EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000002266 (Gene tree)
Gene ID: 100156869
Gene Symbol: -
Alias: DKFZp547I1315|DKFZp686E01200|DKFZp781D1727|FLJ38614
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 127013 bases
Position: chr7:85980766-86107778
Accession: 100156869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000042992	ResIII	PF04851.15	1.4e-09	1	1
ENSSSCP00000039672	ResIII	PF04851.15	7.4e-08	1	1
ENSSSCP00000026530	ResIII	PF04851.15	7.7e-08	1	1
ENSSSCP00000026791	ResIII	PF04851.15	8.3e-08	1	1
ENSSSCP00000040760	ResIII	PF04851.15	8.3e-08	1	1
ENSSSCP00000002461	ResIII	PF04851.15	8.5e-08	1	1
ENSSSCP00000038818	ResIII	PF04851.15	8.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000037867	-	6495	XM_021099370	ENSSSCP00000040760	1730 (aa)	XP_020955029	A0A287A9T0
ENSSSCT00000025402	-	5502	-	ENSSSCP00000026530	1640 (aa)	-	I3LQZ8
ENSSSCT00000027293	-	5264	-	ENSSSCP00000026791	1730 (aa)	-	I3LRQ2
ENSSSCT00000002524	-	5336	-	ENSSSCP00000002461	1754 (aa)	-	F1SA77
ENSSSCT00000061746	-	8097	-	ENSSSCP00000039672	1581 (aa)	-	A0A287A721
ENSSSCT00000043688	-	6594	XM_001926358	ENSSSCP00000038818	1828 (aa)	XP_001926393	A0A287A4M4
ENSSSCT00000047171	-	6453	-	ENSSSCP00000042992	1781 (aa)	-	A0A287AGK7
ENSSSCT00000063923	-	2835	-	ENSSSCP00000038136	551 (aa)	-	A0A287A2H3

Gene Model

Click here to download ENSSSCG00000002266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000002266's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000002266	-	80	68.392	ENSSSCG00000014177	CHD1	95	64.718

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000002266	-	100	98.687	ENSG00000173575	CHD2	100	98.802	Homo_sapiens
ENSSSCG00000002266	-	100	75.063	ENSAPOG00000008913	chd2	100	72.273	Acanthochromis_polyacanthus
ENSSSCG00000002266	-	70	99.479	ENSAMEG00000010805	-	100	99.479	Ailuropoda_melanoleuca
ENSSSCG00000002266	-	100	72.802	ENSAOCG00000016332	chd2	100	70.105	Amphiprion_ocellaris
ENSSSCG00000002266	-	100	74.874	ENSAPEG00000016676	chd2	100	72.165	Amphiprion_percula
ENSSSCG00000002266	-	100	74.812	ENSATEG00000005246	chd2	100	71.888	Anabas_testudineus
ENSSSCG00000002266	-	100	89.723	ENSAPLG00000011141	-	100	88.322	Anas_platyrhynchos
ENSSSCG00000002266	-	100	81.812	ENSACAG00000000088	-	99	80.379	Anolis_carolinensis
ENSSSCG00000002266	-	100	98.545	ENSANAG00000024017	-	100	98.468	Aotus_nancymaae
ENSSSCG00000002266	-	96	70.139	ENSACLG00000021370	chd2	93	71.163	Astatotilapia_calliptera
ENSSSCG00000002266	-	53	97.359	ENSBTAG00000017776	CHD2	99	97.403	Bos_taurus
ENSSSCG00000002266	-	100	98.249	ENSCJAG00000020444	-	100	98.249	Callithrix_jacchus
ENSSSCG00000002266	-	100	99.051	ENSCAFG00000010998	CHD2	100	99.130	Canis_familiaris
ENSSSCG00000002266	-	100	96.901	ENSCHIG00000022261	-	99	96.266	Capra_hircus
ENSSSCG00000002266	-	100	98.742	ENSTSYG00000003272	-	100	98.742	Carlito_syrichta
