EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000002753 (Gene tree)
Gene ID: 100516270
Gene Symbol: NOB1
Alias: ART-4|MST158|NOB1P|PSMD8BP1
Full Name: NIN1 (RPN12) binding protein 1 homolog
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 13626 bases
Position: chr6:17233846-17247471
Accession: 100516270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000002971	NOB1_Zn_bind	PF08772.11	3.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000003050	NOB1-201	3671	XM_003126901	ENSSSCP00000002971	413 (aa)	XP_003126949	F1S396

Gene Model

Click here to download ENSSSCG00000002753's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000002753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000002753	NOB1	100	89.588	ENSG00000141101	NOB1	98	92.308	Homo_sapiens
ENSSSCG00000002753	NOB1	85	62.606	ENSAPOG00000008241	nob1	94	62.606	Acanthochromis_polyacanthus
ENSSSCG00000002753	NOB1	100	89.183	ENSAMEG00000006706	NOB1	99	89.183	Ailuropoda_melanoleuca
ENSSSCG00000002753	NOB1	99	61.972	ENSACIG00000001503	nob1	99	63.095	Amphilophus_citrinellus
ENSSSCG00000002753	NOB1	100	64.423	ENSAOCG00000006533	nob1	100	62.005	Amphiprion_ocellaris
ENSSSCG00000002753	NOB1	100	64.663	ENSAPEG00000000029	nob1	100	64.663	Amphiprion_percula
ENSSSCG00000002753	NOB1	100	64.663	ENSAPEG00000000032	-	100	64.663	Amphiprion_percula
ENSSSCG00000002753	NOB1	100	64.096	ENSATEG00000014585	nob1	100	64.096	Anabas_testudineus
ENSSSCG00000002753	NOB1	99	68.095	ENSACAG00000003697	NOB1	87	68.333	Anolis_carolinensis
ENSSSCG00000002753	NOB1	100	88.862	ENSANAG00000036611	NOB1	100	88.620	Aotus_nancymaae
ENSSSCG00000002753	NOB1	99	62.295	ENSACLG00000024897	nob1	99	61.827	Astatotilapia_calliptera
ENSSSCG00000002753	NOB1	95	57.746	ENSAMXG00000003642	nob1	100	57.277	Astyanax_mexicanus
ENSSSCG00000002753	NOB1	100	92.010	ENSBTAG00000020633	NOB1	100	92.010	Bos_taurus
ENSSSCG00000002753	NOB1	100	88.862	ENSCJAG00000015230	NOB1	100	88.620	Callithrix_jacchus
ENSSSCG00000002753	NOB1	100	90.097	ENSCAFG00000020251	NOB1	100	89.614	Canis_familiaris
ENSSSCG00000002753	NOB1	100	90.097	ENSCAFG00020020297	NOB1	100	89.614	Canis_lupus_dingo
ENSSSCG00000002753	NOB1	100	90.799	ENSCHIG00000027022	NOB1	100	90.799	Capra_hircus
ENSSSCG00000002753	NOB1	100	86.811	ENSTSYG00000003084	NOB1	100	87.019	Carlito_syrichta
ENSSSCG00000002753	NOB1	84	84.150	ENSCAPG00000015542	NOB1	100	84.150	Cavia_aperea
ENSSSCG00000002753	NOB1	100	85.230	ENSCPOG00000022538	NOB1	100	85.230	Cavia_porcellus
ENSSSCG00000002753	NOB1	100	89.183	ENSCCAG00000023773	NOB1	100	88.916	Cebus_capucinus
