EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000002836 (Gene tree)
Gene ID: 100519899
Gene Symbol: SALL1
Alias: Hsal1|TBS|ZNF794
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 18096 bases
Position: chr6:33732003-33750098
Accession: 100519899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000003056	zf-C2H2	PF00096.26	7e-34	1	6
ENSSSCP00000003056	zf-C2H2	PF00096.26	7e-34	2	6
ENSSSCP00000003056	zf-C2H2	PF00096.26	7e-34	3	6
ENSSSCP00000003056	zf-C2H2	PF00096.26	7e-34	4	6
ENSSSCP00000003056	zf-C2H2	PF00096.26	7e-34	5	6
ENSSSCP00000003056	zf-C2H2	PF00096.26	7e-34	6	6
ENSSSCP00000041515	zf-C2H2	PF00096.26	4.8e-31	1	5
ENSSSCP00000041515	zf-C2H2	PF00096.26	4.8e-31	2	5
ENSSSCP00000041515	zf-C2H2	PF00096.26	4.8e-31	3	5
ENSSSCP00000041515	zf-C2H2	PF00096.26	4.8e-31	4	5
ENSSSCP00000041515	zf-C2H2	PF00096.26	4.8e-31	5	5
ENSSSCP00000003056	zf-met	PF12874.7	1.4e-24	1	5
ENSSSCP00000003056	zf-met	PF12874.7	1.4e-24	2	5
ENSSSCP00000003056	zf-met	PF12874.7	1.4e-24	3	5
ENSSSCP00000003056	zf-met	PF12874.7	1.4e-24	4	5
ENSSSCP00000003056	zf-met	PF12874.7	1.4e-24	5	5
ENSSSCP00000041515	zf-met	PF12874.7	3e-23	1	5
ENSSSCP00000041515	zf-met	PF12874.7	3e-23	2	5
ENSSSCP00000041515	zf-met	PF12874.7	3e-23	3	5
ENSSSCP00000041515	zf-met	PF12874.7	3e-23	4	5
ENSSSCP00000041515	zf-met	PF12874.7	3e-23	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000003137	SALL1-201	6641	XM_003126987	ENSSSCP00000003056	1326 (aa)	XP_003127035	F1REZ7
ENSSSCT00000045366	SALL1-202	7734	-	ENSSSCP00000041515	1230 (aa)	-	A0A287AC96

Gene Model

Click here to download ENSSSCG00000002836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000002836's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000002836	SALL1	99	62.745	ENSSSCG00000007479	SALL4	84	62.745
ENSSSCG00000002836	SALL1	86	55.915	ENSSSCG00000004858	SALL3	99	51.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000002836	SALL1	100	92.464	ENSG00000103449	SALL1	100	92.567	Homo_sapiens
ENSSSCG00000002836	SALL1	100	68.185	ENSAPOG00000022764	sall1a	99	67.985	Acanthochromis_polyacanthus
ENSSSCG00000002836	SALL1	100	91.704	ENSAMEG00000006817	SALL1	100	91.478	Ailuropoda_melanoleuca
ENSSSCG00000002836	SALL1	100	66.866	ENSACIG00000004231	sall1a	99	66.717	Amphilophus_citrinellus
ENSSSCG00000002836	SALL1	100	68.185	ENSAOCG00000002800	sall1a	99	67.985	Amphiprion_ocellaris
ENSSSCG00000002836	SALL1	100	68.185	ENSAPEG00000010179	sall1a	99	67.985	Amphiprion_percula
ENSSSCG00000002836	SALL1	100	67.364	ENSATEG00000003006	sall1a	100	67.015	Anabas_testudineus
ENSSSCG00000002836	SALL1	100	85.068	ENSAPLG00000003356	SALL1	99	84.604	Anas_platyrhynchos
ENSSSCG00000002836	SALL1	99	80.243	ENSACAG00000014399	SALL1	96	79.772	Anolis_carolinensis
ENSSSCG00000002836	SALL1	100	92.389	ENSANAG00000027238	SALL1	100	92.163	Aotus_nancymaae
ENSSSCG00000002836	SALL1	100	67.016	ENSACLG00000017148	sall1a	99	66.935	Astatotilapia_calliptera