ENSSSCG00000002266	-	93	97.574	ENSCPOG00000005800	-	100	97.440	Cavia_porcellus
ENSSSCG00000002266	-	100	98.545	ENSCCAG00000035304	-	100	98.468	Cebus_capucinus
ENSSSCG00000002266	-	100	98.687	ENSCATG00000031069	-	100	98.687	Cercocebus_atys
ENSSSCG00000002266	-	100	97.913	ENSCLAG00000016269	-	100	97.702	Chinchilla_lanigera
ENSSSCG00000002266	-	100	98.742	ENSCSAG00000017007	-	100	98.742	Chlorocebus_sabaeus
ENSSSCG00000002266	-	83	99.091	ENSCHOG00000000608	-	82	99.091	Choloepus_hoffmanni
ENSSSCG00000002266	-	93	87.263	ENSCPBG00000018049	-	94	94.915	Chrysemys_picta_bellii
ENSSSCG00000002266	-	82	54.676	ENSCSAVG00000007580	-	93	60.733	Ciona_savignyi
ENSSSCG00000002266	-	100	98.632	ENSCANG00000038126	-	100	98.632	Colobus_angolensis_palliatus
ENSSSCG00000002266	-	100	96.991	ENSCGRG00001006649	Chd2	100	96.991	Cricetulus_griseus_chok1gshd
ENSSSCG00000002266	-	100	96.991	ENSCGRG00000018154	Chd2	100	96.991	Cricetulus_griseus_crigri
ENSSSCG00000002266	-	95	88.462	ENSCSEG00000003646	chd2	89	88.462	Cynoglossus_semilaevis
ENSSSCG00000002266	-	100	66.394	ENSCVAG00000002427	chd2	89	83.200	Cyprinodon_variegatus
ENSSSCG00000002266	-	99	72.028	ENSDARG00000060687	chd2	100	72.005	Danio_rerio
ENSSSCG00000002266	-	100	98.040	ENSDNOG00000009796	-	100	97.976	Dasypus_novemcinctus
ENSSSCG00000002266	-	55	74.468	ENSEBUG00000014994	chd2	83	74.468	Eptatretus_burgeri
ENSSSCG00000002266	-	100	99.304	ENSEASG00005015526	-	99	100.000	Equus_asinus_asinus
ENSSSCG00000002266	-	99	74.214	ENSELUG00000017981	chd2	100	71.030	Esox_lucius
ENSSSCG00000002266	-	100	91.104	ENSFALG00000010369	-	100	89.396	Ficedula_albicollis
ENSSSCG00000002266	-	100	97.746	ENSFDAG00000020651	-	100	97.648	Fukomys_damarensis
ENSSSCG00000002266	-	100	71.482	ENSFHEG00000002119	chd2	91	71.692	Fundulus_heteroclitus
ENSSSCG00000002266	-	99	70.055	ENSGMOG00000002890	chd2	99	70.802	Gadus_morhua
ENSSSCG00000002266	-	100	90.365	ENSGALG00000006949	CHD2	100	88.551	Gallus_gallus
ENSSSCG00000002266	-	100	73.463	ENSGAFG00000001905	chd2	97	69.956	Gambusia_affinis
ENSSSCG00000002266	-	94	73.494	ENSGACG00000013246	chd2	99	70.440	Gasterosteus_aculeatus
ENSSSCG00000002266	-	92	90.284	ENSGAGG00000013176	-	98	92.115	Gopherus_agassizii
ENSSSCG00000002266	-	100	97.265	ENSGGOG00000015677	CHD2	100	97.265	Gorilla_gorilla
ENSSSCG00000002266	-	100	74.623	ENSHBUG00000017947	chd2	92	88.462	Haplochromis_burtoni
ENSSSCG00000002266	-	100	97.533	ENSHGLG00000004435	CHD2	100	97.429	Heterocephalus_glaber_female
ENSSSCG00000002266	-	100	96.774	ENSHGLG00100016376	-	100	96.772	Heterocephalus_glaber_male
ENSSSCG00000002266	-	100	70.901	ENSHCOG00000008855	chd2	89	70.386	Hippocampus_comes
ENSSSCG00000002266	-	98	69.460	ENSIPUG00000000488	chd2	100	69.287	Ictalurus_punctatus
ENSSSCG00000002266	-	100	98.861	ENSSTOG00000001270	-	100	98.742	Ictidomys_tridecemlineatus
ENSSSCG00000002266	-	100	97.280	ENSJJAG00000000213	Chd2	100	96.937	Jaculus_jaculus