ENSSSCG00000002753	NOB1	100	88.620	ENSCATG00000039487	NOB1	100	88.620	Cercocebus_atys
ENSSSCG00000002753	NOB1	84	79.539	ENSCLAG00000005926	NOB1	100	80.403	Chinchilla_lanigera
ENSSSCG00000002753	NOB1	100	88.378	ENSCSAG00000004158	NOB1	100	88.378	Chlorocebus_sabaeus
ENSSSCG00000002753	NOB1	100	79.419	ENSCHOG00000011047	NOB1	100	77.724	Choloepus_hoffmanni
ENSSSCG00000002753	NOB1	100	71.663	ENSCPBG00000027035	NOB1	93	71.294	Chrysemys_picta_bellii
ENSSSCG00000002753	NOB1	99	48.349	ENSCING00000023441	-	99	48.681	Ciona_intestinalis
ENSSSCG00000002753	NOB1	99	47.775	ENSCSAVG00000009081	-	99	47.743	Ciona_savignyi
ENSSSCG00000002753	NOB1	100	86.925	ENSCGRG00001009255	Nob1	95	87.167	Cricetulus_griseus_chok1gshd
ENSSSCG00000002753	NOB1	100	86.925	ENSCGRG00000010869	Nob1	100	87.167	Cricetulus_griseus_crigri
ENSSSCG00000002753	NOB1	87	62.567	ENSCSEG00000019657	nob1	91	59.358	Cynoglossus_semilaevis
ENSSSCG00000002753	NOB1	99	58.998	ENSDARG00000016080	nob1	99	60.137	Danio_rerio
ENSSSCG00000002753	NOB1	100	87.893	ENSDNOG00000041643	NOB1	100	86.683	Dasypus_novemcinctus
ENSSSCG00000002753	NOB1	100	86.199	ENSDORG00000000483	Nob1	100	86.441	Dipodomys_ordii
ENSSSCG00000002753	NOB1	97	35.637	FBgn0030177	CG2972	76	44.878	Drosophila_melanogaster
ENSSSCG00000002753	NOB1	59	75.918	ENSETEG00000000011	-	58	73.878	Echinops_telfairi
ENSSSCG00000002753	NOB1	99	45.122	ENSEBUG00000004464	nob1	98	45.985	Eptatretus_burgeri
ENSSSCG00000002753	NOB1	100	91.106	ENSEASG00005021356	NOB1	84	90.865	Equus_asinus_asinus
ENSSSCG00000002753	NOB1	100	91.587	ENSECAG00000023748	NOB1	81	91.346	Equus_caballus
ENSSSCG00000002753	NOB1	68	71.228	ENSEEUG00000014384	NOB1	66	69.474	Erinaceus_europaeus
ENSSSCG00000002753	NOB1	99	61.678	ENSELUG00000016199	nob1	99	59.184	Esox_lucius
ENSSSCG00000002753	NOB1	100	91.304	ENSFCAG00000002958	NOB1	100	91.063	Felis_catus
ENSSSCG00000002753	NOB1	50	75.463	ENSFALG00000002747	NOB1	85	75.463	Ficedula_albicollis
ENSSSCG00000002753	NOB1	100	85.230	ENSFDAG00000009239	NOB1	100	85.230	Fukomys_damarensis
ENSSSCG00000002753	NOB1	50	68.116	ENSFHEG00000007657	nob1	52	67.805	Fundulus_heteroclitus
ENSSSCG00000002753	NOB1	99	64.216	ENSGMOG00000010638	nob1	98	64.216	Gadus_morhua
ENSSSCG00000002753	NOB1	100	63.146	ENSGALG00000000693	NOB1	100	63.303	Gallus_gallus
ENSSSCG00000002753	NOB1	100	57.391	ENSGAFG00000006104	nob1	100	57.391	Gambusia_affinis
ENSSSCG00000002753	NOB1	99	62.892	ENSGACG00000017552	nob1	99	62.892	Gasterosteus_aculeatus
ENSSSCG00000002753	NOB1	100	71.596	ENSGAGG00000003902	NOB1	100	70.824	Gopherus_agassizii
