EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000002748 (Gene tree)
Gene ID: 100518664
Gene Symbol: DHX38
Alias: DDX38|KIAA0224|PRP16|PRPF16|hPrp16
Full Name: DEAH-box helicase 38
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 19104 bases
Position: chr6:14998071-15017174
Accession: 100518664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000053977	DEAD	PF00270.29	5.1e-07	1	1
ENSSSCP00000002966	DEAD	PF00270.29	5.4e-07	1	1
ENSSSCP00000049479	DEAD	PF00270.29	6.3e-07	1	1
ENSSSCP00000056158	DEAD	PF00270.29	6.3e-07	1	1
ENSSSCP00000053977	HA2	PF04408.23	2.7e-19	1	1
ENSSSCP00000002966	HA2	PF04408.23	2.9e-19	1	1
ENSSSCP00000049479	HA2	PF04408.23	3.2e-19	1	1
ENSSSCP00000056158	HA2	PF04408.23	3.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000051701	DHX38-204	5211	-	ENSSSCP00000053977	1185 (aa)	-	A0A287BD07
ENSSSCT00000065707	DHX38-202	5547	-	ENSSSCP00000049479	1325 (aa)	-	A0A287B050
ENSSSCT00000038036	DHX38-201	5631	-	ENSSSCP00000056158	1325 (aa)	-	A0A287B050
ENSSSCT00000003045	DHX38-203	5337	XM_021093856	ENSSSCP00000002966	1227 (aa)	XP_020949515	F1S3A8

Gene Model

Click here to download ENSSSCG00000002748's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000002748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000002748	DHX38	66	46.382	ENSSSCG00000017378	DHX8	67	47.974
ENSSSCG00000002748	DHX38	56	49.642	ENSSSCG00000001376	DHX16	67	49.642
ENSSSCG00000002748	DHX38	51	30.354	ENSSSCG00000010744	DHX32	87	35.616
ENSSSCG00000002748	DHX38	50	53.807	ENSSSCG00000017665	DHX40	85	53.807
ENSSSCG00000002748	DHX38	53	45.564	ENSSSCG00000008756	DHX15	82	53.846
ENSSSCG00000002748	DHX38	51	40.291	ENSSSCG00000008479	DHX57	50	40.291
ENSSSCG00000002748	DHX38	51	42.188	ENSSSCG00000039064	DHX33	91	43.000
ENSSSCG00000002748	DHX38	51	30.912	ENSSSCG00000022614	DQX1	87	38.743
ENSSSCG00000002748	DHX38	52	44.917	ENSSSCG00000007352	DHX35	92	51.961

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000002748	DHX38	100	97.718	ENSG00000140829	DHX38	99	100.000	Homo_sapiens
ENSSSCG00000002748	DHX38	94	87.856	ENSAPOG00000010788	dhx38	99	87.856	Acanthochromis_polyacanthus
ENSSSCG00000002748	DHX38	100	98.942	ENSAMEG00000002227	DHX38	99	98.942	Ailuropoda_melanoleuca
ENSSSCG00000002748	DHX38	94	87.856	ENSACIG00000000573	dhx38	99	87.856	Amphilophus_citrinellus
ENSSSCG00000002748	DHX38	76	88.542	ENSAOCG00000013483	-	98	88.542	Amphiprion_ocellaris
ENSSSCG00000002748	DHX38	94	88.235	ENSAOCG00000007610	dhx38	99	88.235	Amphiprion_ocellaris
ENSSSCG00000002748	DHX38	94	88.046	ENSAPEG00000011410	dhx38	99	88.046	Amphiprion_percula
ENSSSCG00000002748	DHX38	94	86.907	ENSATEG00000004692	dhx38	99	86.907	Anabas_testudineus
ENSSSCG00000002748	DHX38	91	93.073	ENSAPLG00000015279	DHX38	100	93.738	Anas_platyrhynchos
ENSSSCG00000002748	DHX38	94	84.688	ENSACAG00000008115	DHX38	99	84.688	Anolis_carolinensis
ENSSSCG00000002748	DHX38	100	97.881	ENSANAG00000022259	DHX38	100	97.881	Aotus_nancymaae
