EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSSCG00000002704 (Gene tree)
Gene ID
100521452
Gene Symbol
KARS
Alias
DFNB89|KARS1|KARS2
Full Name
lysyl-tRNA synthetase
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
20485 bases
Position
chr6:12056567-12077051
Accession
100521452
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000038385tRNA_anti-codonPF01336.258e-1511
ENSSSCP00000044540tRNA_anti-codonPF01336.258e-1511
ENSSSCP00000002919tRNA_anti-codonPF01336.259e-1511
ENSSSCP00000053068tRNA_anti-codonPF01336.259e-1511
ENSSSCP00000038385tRNA-synt_2PF00152.202.1e-8011
ENSSSCP00000044540tRNA-synt_2PF00152.202.1e-8011
ENSSSCP00000002919tRNA-synt_2PF00152.202.4e-8011
ENSSSCP00000053068tRNA-synt_2PF00152.202.4e-8011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000038985KARS-2045394-ENSSSCP00000053068625 (aa)-F1S458
ENSSSCT00000061127KARS-2035276-ENSSSCP00000044540597 (aa)-A0A287AKI9
ENSSSCT00000041141KARS-2012833XM_003126856ENSSSCP00000038385597 (aa)XP_003126904A0A287AKI9
ENSSSCT00000002998KARS-2022199XM_003355743ENSSSCP00000002919625 (aa)XP_003355791F1S458
Gene Model
Click here to download ENSSSCG00000002704's gene model file
Pathways
Pathway IDPathway NameSource
ssc00970Aminoacyl-tRNA biosynthesisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000002704's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000002704KARS10094.807ENSG00000065427KARS10097.059Homo_sapiens
ENSSSCG00000002704KARS9480.639ENSAPOG00000010997kars9680.639Acanthochromis_polyacanthus
ENSSSCG00000002704KARS10093.280ENSAMEG00000005347KARS10093.280Ailuropoda_melanoleuca
ENSSSCG00000002704KARS9874.118ENSACIG00000000304kars9975.212Amphilophus_citrinellus
ENSSSCG00000002704KARS9481.932ENSAOCG00000012971kars9780.496Amphiprion_ocellaris
ENSSSCG00000002704KARS9681.010ENSAPEG00000011144kars9881.010Amphiprion_percula
ENSSSCG00000002704KARS9879.188ENSATEG00000004954kars9978.947Anabas_testudineus
ENSSSCG00000002704KARS9184.104ENSAPLG00000012705KARS9784.572Anas_platyrhynchos
ENSSSCG00000002704KARS9681.391ENSACAG00000007577KARS9081.391Anolis_carolinensis
ENSSSCG00000002704KARS9979.630ENSANAG00000031739-9978.224Aotus_nancymaae
ENSSSCG00000002704KARS10094.472ENSANAG00000030403-10094.472Aotus_nancymaae
ENSSSCG00000002704KARS9780.274ENSACLG00000001613kars9880.000Astatotilapia_calliptera
ENSSSCG00000002704KARS9879.795ENSAMXG00000030719kars9980.069Astyanax_mexicanus
ENSSSCG00000002704KARS10095.310ENSBTAG00000015677KARS7794.640Bos_taurus
ENSSSCG00000002704KARS9759.585WBGene00002238kars-110063.107Caenorhabditis_elegans
ENSSSCG00000002704KARS10094.305ENSCJAG00000014213KARS10094.305Callithrix_jacchus
ENSSSCG00000002704KARS10093.440ENSCAFG00000020069KARS10093.440Canis_familiaris
ENSSSCG00000002704KARS10093.467ENSCAFG00020001721KARS10093.467Canis_lupus_dingo
ENSSSCG00000002704KARS9694.261ENSCHIG00000016073-9593.391Capra_hircus
ENSSSCG00000002704KARS10096.160ENSCHIG00000014108-10095.360Capra_hircus
ENSSSCG00000002704KARS10093.760ENSTSYG00000001643KARS10093.440Carlito_syrichta