ENSSSCG00000002753	NOB1	100	89.831	ENSGGOG00000025456	NOB1	100	89.831	Gorilla_gorilla
ENSSSCG00000002753	NOB1	99	65.610	ENSHBUG00000002580	nob1	99	65.610	Haplochromis_burtoni
ENSSSCG00000002753	NOB1	100	85.749	ENSHGLG00000014260	NOB1	100	85.749	Heterocephalus_glaber_female
ENSSSCG00000002753	NOB1	100	85.749	ENSHGLG00100013978	NOB1	100	85.749	Heterocephalus_glaber_male
ENSSSCG00000002753	NOB1	99	58.974	ENSHCOG00000006699	nob1	99	61.058	Hippocampus_comes
ENSSSCG00000002753	NOB1	99	55.508	ENSIPUG00000007579	nob1	99	54.025	Ictalurus_punctatus
ENSSSCG00000002753	NOB1	100	87.409	ENSSTOG00000001204	NOB1	100	87.651	Ictidomys_tridecemlineatus
ENSSSCG00000002753	NOB1	100	86.925	ENSJJAG00000015543	Nob1	100	86.925	Jaculus_jaculus
ENSSSCG00000002753	NOB1	99	66.024	ENSKMAG00000018220	nob1	99	66.024	Kryptolebias_marmoratus
ENSSSCG00000002753	NOB1	100	65.385	ENSLBEG00000026375	nob1	100	65.385	Labrus_bergylta
ENSSSCG00000002753	NOB1	100	65.596	ENSLACG00000006973	NOB1	98	65.826	Latimeria_chalumnae
ENSSSCG00000002753	NOB1	99	59.775	ENSLOCG00000001411	nob1	99	59.775	Lepisosteus_oculatus
ENSSSCG00000002753	NOB1	100	87.711	ENSLAFG00000008978	NOB1	100	88.193	Loxodonta_africana
ENSSSCG00000002753	NOB1	100	88.378	ENSMFAG00000030131	NOB1	100	88.378	Macaca_fascicularis
ENSSSCG00000002753	NOB1	100	89.104	ENSMMUG00000006506	NOB1	100	89.104	Macaca_mulatta
ENSSSCG00000002753	NOB1	100	89.104	ENSMNEG00000028829	NOB1	100	81.840	Macaca_nemestrina
ENSSSCG00000002753	NOB1	100	89.104	ENSMLEG00000032913	NOB1	100	89.104	Mandrillus_leucophaeus
ENSSSCG00000002753	NOB1	99	64.634	ENSMZEG00005028346	nob1	99	64.634	Maylandia_zebra
ENSSSCG00000002753	NOB1	64	59.712	ENSMZEG00005003827	-	84	59.928	Maylandia_zebra
ENSSSCG00000002753	NOB1	63	70.412	ENSMGAG00000008675	NOB1	99	68.592	Meleagris_gallopavo
ENSSSCG00000002753	NOB1	100	85.230	ENSMAUG00000013554	Nob1	100	85.230	Mesocricetus_auratus
ENSSSCG00000002753	NOB1	100	91.283	ENSMICG00000012123	NOB1	100	91.283	Microcebus_murinus
ENSSSCG00000002753	NOB1	100	86.925	ENSMOCG00000010370	Nob1	100	86.925	Microtus_ochrogaster
ENSSSCG00000002753	NOB1	100	65.871	ENSMMOG00000002120	nob1	100	67.225	Mola_mola
ENSSSCG00000002753	NOB1	100	73.903	ENSMODG00000002677	NOB1	100	75.467	Monodelphis_domestica
ENSSSCG00000002753	NOB1	99	63.768	ENSMALG00000014580	nob1	100	64.010	Monopterus_albus
ENSSSCG00000002753	NOB1	100	84.988	MGP_CAROLIEiJ_G0031536	Nob1	98	84.988	Mus_caroli
ENSSSCG00000002753	NOB1	100	84.988	ENSMUSG00000003848	Nob1	100	84.988	Mus_musculus
ENSSSCG00000002753	NOB1	100	86.199	MGP_PahariEiJ_G0023136	Nob1	100	86.199	Mus_pahari