ENSSSCG00000002748	DHX38	91	87.200	ENSACLG00000001837	dhx38	99	87.200	Astatotilapia_calliptera
ENSSSCG00000002748	DHX38	90	90.496	ENSAMXG00000004396	dhx38	97	90.496	Astyanax_mexicanus
ENSSSCG00000002748	DHX38	100	98.615	ENSBTAG00000013265	DHX38	100	98.615	Bos_taurus
ENSSSCG00000002748	DHX38	81	70.348	WBGene00003389	mog-1	87	70.348	Caenorhabditis_elegans
ENSSSCG00000002748	DHX38	100	97.963	ENSCJAG00000015103	DHX38	100	97.963	Callithrix_jacchus
ENSSSCG00000002748	DHX38	100	98.615	ENSCAFG00000020228	DHX38	100	98.615	Canis_familiaris
ENSSSCG00000002748	DHX38	100	98.046	ENSCAFG00020020392	DHX38	100	98.046	Canis_lupus_dingo
ENSSSCG00000002748	DHX38	100	98.778	ENSCHIG00000027105	DHX38	100	98.778	Capra_hircus
ENSSSCG00000002748	DHX38	100	97.964	ENSTSYG00000012023	DHX38	100	97.964	Carlito_syrichta
ENSSSCG00000002748	DHX38	100	97.009	ENSCAPG00000016032	DHX38	100	97.009	Cavia_aperea
ENSSSCG00000002748	DHX38	100	97.964	ENSCPOG00000013965	DHX38	99	97.964	Cavia_porcellus
ENSSSCG00000002748	DHX38	100	97.881	ENSCCAG00000031157	DHX38	100	97.881	Cebus_capucinus
ENSSSCG00000002748	DHX38	100	91.336	ENSCATG00000036889	DHX38	100	96.518	Cercocebus_atys
ENSSSCG00000002748	DHX38	100	97.800	ENSCLAG00000008250	DHX38	100	97.800	Chinchilla_lanigera
ENSSSCG00000002748	DHX38	100	98.126	ENSCSAG00000004218	DHX38	100	98.126	Chlorocebus_sabaeus
ENSSSCG00000002748	DHX38	51	98.246	ENSCHOG00000009444	-	99	98.246	Choloepus_hoffmanni
ENSSSCG00000002748	DHX38	100	90.703	ENSCPBG00000027010	DHX38	100	93.548	Chrysemys_picta_bellii
ENSSSCG00000002748	DHX38	90	76.398	ENSCING00000003597	-	98	76.398	Ciona_intestinalis
ENSSSCG00000002748	DHX38	92	75.148	ENSCSAVG00000001117	-	99	85.333	Ciona_savignyi
ENSSSCG00000002748	DHX38	100	97.963	ENSCANG00000039299	DHX38	100	97.963	Colobus_angolensis_palliatus
ENSSSCG00000002748	DHX38	100	97.800	ENSCGRG00001021542	Dhx38	100	97.800	Cricetulus_griseus_chok1gshd
ENSSSCG00000002748	DHX38	100	97.800	ENSCGRG00000017386	Dhx38	100	97.800	Cricetulus_griseus_crigri
ENSSSCG00000002748	DHX38	94	87.097	ENSCSEG00000008437	dhx38	99	87.097	Cynoglossus_semilaevis
ENSSSCG00000002748	DHX38	94	87.476	ENSCVAG00000023150	dhx38	99	87.476	Cyprinodon_variegatus
ENSSSCG00000002748	DHX38	94	86.338	ENSDARG00000100013	dhx38	99	86.338	Danio_rerio
ENSSSCG00000002748	DHX38	100	97.963	ENSDNOG00000006717	DHX38	100	97.963	Dasypus_novemcinctus
ENSSSCG00000002748	DHX38	100	98.371	ENSDORG00000005226	Dhx38	100	98.371	Dipodomys_ordii
ENSSSCG00000002748	DHX38	78	73.373	FBgn0026713	l(1)G0007	99	77.419	Drosophila_melanogaster
ENSSSCG00000002748	DHX38	63	100.000	ENSETEG00000014663	-	67	100.000	Echinops_telfairi
ENSSSCG00000002748	DHX38	94	83.619	ENSEBUG00000005875	dhx38	99	83.619	Eptatretus_burgeri
ENSSSCG00000002748	DHX38	100	99.104	ENSEASG00005013249	DHX38	100	99.083	Equus_asinus_asinus
ENSSSCG00000002748	DHX38	100	99.104	ENSECAG00000000526	DHX38	99	99.104	Equus_caballus
ENSSSCG00000002748	DHX38	92	88.340	ENSELUG00000014379	dhx38	100	88.340	Esox_lucius
