	100	92.265	ENSNGAG00000018735	Snupn	100	92.265	Nannospalax_galili
ENSSSCG00000001877	SNUPN	95	65.730	ENSNBRG00000017919	snupn	95	64.266	Neolamprologus_brichardi
ENSSSCG00000001877	SNUPN	100	64.560	ENSNLEG00000035240	-	100	64.463	Nomascus_leucogenys
ENSSSCG00000001877	SNUPN	100	74.309	ENSOPRG00000015889	-	100	74.309	Ochotona_princeps
ENSSSCG00000001877	SNUPN	94	74.487	ENSODEG00000014491	SNUPN	100	74.487	Octodon_degus
ENSSSCG00000001877	SNUPN	95	66.011	ENSONIG00000012855	snupn	96	65.266	Oreochromis_niloticus
ENSSSCG00000001877	SNUPN	99	90.000	ENSOCUG00000008801	SNUPN	99	90.556	Oryctolagus_cuniculus
ENSSSCG00000001877	SNUPN	96	65.278	ENSORLG00000001836	snupn	95	65.556	Oryzias_latipes
ENSSSCG00000001877	SNUPN	96	65.651	ENSORLG00020021175	snupn	95	65.556	Oryzias_latipes_hni
ENSSSCG00000001877	SNUPN	96	65.928	ENSORLG00015014444	snupn	94	65.833	Oryzias_latipes_hsok
ENSSSCG00000001877	SNUPN	96	68.376	ENSOMEG00000004853	snupn	95	68.091	Oryzias_melastigma
ENSSSCG00000001877	SNUPN	100	87.879	ENSOGAG00000004915	SNUPN	100	88.430	Otolemur_garnettii
ENSSSCG00000001877	SNUPN	100	91.713	ENSOARG00000001991	SNUPN	97	91.713	Ovis_aries
ENSSSCG00000001877	SNUPN	100	93.370	ENSPPAG00000034351	SNUPN	100	93.094	Pan_paniscus
ENSSSCG00000001877	SNUPN	100	94.475	ENSPPRG00000023192	SNUPN	100	94.475	Panthera_pardus
ENSSSCG00000001877	SNUPN	100	94.475	ENSPTIG00000003528	SNUPN	100	94.475	Panthera_tigris_altaica
ENSSSCG00000001877	SNUPN	100	93.646	ENSPTRG00000007302	SNUPN	100	93.370	Pan_troglodytes
ENSSSCG00000001877	SNUPN	100	82.873	ENSPANG00000034514	SNUPN	100	83.425	Papio_anubis
ENSSSCG00000001877	SNUPN	100	63.085	ENSPKIG00000012444	snupn	100	64.463	Paramormyrops_kingsleyae
ENSSSCG00000001877	SNUPN	100	77.534	ENSPSIG00000015229	SNUPN	100	77.260	Pelodiscus_sinensis
ENSSSCG00000001877	SNUPN	96	63.934	ENSPMGG00000023843	snupn	96	63.934	Periophthalmus_magnuspinnatus
ENSSSCG00000001877	SNUPN	100	83.425	ENSPCIG00000007854	SNUPN	100	83.149	Phascolarctos_cinereus
ENSSSCG00000001877	SNUPN	96	63.966	ENSPFOG00000014221	snupn	94	63.788	Poecilia_formosa
ENSSSCG00000001877	SNUPN	96	64.246	ENSPLAG00000002339	snupn	94	64.067	Poecilia_latipinna
ENSSSCG00000001877	SNUPN	96	63.966	ENSPMEG00000012436	snupn	94	63.788	Poecilia_mexicana
ENSSSCG00000001877	SNUPN	96	63.966	ENSPREG00000012683	snupn	94	64.067	Poecilia_reticulata
ENSSSCG00000001877	SNUPN	100	83.425	ENSPPYG00000006663	SNUPN	100	83.149	Pongo_abelii
ENSSSCG00000001877	SNUPN	100	91.989	ENSPCOG00000025482	SNUPN	100	92.265	Propithecus_coquereli
ENSSSCG00000001877	SNUPN	100	91.713	ENSPVAG00000010035	SNUPN	100	91.160	Pteropus_vampyrus
ENSSSCG00000001877	SNUPN	95	64.607	ENSPNYG00000008752	snupn	95	63.989	Pundamilia_nyererei
ENSSSCG00000001877	SNUPN	95	66.856	ENSPNAG00000026875	snupn	96	65.722	Pygocentrus_nattereri
ENSSSCG00000001877	SNUPN	100	92.265	ENSRNOG00000005426	Snupn	100	92.265	Rattus_norvegicus
ENSSSCG00000001877	SNUPN	100	92.265	ENSRBIG00000038665	SNUPN	100	92.818	Rhinopithecus_bieti
ENSSSCG00000001877	SNUPN	100	92.541	ENSRROG00000043625	SNUPN	100	93.094	Rhinopithecus_roxellana
ENSSSCG00000001877	SNUPN	100	90.331	ENSSBOG00000029086	-	100	90.884	Saimiri_boliviensis_boliviensis
ENSSSCG00000001877	SNUPN	88	70.807	ENSSFOG00015022264	snupn	66	70.497	Scleropages_formosus
ENSSSCG00000001877	SNUPN	96	68.481	ENSSMAG00000005485	snupn	95	68.481	Scophthalmus_maximus
ENSSSCG00000001877	SNUPN	96	66.667	ENSSDUG00000023461	snupn	95	65.374	Seriola_dumerili
ENSSSCG00000001877	SNUPN	96	66.852	ENSSLDG00000001425	snupn	95	65.833	Seriola_lalandi_dorsalis
ENSSSCG00000001877	SNUPN	90	89.349	ENSSARG00000005585	SNUPN	84	90.533	Sorex_araneus
ENSSSCG00000001877	SNUPN	99	74.865	ENSSPUG00000014331	SNUPN	99	74.865	Sphenodon_punctatus
ENSSSCG00000001877	SNUPN	95	66.292	ENSSPAG00000001216	snupn	94	65.266	Stegastes_partitus
ENSSSCG00000001877	SNUPN	95	65.730	ENSTRUG00000016085	snupn	92	65.266	Takifugu_rubripes
ENSSSCG00000001877	SNUPN	94	57.429	ENSTNIG00000008456	snupn	100	57.955	Tetraodon_nigroviridis
ENSSSCG00000001877	SNUPN	100	87.845	ENSTBEG00000002434	SNUPN	100	87.293	Tupaia_belangeri
ENSSSCG00000001877	SNUPN	100	86.740	ENSTTRG00000011484	SNUPN	100	86.740	Tursiops_truncatus
ENSSSCG00000001877	SNUPN	100	95.856	ENSUAMG00000022723	SNUPN	100	95.856	Ursus_americanus
ENSSSCG00000001877	SNUPN	100	95.580	ENSUMAG00000003738	SNUPN	100	95.580	Ursus_maritimus
ENSSSCG00000001877	SNUPN	100	92.541	ENSVVUG00000019574	SNUPN	100	92.541	Vulpes_vulpes
ENSSSCG00000001877	SNUPN	95	67.908	ENSXETG00000015280	snupn	99	67.622	Xenopus_tropicalis
ENSSSCG00000001877	SNUPN	96	64.525	ENSXMAG00000006634	snupn	95	64.345	Xiphophorus_maculatus