ENSSSCG00000002753	NOB1	100	85.230	MGP_SPRETEiJ_G0032654	Nob1	98	85.230	Mus_spretus
ENSSSCG00000002753	NOB1	100	87.923	ENSMPUG00000007483	NOB1	91	89.855	Mustela_putorius_furo
ENSSSCG00000002753	NOB1	100	89.104	ENSMLUG00000006667	NOB1	100	88.136	Myotis_lucifugus
ENSSSCG00000002753	NOB1	100	87.893	ENSNGAG00000008627	Nob1	100	87.893	Nannospalax_galili
ENSSSCG00000002753	NOB1	100	89.588	ENSNLEG00000005572	NOB1	100	89.588	Nomascus_leucogenys
ENSSSCG00000002753	NOB1	78	86.503	ENSOPRG00000006721	NOB1	100	84.923	Ochotona_princeps
ENSSSCG00000002753	NOB1	100	84.262	ENSODEG00000014376	NOB1	100	84.262	Octodon_degus
ENSSSCG00000002753	NOB1	99	60.909	ENSONIG00000003319	nob1	99	61.364	Oreochromis_niloticus
ENSSSCG00000002753	NOB1	84	85.345	ENSOCUG00000004400	NOB1	100	85.345	Oryctolagus_cuniculus
ENSSSCG00000002753	NOB1	100	63.942	ENSORLG00000018862	nob1	100	63.942	Oryzias_latipes
ENSSSCG00000002753	NOB1	100	63.942	ENSORLG00020014687	nob1	100	63.942	Oryzias_latipes_hni
ENSSSCG00000002753	NOB1	100	64.183	ENSORLG00015012156	nob1	100	64.183	Oryzias_latipes_hsok
ENSSSCG00000002753	NOB1	100	59.130	ENSOMEG00000022722	nob1	100	59.783	Oryzias_melastigma
ENSSSCG00000002753	NOB1	100	81.114	ENSOGAG00000004590	NOB1	100	80.872	Otolemur_garnettii
ENSSSCG00000002753	NOB1	100	89.831	ENSOARG00000003606	NOB1	100	89.831	Ovis_aries
ENSSSCG00000002753	NOB1	98	80.893	ENSPPAG00000003317	-	100	80.893	Pan_paniscus
ENSSSCG00000002753	NOB1	100	89.346	ENSPPAG00000040257	NOB1	100	89.346	Pan_paniscus
ENSSSCG00000002753	NOB1	100	90.821	ENSPPRG00000016949	NOB1	100	91.063	Panthera_pardus
ENSSSCG00000002753	NOB1	100	91.063	ENSPTIG00000011234	NOB1	100	91.304	Panthera_tigris_altaica
ENSSSCG00000002753	NOB1	100	89.346	ENSPTRG00000008285	NOB1	100	89.346	Pan_troglodytes
ENSSSCG00000002753	NOB1	100	89.614	ENSPANG00000015858	NOB1	100	89.104	Papio_anubis
ENSSSCG00000002753	NOB1	99	65.321	ENSPKIG00000020293	nob1	99	64.775	Paramormyrops_kingsleyae
ENSSSCG00000002753	NOB1	99	68.720	ENSPSIG00000012477	NOB1	99	67.619	Pelodiscus_sinensis
ENSSSCG00000002753	NOB1	99	62.560	ENSPMGG00000023476	nob1	100	61.176	Periophthalmus_magnuspinnatus
ENSSSCG00000002753	NOB1	100	85.990	ENSPEMG00000010995	Nob1	100	85.990	Peromyscus_maniculatus_bairdii
ENSSSCG00000002753	NOB1	84	61.433	ENSPFOG00000000027	nob1	100	61.708	Poecilia_formosa
ENSSSCG00000002753	NOB1	65	65.672	ENSPLAG00000011546	nob1	94	64.925	Poecilia_latipinna
ENSSSCG00000002753	NOB1	100	61.687	ENSPMEG00000023435	nob1	100	61.205	Poecilia_mexicana