ENSSSCG00000002748	DHX38	100	98.859	ENSFCAG00000005831	DHX38	100	98.859	Felis_catus
ENSSSCG00000002748	DHX38	94	93.359	ENSFALG00000002671	DHX38	99	93.359	Ficedula_albicollis
ENSSSCG00000002748	DHX38	100	97.800	ENSFDAG00000015601	DHX38	100	97.800	Fukomys_damarensis
ENSSSCG00000002748	DHX38	94	87.856	ENSFHEG00000006031	dhx38	99	87.856	Fundulus_heteroclitus
ENSSSCG00000002748	DHX38	94	87.500	ENSGMOG00000002840	dhx38	99	87.500	Gadus_morhua
ENSSSCG00000002748	DHX38	99	89.251	ENSGALG00000000787	DHX38	99	93.548	Gallus_gallus
ENSSSCG00000002748	DHX38	94	87.476	ENSGAFG00000017271	dhx38	99	87.476	Gambusia_affinis
ENSSSCG00000002748	DHX38	94	86.717	ENSGACG00000015776	dhx38	99	86.717	Gasterosteus_aculeatus
ENSSSCG00000002748	DHX38	100	90.299	ENSGAGG00000015601	DHX38	100	93.548	Gopherus_agassizii
ENSSSCG00000002748	DHX38	100	97.800	ENSGGOG00000013052	DHX38	100	97.800	Gorilla_gorilla
ENSSSCG00000002748	DHX38	94	87.856	ENSHBUG00000013363	dhx38	99	87.856	Haplochromis_burtoni
ENSSSCG00000002748	DHX38	100	97.963	ENSHGLG00000013308	DHX38	100	97.963	Heterocephalus_glaber_female
ENSSSCG00000002748	DHX38	100	97.148	ENSHGLG00100015625	DHX38	100	97.148	Heterocephalus_glaber_male
ENSSSCG00000002748	DHX38	92	89.041	ENSHCOG00000003102	dhx38	99	89.041	Hippocampus_comes
ENSSSCG00000002748	DHX38	93	90.215	ENSIPUG00000006233	DHX38	100	90.215	Ictalurus_punctatus
ENSSSCG00000002748	DHX38	100	98.534	ENSSTOG00000000534	DHX38	100	98.534	Ictidomys_tridecemlineatus
ENSSSCG00000002748	DHX38	93	98.961	ENSJJAG00000015149	Dhx38	99	98.961	Jaculus_jaculus
ENSSSCG00000002748	DHX38	94	87.666	ENSKMAG00000006694	dhx38	99	87.666	Kryptolebias_marmoratus
ENSSSCG00000002748	DHX38	94	86.148	ENSLBEG00000026364	dhx38	99	86.148	Labrus_bergylta
ENSSSCG00000002748	DHX38	90	93.555	ENSLACG00000013007	DHX38	99	90.119	Latimeria_chalumnae
ENSSSCG00000002748	DHX38	94	88.994	ENSLOCG00000004169	dhx38	100	88.994	Lepisosteus_oculatus
ENSSSCG00000002748	DHX38	100	98.127	ENSLAFG00000016360	DHX38	100	98.127	Loxodonta_africana
ENSSSCG00000002748	DHX38	100	98.044	ENSMFAG00000031852	DHX38	100	98.044	Macaca_fascicularis
ENSSSCG00000002748	DHX38	100	97.963	ENSMMUG00000000677	DHX38	100	97.963	Macaca_mulatta
ENSSSCG00000002748	DHX38	100	98.044	ENSMNEG00000045083	DHX38	100	98.044	Macaca_nemestrina
ENSSSCG00000002748	DHX38	100	97.963	ENSMLEG00000029417	DHX38	100	97.963	Mandrillus_leucophaeus
ENSSSCG00000002748	DHX38	92	89.824	ENSMAMG00000021512	dhx38	99	89.824	Mastacembelus_armatus
ENSSSCG00000002748	DHX38	91	86.653	ENSMZEG00005014283	dhx38	99	86.653	Maylandia_zebra
ENSSSCG00000002748	DHX38	91	92.260	ENSMGAG00000008791	DHX38	100	93.738	Meleagris_gallopavo
ENSSSCG00000002748	DHX38	84	98.069	ENSMAUG00000006330	Dhx38	100	99.021	Mesocricetus_auratus
ENSSSCG00000002748	DHX38	100	98.207	ENSMICG00000011402	DHX38	100	98.207	Microcebus_murinus
ENSSSCG00000002748	DHX38	100	93.577	ENSMOCG00000016798	Dhx38	100	97.154	Microtus_ochrogaster