ENSSSCG00000002266	-	97	72.409	ENSKMAG00000015849	chd2	99	73.251	Kryptolebias_marmoratus
ENSSSCG00000002266	-	84	97.825	ENSLAFG00000016885	-	100	97.825	Loxodonta_africana
ENSSSCG00000002266	-	100	98.687	ENSMFAG00000033343	-	100	98.687	Macaca_fascicularis
ENSSSCG00000002266	-	100	98.687	ENSMMUG00000011782	-	100	98.687	Macaca_mulatta
ENSSSCG00000002266	-	100	98.306	ENSMNEG00000036875	-	100	98.306	Macaca_nemestrina
ENSSSCG00000002266	-	100	98.742	ENSMLEG00000035026	-	100	98.742	Mandrillus_leucophaeus
ENSSSCG00000002266	-	100	74.529	ENSMAMG00000009082	chd2	100	71.229	Mastacembelus_armatus
ENSSSCG00000002266	-	96	70.139	ENSMZEG00005021333	chd2	93	71.163	Maylandia_zebra
ENSSSCG00000002266	-	100	90.245	ENSMGAG00000008966	-	99	88.485	Meleagris_gallopavo
ENSSSCG00000002266	-	100	97.977	ENSMICG00000000332	-	100	97.101	Microcebus_murinus
ENSSSCG00000002266	-	100	96.966	ENSMOCG00000015124	Chd2	100	96.884	Microtus_ochrogaster
ENSSSCG00000002266	-	100	93.872	ENSMODG00000013158	-	100	92.927	Monodelphis_domestica
ENSSSCG00000002266	-	100	74.623	ENSMALG00000007755	chd2	94	73.210	Monopterus_albus
ENSSSCG00000002266	-	100	96.648	MGP_CAROLIEiJ_G0029860	Chd2	100	96.499	Mus_caroli
ENSSSCG00000002266	-	100	96.395	ENSMUSG00000078671	Chd2	100	96.225	Mus_musculus
ENSSSCG00000002266	-	100	96.587	MGP_PahariEiJ_G0013082	Chd2	100	96.501	Mus_pahari
ENSSSCG00000002266	-	100	96.458	MGP_SPRETEiJ_G0030962	Chd2	100	96.335	Mus_spretus
ENSSSCG00000002266	-	100	99.070	ENSMPUG00000017577	-	100	99.070	Mustela_putorius_furo
ENSSSCG00000002266	-	100	96.740	ENSMLUG00000009292	-	100	95.765	Myotis_lucifugus
ENSSSCG00000002266	-	100	97.913	ENSNGAG00000010792	Chd2	100	97.812	Nannospalax_galili
ENSSSCG00000002266	-	100	74.859	ENSNBRG00000020591	chd2	90	75.062	Neolamprologus_brichardi
ENSSSCG00000002266	-	100	96.061	ENSNLEG00000012349	-	100	96.061	Nomascus_leucogenys
ENSSSCG00000002266	-	76	91.866	ENSMEUG00000001522	-	77	89.591	Notamacropus_eugenii
ENSSSCG00000002266	-	100	96.837	ENSODEG00000016028	-	100	96.499	Octodon_degus
ENSSSCG00000002266	-	100	74.262	ENSONIG00000015136	chd2	100	72.037	Oreochromis_niloticus
ENSSSCG00000002266	-	100	82.988	ENSOANG00000004385	-	100	85.350	Ornithorhynchus_anatinus
ENSSSCG00000002266	-	100	89.094	ENSOCUG00000001628	-	99	98.155	Oryctolagus_cuniculus
ENSSSCG00000002266	-	100	73.681	ENSORLG00000008403	chd2	100	70.700	Oryzias_latipes
ENSSSCG00000002266	-	100	73.807	ENSORLG00020004138	chd2	100	70.914	Oryzias_latipes_hni
ENSSSCG00000002266	-	100	66.855	ENSOMEG00000005831	chd2	100	67.003	Oryzias_melastigma
ENSSSCG00000002266	-	100	96.335	ENSOGAG00000010399	-	100	96.335	Otolemur_garnettii
ENSSSCG00000002266	-	100	98.419	ENSOARG00000010343	-	100	96.608	Ovis_aries
ENSSSCG00000002266	-	100	97.977	ENSPPAG00000030381	-	100	97.652	Pan_paniscus
ENSSSCG00000002266	-	100	98.742	ENSPTRG00000007478	CHD2	100	98.742	Pan_troglodytes