ENSSSCG00000002753	NOB1	99	58.388	ENSPREG00000007675	nob1	100	57.918	Poecilia_reticulata
ENSSSCG00000002753	NOB1	100	89.346	ENSPPYG00000007509	NOB1	100	89.346	Pongo_abelii
ENSSSCG00000002753	NOB1	100	82.494	ENSPCAG00000001527	NOB1	100	80.576	Procavia_capensis
ENSSSCG00000002753	NOB1	100	90.799	ENSPCOG00000025515	NOB1	100	90.799	Propithecus_coquereli
ENSSSCG00000002753	NOB1	78	66.049	ENSPVAG00000013330	NOB1	78	63.889	Pteropus_vampyrus
ENSSSCG00000002753	NOB1	99	62.683	ENSPNYG00000018449	nob1	99	62.683	Pundamilia_nyererei
ENSSSCG00000002753	NOB1	99	58.161	ENSPNAG00000004244	nob1	99	58.391	Pygocentrus_nattereri
ENSSSCG00000002753	NOB1	100	87.167	ENSRNOG00000021890	Nob1	100	87.167	Rattus_norvegicus
ENSSSCG00000002753	NOB1	100	89.104	ENSRBIG00000019599	NOB1	100	89.104	Rhinopithecus_bieti
ENSSSCG00000002753	NOB1	100	89.104	ENSRROG00000033419	NOB1	100	89.104	Rhinopithecus_roxellana
ENSSSCG00000002753	NOB1	84	89.080	ENSSBOG00000029042	NOB1	89	88.793	Saimiri_boliviensis_boliviensis
ENSSSCG00000002753	NOB1	100	78.230	ENSSHAG00000015387	NOB1	100	78.947	Sarcophilus_harrisii
ENSSSCG00000002753	NOB1	100	63.825	ENSSFOG00015008503	nob1	100	64.302	Scleropages_formosus
ENSSSCG00000002753	NOB1	100	63.810	ENSSMAG00000003064	nob1	100	64.762	Scophthalmus_maximus
ENSSSCG00000002753	NOB1	100	63.723	ENSSDUG00000007307	nob1	100	63.744	Seriola_dumerili
ENSSSCG00000002753	NOB1	69	72.067	ENSSLDG00000011459	-	96	72.067	Seriola_lalandi_dorsalis
ENSSSCG00000002753	NOB1	94	66.414	ENSSPUG00000005621	NOB1	99	71.795	Sphenodon_punctatus
ENSSSCG00000002753	NOB1	100	64.578	ENSSPAG00000022362	nob1	100	64.578	Stegastes_partitus
ENSSSCG00000002753	NOB1	50	76.744	ENSTGUG00000008124	NOB1	93	76.636	Taeniopygia_guttata
ENSSSCG00000002753	NOB1	99	62.100	ENSTRUG00000023145	nob1	100	61.644	Takifugu_rubripes
ENSSSCG00000002753	NOB1	99	62.100	ENSTRUG00000004780	nob1	100	61.644	Takifugu_rubripes
ENSSSCG00000002753	NOB1	99	63.070	ENSTNIG00000002552	nob1	100	62.590	Tetraodon_nigroviridis
ENSSSCG00000002753	NOB1	59	85.714	ENSTBEG00000000690	NOB1	52	85.714	Tupaia_belangeri
ENSSSCG00000002753	NOB1	62	89.453	ENSUAMG00000028135	NOB1	100	89.844	Ursus_americanus
ENSSSCG00000002753	NOB1	100	90.097	ENSUMAG00000018658	NOB1	95	90.338	Ursus_maritimus
ENSSSCG00000002753	NOB1	100	89.372	ENSVVUG00000017271	NOB1	100	88.889	Vulpes_vulpes
ENSSSCG00000002753	NOB1	100	63.448	ENSXETG00000017874	nob1	99	62.529	Xenopus_tropicalis
ENSSSCG00000002753	NOB1	84	62.000	ENSXCOG00000009734	nob1	100	60.000	Xiphophorus_couchianus
ENSSSCG00000002753	NOB1	100	62.708	ENSXMAG00000017371	nob1	100	61.429	Xiphophorus_maculatus