ENSSSCG00000002748	DHX38	94	88.235	ENSMMOG00000016558	dhx38	99	88.235	Mola_mola
ENSSSCG00000002748	DHX38	100	95.447	ENSMODG00000002549	DHX38	100	95.256	Monodelphis_domestica
ENSSSCG00000002748	DHX38	94	87.666	ENSMALG00000021005	dhx38	99	87.666	Monopterus_albus
ENSSSCG00000002748	DHX38	100	97.394	MGP_CAROLIEiJ_G0031541	Dhx38	100	97.394	Mus_caroli
ENSSSCG00000002748	DHX38	100	97.394	ENSMUSG00000037993	Dhx38	100	97.394	Mus_musculus
ENSSSCG00000002748	DHX38	100	97.557	MGP_PahariEiJ_G0023141	Dhx38	100	97.557	Mus_pahari
ENSSSCG00000002748	DHX38	100	97.557	MGP_SPRETEiJ_G0032659	Dhx38	100	97.557	Mus_spretus
ENSSSCG00000002748	DHX38	100	98.696	ENSMPUG00000007766	DHX38	100	98.696	Mustela_putorius_furo
ENSSSCG00000002748	DHX38	100	98.452	ENSMLUG00000013866	DHX38	100	98.452	Myotis_lucifugus
ENSSSCG00000002748	DHX38	100	97.963	ENSNGAG00000014084	Dhx38	100	97.963	Nannospalax_galili
ENSSSCG00000002748	DHX38	90	89.895	ENSNBRG00000010899	dhx38	97	89.895	Neolamprologus_brichardi
ENSSSCG00000002748	DHX38	100	97.637	ENSNLEG00000005630	DHX38	100	97.637	Nomascus_leucogenys
ENSSSCG00000002748	DHX38	55	96.653	ENSMEUG00000007747	-	72	96.653	Notamacropus_eugenii
ENSSSCG00000002748	DHX38	99	95.670	ENSOPRG00000001884	DHX38	99	96.571	Ochotona_princeps
ENSSSCG00000002748	DHX38	100	84.133	ENSOPRG00000012142	-	100	89.143	Ochotona_princeps
ENSSSCG00000002748	DHX38	100	97.800	ENSODEG00000015472	DHX38	100	97.800	Octodon_degus
ENSSSCG00000002748	DHX38	94	87.287	ENSONIG00000005916	dhx38	99	87.287	Oreochromis_niloticus
ENSSSCG00000002748	DHX38	100	97.229	ENSOCUG00000009067	DHX38	100	97.229	Oryctolagus_cuniculus
ENSSSCG00000002748	DHX38	94	87.287	ENSORLG00000007853	dhx38	99	87.287	Oryzias_latipes
ENSSSCG00000002748	DHX38	94	87.287	ENSORLG00020009844	dhx38	99	87.287	Oryzias_latipes_hni
ENSSSCG00000002748	DHX38	94	87.287	ENSORLG00015007999	dhx38	99	87.287	Oryzias_latipes_hsok
ENSSSCG00000002748	DHX38	94	86.907	ENSOMEG00000001782	dhx38	99	86.907	Oryzias_melastigma
ENSSSCG00000002748	DHX38	100	97.640	ENSOGAG00000008658	DHX38	100	97.640	Otolemur_garnettii
ENSSSCG00000002748	DHX38	100	94.963	ENSOARG00000003723	DHX38	100	96.964	Ovis_aries
ENSSSCG00000002748	DHX38	100	97.718	ENSPPAG00000042488	DHX38	100	97.718	Pan_paniscus
ENSSSCG00000002748	DHX38	100	98.859	ENSPPRG00000008930	DHX38	100	98.859	Panthera_pardus
ENSSSCG00000002748	DHX38	100	98.859	ENSPTIG00000017274	DHX38	100	98.859	Panthera_tigris_altaica
ENSSSCG00000002748	DHX38	100	97.637	ENSPTRG00000008338	DHX38	100	97.637	Pan_troglodytes
ENSSSCG00000002748	DHX38	100	97.963	ENSPANG00000022057	DHX38	100	97.963	Papio_anubis
ENSSSCG00000002748	DHX38	100	81.585	ENSPKIG00000009708	dhx38	100	86.907	Paramormyrops_kingsleyae
ENSSSCG00000002748	DHX38	94	86.717	ENSPMGG00000006063	dhx38	99	86.717	Periophthalmus_magnuspinnatus
ENSSSCG00000002748	DHX38	100	97.720	ENSPEMG00000008011	Dhx38	100	97.720	Peromyscus_maniculatus_bairdii
ENSSSCG00000002748	DHX38	100	95.122	ENSPCIG00000001712	DHX38	100	95.400	Phascolarctos_cinereus