ENSSSCG00000002266	-	100	95.788	ENSPANG00000033355	-	100	95.788	Papio_anubis
ENSSSCG00000002266	-	100	74.874	ENSPKIG00000000495	chd2	100	71.590	Paramormyrops_kingsleyae
ENSSSCG00000002266	-	97	70.083	ENSPMGG00000009941	chd2	99	70.596	Periophthalmus_magnuspinnatus
ENSSSCG00000002266	-	100	97.090	ENSPEMG00000019507	Chd2	100	96.991	Peromyscus_maniculatus_bairdii
ENSSSCG00000002266	-	100	94.125	ENSPCIG00000009417	-	100	93.574	Phascolarctos_cinereus
ENSSSCG00000002266	-	100	74.859	ENSPFOG00000007050	chd2	100	72.243	Poecilia_formosa
ENSSSCG00000002266	-	100	74.984	ENSPLAG00000005067	chd2	100	72.419	Poecilia_latipinna
ENSSSCG00000002266	-	100	74.796	ENSPMEG00000019628	chd2	100	72.189	Poecilia_mexicana
ENSSSCG00000002266	-	100	97.429	ENSPPYG00000006799	-	100	97.429	Pongo_abelii
ENSSSCG00000002266	-	100	98.925	ENSPCOG00000028084	-	100	98.906	Propithecus_coquereli
ENSSSCG00000002266	-	96	70.180	ENSPNYG00000010273	chd2	92	88.462	Pundamilia_nyererei
ENSSSCG00000002266	-	95	70.029	ENSPNAG00000016719	chd2	99	69.448	Pygocentrus_nattereri
ENSSSCG00000002266	-	100	96.521	ENSRNOG00000012716	Chd2	100	96.389	Rattus_norvegicus
ENSSSCG00000002266	-	100	96.501	ENSRBIG00000036875	-	100	96.501	Rhinopithecus_bieti
ENSSSCG00000002266	-	100	98.523	ENSRROG00000041087	-	100	98.523	Rhinopithecus_roxellana
ENSSSCG00000002266	-	100	98.632	ENSSBOG00000023754	-	100	98.632	Saimiri_boliviensis_boliviensis
ENSSSCG00000002266	-	100	94.062	ENSSHAG00000012513	-	100	93.145	Sarcophilus_harrisii
ENSSSCG00000002266	-	100	76.065	ENSSFOG00015023759	chd2	100	73.168	Scleropages_formosus
ENSSSCG00000002266	-	100	73.542	ENSSMAG00000001726	chd2	100	70.364	Scophthalmus_maximus
ENSSSCG00000002266	-	100	73.807	ENSSLDG00000001146	chd2	100	70.734	Seriola_lalandi_dorsalis
ENSSSCG00000002266	-	81	98.333	ENSSARG00000014112	-	82	98.333	Sorex_araneus
ENSSSCG00000002266	-	100	86.742	ENSSPUG00000011266	-	99	84.228	Sphenodon_punctatus
ENSSSCG00000002266	-	100	74.670	ENSSPAG00000016452	chd2	95	73.486	Stegastes_partitus
ENSSSCG00000002266	-	100	91.230	ENSTGUG00000008540	-	100	89.204	Taeniopygia_guttata
ENSSSCG00000002266	-	93	68.908	ENSTRUG00000008842	chd2	87	68.571	Takifugu_rubripes
ENSSSCG00000002266	-	86	77.869	ENSTNIG00000010760	chd2	97	72.932	Tetraodon_nigroviridis
ENSSSCG00000002266	-	86	97.797	ENSTBEG00000017730	-	83	97.797	Tupaia_belangeri
ENSSSCG00000002266	-	95	100.000	ENSTTRG00000000430	-	95	100.000	Tursiops_truncatus
ENSSSCG00000002266	-	100	98.989	ENSUMAG00000000083	-	100	98.989	Ursus_maritimus
ENSSSCG00000002266	-	84	100.000	ENSVPAG00000009645	-	86	98.556	Vicugna_pacos
ENSSSCG00000002266	-	100	73.801	ENSXETG00000024129	chd2	95	81.036	Xenopus_tropicalis
ENSSSCG00000002266	-	100	72.995	ENSXCOG00000020255	chd2	99	69.604	Xiphophorus_couchianus
ENSSSCG00000002266	-	100	74.937	ENSXMAG00000002707	chd2	100	72.234	Xiphophorus_maculatus