ENSSSCG00000002704KARS10088.000ENSCAPG00000016234KARS10087.040Cavia_aperea
ENSSSCG00000002704KARS10094.975ENSCPOG00000012036KARS10093.970Cavia_porcellus
ENSSSCG00000002704KARS10094.975ENSCCAG00000034307-10094.975Cebus_capucinus
ENSSSCG00000002704KARS9278.062ENSCCAG00000030337-9978.062Cebus_capucinus
ENSSSCG00000002704KARS9994.585ENSCATG00000038129KARS9993.710Cercocebus_atys
ENSSSCG00000002704KARS10093.600ENSCLAG00000007905KARS10093.600Chinchilla_lanigera
ENSSSCG00000002704KARS10093.280ENSCSAG00000003664KARS10093.280Chlorocebus_sabaeus
ENSSSCG00000002704KARS8294.647ENSCHOG00000013447KARS8294.647Choloepus_hoffmanni
ENSSSCG00000002704KARS8871.917ENSCPBG00000002553-9472.832Chrysemys_picta_bellii
ENSSSCG00000002704KARS9785.320ENSCPBG00000026969KARS9984.095Chrysemys_picta_bellii
ENSSSCG00000002704KARS9568.254ENSCING00000009513-9768.246Ciona_intestinalis
ENSSSCG00000002704KARS5370.440ENSCSAVG00000001136-9674.800Ciona_savignyi
ENSSSCG00000002704KARS9568.607ENSCSAVG00000007684-10066.149Ciona_savignyi
ENSSSCG00000002704KARS10089.615ENSCANG00000032813KARS10089.615Colobus_angolensis_palliatus
ENSSSCG00000002704KARS10092.971ENSCGRG00001004055KARS10092.492Cricetulus_griseus_chok1gshd
ENSSSCG00000002704KARS10092.971ENSCGRG00000014242KARS10092.492Cricetulus_griseus_crigri
ENSSSCG00000002704KARS9781.002ENSCSEG00000008324kars9880.656Cynoglossus_semilaevis
ENSSSCG00000002704KARS9680.139ENSCVAG00000019686kars9880.139Cyprinodon_variegatus
ENSSSCG00000002704KARS9782.180ENSDARG00000103799kars9985.603Danio_rerio
ENSSSCG00000002704KARS10094.560ENSDNOG00000002241KARS10094.560Dasypus_novemcinctus
ENSSSCG00000002704KARS10071.022ENSDORG00000024214-10071.022Dipodomys_ordii
ENSSSCG00000002704KARS10093.635ENSDORG00000004780-10093.635Dipodomys_ordii
ENSSSCG00000002704KARS9669.896FBgn0027084LysRS9969.896Drosophila_melanogaster
ENSSSCG00000002704KARS10091.214ENSETEG00000008353KARS10091.214Echinops_telfairi
ENSSSCG00000002704KARS9671.157ENSEBUG00000001284-9871.157Eptatretus_burgeri
ENSSSCG00000002704KARS10094.992ENSEASG00005013497KARS10094.157Equus_asinus_asinus
ENSSSCG00000002704KARS10094.992ENSECAG00000013424KARS10094.157Equus_caballus
ENSSSCG00000002704KARS9786.700ENSEEUG00000007042KARS10085.120Erinaceus_europaeus
ENSSSCG00000002704KARS9871.307ENSELUG00000014575kars9870.918Esox_lucius
ENSSSCG00000002704KARS9796.223ENSFCAG00000008573KARS10095.200Felis_catus
ENSSSCG00000002704KARS10081.198ENSFALG00000002543KARS10081.032Ficedula_albicollis
ENSSSCG00000002704KARS10094.305ENSFDAG00000007155KARS10094.305Fukomys_damarensis
ENSSSCG00000002704KARS9877.891ENSFHEG00000006172kars9977.931Fundulus_heteroclitus
ENSSSCG00000002704KARS9478.686ENSGMOG00000002633kars9874.257Gadus_morhua
ENSSSCG00000002704KARS10082.580ENSGALG00000000907KARS9983.882Gallus_gallus
ENSSSCG00000002704KARS9779.725ENSGAFG00000017252kars9979.725Gambusia_affinis
ENSSSCG00000002704KARS9777.969ENSGACG00000015749kars9777.969Gasterosteus_aculeatus