ENSSSCG00000002748	DHX38	94	86.817	ENSPFOG00000001246	dhx38	99	86.817	Poecilia_formosa
ENSSSCG00000002748	DHX38	94	87.476	ENSPLAG00000004022	dhx38	99	87.476	Poecilia_latipinna
ENSSSCG00000002748	DHX38	94	87.856	ENSPMEG00000015475	dhx38	99	87.856	Poecilia_mexicana
ENSSSCG00000002748	DHX38	94	87.856	ENSPREG00000023207	dhx38	99	87.856	Poecilia_reticulata
ENSSSCG00000002748	DHX38	100	97.231	ENSPPYG00000007515	DHX38	99	99.604	Pongo_abelii
ENSSSCG00000002748	DHX38	92	95.352	ENSPCAG00000010592	DHX38	93	98.844	Procavia_capensis
ENSSSCG00000002748	DHX38	100	98.289	ENSPCOG00000027770	DHX38	100	98.289	Propithecus_coquereli
ENSSSCG00000002748	DHX38	94	98.432	ENSPVAG00000010259	DHX38	100	98.432	Pteropus_vampyrus
ENSSSCG00000002748	DHX38	94	87.476	ENSPNYG00000013335	dhx38	99	87.476	Pundamilia_nyererei
ENSSSCG00000002748	DHX38	100	81.094	ENSPNAG00000004859	dhx38	100	86.717	Pygocentrus_nattereri
ENSSSCG00000002748	DHX38	100	97.800	ENSRNOG00000014619	Dhx38	100	97.800	Rattus_norvegicus
ENSSSCG00000002748	DHX38	100	98.044	ENSRBIG00000025475	DHX38	100	98.044	Rhinopithecus_bieti
ENSSSCG00000002748	DHX38	100	98.044	ENSRROG00000028630	DHX38	100	98.044	Rhinopithecus_roxellana
ENSSSCG00000002748	DHX38	61	49.361	YKR086W	PRP16	71	53.407	Saccharomyces_cerevisiae
ENSSSCG00000002748	DHX38	100	97.800	ENSSBOG00000021842	DHX38	100	97.800	Saimiri_boliviensis_boliviensis
ENSSSCG00000002748	DHX38	94	93.223	ENSSHAG00000016871	DHX38	100	92.254	Sarcophilus_harrisii
ENSSSCG00000002748	DHX38	94	87.097	ENSSFOG00015014930	dhx38	100	87.097	Scleropages_formosus
ENSSSCG00000002748	DHX38	92	88.845	ENSSMAG00000000095	dhx38	99	88.845	Scophthalmus_maximus
ENSSSCG00000002748	DHX38	92	90.020	ENSSDUG00000001413	dhx38	99	90.702	Seriola_dumerili
ENSSSCG00000002748	DHX38	99	78.756	ENSSLDG00000021050	dhx38	99	82.387	Seriola_lalandi_dorsalis
ENSSSCG00000002748	DHX38	94	87.856	ENSSPAG00000020537	dhx38	99	87.856	Stegastes_partitus
ENSSSCG00000002748	DHX38	99	86.612	ENSTGUG00000008196	DHX38	99	86.364	Taeniopygia_guttata
ENSSSCG00000002748	DHX38	94	88.046	ENSTRUG00000017588	dhx38	99	88.046	Takifugu_rubripes
ENSSSCG00000002748	DHX38	94	87.146	ENSTNIG00000009345	dhx38	99	87.146	Tetraodon_nigroviridis
ENSSSCG00000002748	DHX38	100	86.145	ENSTBEG00000001426	DHX38	100	88.022	Tupaia_belangeri
ENSSSCG00000002748	DHX38	100	93.073	ENSTTRG00000001914	DHX38	100	93.073	Tursiops_truncatus
ENSSSCG00000002748	DHX38	100	98.779	ENSUAMG00000020435	DHX38	100	98.779	Ursus_americanus
ENSSSCG00000002748	DHX38	100	97.474	ENSUMAG00000018189	DHX38	100	97.474	Ursus_maritimus
ENSSSCG00000002748	DHX38	100	98.615	ENSVVUG00000017474	DHX38	100	98.615	Vulpes_vulpes
ENSSSCG00000002748	DHX38	91	92.355	ENSXETG00000023447	dhx38	100	92.355	Xenopus_tropicalis
ENSSSCG00000002748	DHX38	94	87.666	ENSXCOG00000011321	dhx38	99	87.666	Xiphophorus_couchianus
ENSSSCG00000002748	DHX38	94	87.666	ENSXMAG00000003292	dhx38	99	87.666	Xiphophorus_maculatus