ENSSSCG00000002704KARS9785.294ENSGAGG00000023836KARS9785.121Gopherus_agassizii
ENSSSCG00000002704KARS9070.896ENSGAGG00000011960-9573.861Gopherus_agassizii
ENSSSCG00000002704KARS10094.472ENSGGOG00000005515KARS10094.472Gorilla_gorilla
ENSSSCG00000002704KARS9780.274ENSHBUG00000013619kars9880.000Haplochromis_burtoni
ENSSSCG00000002704KARS9976.578ENSHGLG00000001298-9976.578Heterocephalus_glaber_female
ENSSSCG00000002704KARS10093.467ENSHGLG00000011898KARS10093.761Heterocephalus_glaber_female
ENSSSCG00000002704KARS10083.417ENSHGLG00000015235-10083.417Heterocephalus_glaber_female
ENSSSCG00000002704KARS10093.467ENSHGLG00100012264KARS10093.467Heterocephalus_glaber_male
ENSSSCG00000002704KARS9976.412ENSHGLG00100006466-9976.412Heterocephalus_glaber_male
ENSSSCG00000002704KARS10083.250ENSHGLG00100012523-10083.250Heterocephalus_glaber_male
ENSSSCG00000002704KARS9879.422ENSHCOG00000002900kars9678.752Hippocampus_comes
ENSSSCG00000002704KARS9779.553ENSIPUG00000009862kars9979.553Ictalurus_punctatus
ENSSSCG00000002704KARS10093.970ENSSTOG00000004205KARS10093.970Ictidomys_tridecemlineatus
ENSSSCG00000002704KARS10092.640ENSJJAG00000020406Kars10092.640Jaculus_jaculus
ENSSSCG00000002704KARS9780.623ENSKMAG00000006434kars9980.623Kryptolebias_marmoratus
ENSSSCG00000002704KARS10078.559ENSLBEG00000026537kars9975.974Labrus_bergylta
ENSSSCG00000002704KARS10079.233ENSLACG00000006667KARS10079.872Latimeria_chalumnae
ENSSSCG00000002704KARS8574.704ENSLACG00000016399-9974.704Latimeria_chalumnae
ENSSSCG00000002704KARS9880.479ENSLOCG00000004002kars9980.479Lepisosteus_oculatus
ENSSSCG00000002704KARS9168.934ENSLOCG00000013608-9769.925Lepisosteus_oculatus
ENSSSCG00000002704KARS10092.800ENSLAFG00000015340KARS10092.800Loxodonta_africana
ENSSSCG00000002704KARS10093.970ENSMFAG00000040024KARS10093.970Macaca_fascicularis
ENSSSCG00000002704KARS8692.621ENSMNEG00000035832-9992.621Macaca_nemestrina
ENSSSCG00000002704KARS10093.970ENSMNEG00000042879-10093.970Macaca_nemestrina
ENSSSCG00000002704KARS10094.137ENSMLEG00000034947KARS10094.137Mandrillus_leucophaeus
ENSSSCG00000002704KARS9878.731ENSMAMG00000021559kars9578.731Mastacembelus_armatus
ENSSSCG00000002704KARS9780.274ENSMZEG00005014382kars9880.000Maylandia_zebra
ENSSSCG00000002704KARS9583.186ENSMGAG00000009000KARS10083.186Meleagris_gallopavo
ENSSSCG00000002704KARS10092.965ENSMICG00000011997KARS10092.965Microcebus_murinus
ENSSSCG00000002704KARS9993.750ENSMOCG00000011829Kars9992.905Microtus_ochrogaster
ENSSSCG00000002704KARS10090.285ENSMOCG00000019029-10089.447Microtus_ochrogaster
ENSSSCG00000002704KARS9580.952ENSMMOG00000016934kars9980.776Mola_mola
ENSSSCG00000002704KARS9688.462ENSMODG00000002215-9988.112Monodelphis_domestica
ENSSSCG00000002704KARS9981.129ENSMODG00000002238-9980.323Monodelphis_domestica
ENSSSCG00000002704KARS9779.965ENSMALG00000020858kars9879.965Monopterus_albus
ENSSSCG00000002704KARS8687.371MGP_CAROLIEiJ_G0031588Kars10089.125Mus_caroli
ENSSSCG00000002704KARS10091.680ENSMUSG00000031948Kars10091.040Mus_musculus
ENSSSCG00000002704KARS10091.960MGP_PahariEiJ_G0023186Kars10091.290Mus_pahari
ENSSSCG00000002704KARS10091.680MGP_SPRETEiJ_G0032706Kars10091.040Mus_spretus
ENSSSCG00000002704KARS10094.560ENSMPUG00000009871KARS10094.560Mustela_putorius_furo
ENSSSCG00000002704KARS8058.901ENSMLUG00000026871-9857.506Myotis_lucifugus
ENSSSCG00000002704KARS10094.137ENSMLUG00000015119-10094.137Myotis_lucifugus
ENSSSCG00000002704KARS9593.628ENSNGAG00000022944-9692.743Nannospalax_galili
ENSSSCG00000002704KARS10093.802ENSNGAG00000018820-10092.965Nannospalax_galili
ENSSSCG00000002704KARS9780.103ENSNBRG00000011098kars9879.760Neolamprologus_brichardi
ENSSSCG00000002704KARS10094.472ENSNLEG00000013072KARS10094.472Nomascus_leucogenys
ENSSSCG00000002704KARS9783.690ENSMEUG00000008684KARS9883.196Notamacropus_eugenii
ENSSSCG00000002704KARS9892.484ENSOPRG00000012544KARS10092.484Ochotona_princeps
ENSSSCG00000002704KARS10092.797ENSODEG00000013099-10092.797Octodon_degus
ENSSSCG00000002704KARS9767.586ENSODEG00000009464-10067.069Octodon_degus
ENSSSCG00000002704KARS9780.274ENSONIG00000005937kars9980.171Oreochromis_niloticus
ENSSSCG00000002704KARS9689.236ENSOANG00000008179KARS9788.715Ornithorhynchus_anatinus
ENSSSCG00000002704KARS10086.265ENSOCUG00000015553KARS10086.935Oryctolagus_cuniculus
ENSSSCG00000002704KARS9581.305ENSORLG00000007627kars9877.851Oryzias_latipes
ENSSSCG00000002704KARS9581.129ENSORLG00020010056kars9877.686Oryzias_latipes_hni
ENSSSCG00000002704KARS9580.952ENSORLG00015008179kars9877.521Oryzias_latipes_hsok
ENSSSCG00000002704KARS9780.138ENSOMEG00000001710kars9880.138Oryzias_melastigma
ENSSSCG00000002704KARS10087.360ENSOGAG00000005903KARS10087.360Otolemur_garnettii
ENSSSCG00000002704KARS9295.636ENSOARG00000006928KARS9694.727Ovis_aries
ENSSSCG00000002704KARS10094.472ENSPPAG00000036192KARS10094.472Pan_paniscus
ENSSSCG00000002704KARS10094.975ENSPPRG00000003027KARS10094.975Panthera_pardus
ENSSSCG00000002704KARS10095.142ENSPTIG00000008011KARS10095.142Panthera_tigris_altaica
ENSSSCG00000002704KARS10094.640ENSPTRG00000008364KARS10094.640Pan_troglodytes
ENSSSCG00000002704KARS10094.305ENSPANG00000024106KARS10093.600Papio_anubis
ENSSSCG00000002704KARS9776.701ENSPKIG00000009896kars9978.866Paramormyrops_kingsleyae
ENSSSCG00000002704KARS9485.868ENSPSIG00000009294KARS9685.689Pelodiscus_sinensis
ENSSSCG00000002704KARS8773.372ENSPSIG00000003041-9573.654Pelodiscus_sinensis
ENSSSCG00000002704KARS8783.142ENSPMGG00000006117kars9980.035Periophthalmus_magnuspinnatus
ENSSSCG00000002704KARS10093.120ENSPEMG00000012277Kars10093.120Peromyscus_maniculatus_bairdii
ENSSSCG00000002704KARS9971.451ENSPMAG00000008360-9971.292Petromyzon_marinus
ENSSSCG00000002704KARS9989.865ENSPCIG00000010761-9989.358Phascolarctos_cinereus
ENSSSCG00000002704KARS9982.742ENSPCIG00000025469-9982.097Phascolarctos_cinereus
ENSSSCG00000002704KARS9679.371ENSPFOG00000013253kars9976.519Poecilia_formosa
ENSSSCG00000002704KARS9779.758ENSPLAG00000004189kars9979.931Poecilia_latipinna
ENSSSCG00000002704KARS9779.931ENSPMEG00000015698kars9980.104Poecilia_mexicana
ENSSSCG00000002704KARS9779.038ENSPREG00000023179kars9979.210Poecilia_reticulata
ENSSSCG00000002704KARS10093.760ENSPPYG00000007567KARS10093.760Pongo_abelii
ENSSSCG00000002704KARS8884.895ENSPCAG00000010790KARS10084.895Procavia_capensis
ENSSSCG00000002704KARS10084.255ENSPCOG00000003166KARS10084.255Propithecus_coquereli
ENSSSCG00000002704KARS10093.440ENSPVAG00000006746KARS10093.440Pteropus_vampyrus
ENSSSCG00000002704KARS9780.274ENSPNYG00000013095kars9880.000Pundamilia_nyererei
ENSSSCG00000002704KARS9682.230ENSPNAG00000013828kars9881.675Pygocentrus_nattereri
ENSSSCG00000002704KARS10091.853ENSRNOG00000019456Kars10091.853Rattus_norvegicus
ENSSSCG00000002704KARS9994.078ENSRBIG00000030118KARS9993.065Rhinopithecus_bieti
ENSSSCG00000002704KARS10092.960ENSRROG00000041418KARS10092.960Rhinopithecus_roxellana
ENSSSCG00000002704KARS9756.027YDR037WKRS19756.537Saccharomyces_cerevisiae
ENSSSCG00000002704KARS7534.105YNL073W-8234.105Saccharomyces_cerevisiae
ENSSSCG00000002704KARS10094.640ENSSBOG00000019255KARS10094.640Saimiri_boliviensis_boliviensis
ENSSSCG00000002704KARS9277.091ENSSHAG00000009005-9976.364Sarcophilus_harrisii
ENSSSCG00000002704KARS9683.477ENSSHAG00000001359-9983.133Sarcophilus_harrisii
ENSSSCG00000002704KARS9773.977ENSSHAG00000002050-9773.486Sarcophilus_harrisii
ENSSSCG00000002704KARS9479.893ENSSFOG00015014837kars9979.715Scleropages_formosus
ENSSSCG00000002704KARS9879.422ENSSMAG00000021441kars9979.422Scophthalmus_maximus
ENSSSCG00000002704KARS9879.592ENSSDUG00000001202kars9979.592Seriola_dumerili
ENSSSCG00000002704KARS9580.282ENSSLDG00000021220kars9880.458Seriola_lalandi_dorsalis
ENSSSCG00000002704KARS7696.697ENSSARG00000011493KARS7996.697Sorex_araneus
ENSSSCG00000002704KARS9782.676ENSSPUG00000004974KARS9981.910Sphenodon_punctatus
ENSSSCG00000002704KARS5967.324ENSSPUG00000000449-8167.908Sphenodon_punctatus
ENSSSCG00000002704KARS9679.268ENSSPAG00000020365kars9779.514Stegastes_partitus
ENSSSCG00000002704KARS9484.079ENSTGUG00000008400KARS9983.900Taeniopygia_guttata
ENSSSCG00000002704KARS9778.448ENSTRUG00000017551kars9975.777Takifugu_rubripes
ENSSSCG00000002704KARS8683.527ENSTNIG00000009351kars9580.496Tetraodon_nigroviridis
ENSSSCG00000002704KARS9673.264ENSTBEG00000004610KARS10073.264Tupaia_belangeri
ENSSSCG00000002704KARS10094.880ENSTTRG00000001221KARS10094.880Tursiops_truncatus
ENSSSCG00000002704KARS10093.440ENSUAMG00000017557KARS10093.440Ursus_americanus
ENSSSCG00000002704KARS10093.440ENSUMAG00000014559KARS10093.440Ursus_maritimus
ENSSSCG00000002704KARS10093.920ENSVPAG00000003716KARS10093.920Vicugna_pacos
ENSSSCG00000002704KARS10093.132ENSVVUG00000024338KARS10093.132Vulpes_vulpes
ENSSSCG00000002704KARS9978.378ENSXETG00000003569kars9978.041Xenopus_tropicalis
ENSSSCG00000002704KARS9479.787ENSXCOG00000011313kars9979.787Xiphophorus_couchianus
ENSSSCG00000002704KARS9779.381ENSXMAG00000003191kars9979.381Xiphophorus_maculatus

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