ENSSSCG00000002836	SALL1	97	55.738	ENSAMXG00000017702	sall1b	99	50.702	Astyanax_mexicanus
ENSSSCG00000002836	SALL1	100	68.531	ENSAMXG00000018599	sall1a	99	68.287	Astyanax_mexicanus
ENSSSCG00000002836	SALL1	100	93.067	ENSBTAG00000008544	SALL1	100	92.992	Bos_taurus
ENSSSCG00000002836	SALL1	100	92.389	ENSCJAG00000001740	SALL1	100	92.163	Callithrix_jacchus
ENSSSCG00000002836	SALL1	100	91.943	ENSCAFG00000009755	SALL1	100	91.867	Canis_familiaris
ENSSSCG00000002836	SALL1	100	91.943	ENSCAFG00020002842	SALL1	100	91.867	Canis_lupus_dingo
ENSSSCG00000002836	SALL1	100	92.997	ENSCHIG00000026074	SALL1	100	92.545	Capra_hircus
ENSSSCG00000002836	SALL1	100	92.099	ENSTSYG00000029464	SALL1	100	91.931	Carlito_syrichta
ENSSSCG00000002836	SALL1	98	91.391	ENSCPOG00000006564	SALL1	100	91.077	Cavia_porcellus
ENSSSCG00000002836	SALL1	100	89.751	ENSCCAG00000001639	SALL1	100	89.450	Cebus_capucinus
ENSSSCG00000002836	SALL1	100	92.992	ENSCATG00000004982	SALL1	100	92.690	Cercocebus_atys
ENSSSCG00000002836	SALL1	100	91.554	ENSCLAG00000006380	SALL1	100	91.629	Chinchilla_lanigera
ENSSSCG00000002836	SALL1	100	91.937	ENSCSAG00000005319	SALL1	100	91.711	Chlorocebus_sabaeus
ENSSSCG00000002836	SALL1	71	94.882	ENSCHOG00000000800	-	69	94.882	Choloepus_hoffmanni
ENSSSCG00000002836	SALL1	100	84.766	ENSCPBG00000015924	SALL1	99	84.691	Chrysemys_picta_bellii
ENSSSCG00000002836	SALL1	100	92.615	ENSCANG00000036664	SALL1	100	92.602	Colobus_angolensis_palliatus
ENSSSCG00000002836	SALL1	100	88.084	ENSCGRG00001023314	-	100	88.386	Cricetulus_griseus_chok1gshd
ENSSSCG00000002836	SALL1	98	87.846	ENSCGRG00000009496	Sall1	100	88.154	Cricetulus_griseus_crigri
ENSSSCG00000002836	SALL1	100	65.625	ENSCSEG00000009349	sall1a	100	65.502	Cynoglossus_semilaevis
ENSSSCG00000002836	SALL1	97	65.583	ENSCVAG00000020513	sall1a	99	65.445	Cyprinodon_variegatus
ENSSSCG00000002836	SALL1	97	49.333	ENSDARG00000075891	sall1b	99	45.753	Danio_rerio
ENSSSCG00000002836	SALL1	100	67.238	ENSDARG00000074319	sall1a	100	66.667	Danio_rerio
ENSSSCG00000002836	SALL1	100	89.759	ENSDNOG00000016413	SALL1	100	89.834	Dasypus_novemcinctus
ENSSSCG00000002836	SALL1	98	89.923	ENSETEG00000015150	SALL1	100	89.615	Echinops_telfairi
ENSSSCG00000002836	SALL1	63	61.538	ENSEBUG00000008798	SALL1	64	61.538	Eptatretus_burgeri
ENSSSCG00000002836	SALL1	100	92.836	ENSEASG00005014602	SALL1	100	92.986	Equus_asinus_asinus
ENSSSCG00000002836	SALL1	98	91.091	ENSECAG00000011334	SALL1	99	91.257	Equus_caballus
ENSSSCG00000002836	SALL1	98	91.104	ENSEEUG00000002014	SALL1	100	90.414	Erinaceus_europaeus
ENSSSCG00000002836	SALL1	99	51.218	ENSELUG00000017774	-	99	50.037	Esox_lucius
ENSSSCG00000002836	SALL1	100	65.395	ENSELUG00000006159	sall1a	100	64.851	Esox_lucius
ENSSSCG00000002836	SALL1	100	91.272	ENSFCAG00000024654	SALL1	100	91.046	Felis_catus
ENSSSCG00000002836	SALL1	100	83.735	ENSFALG00000000074	SALL1	99	83.547	Ficedula_albicollis
ENSSSCG00000002836	SALL1	100	66.567	ENSFHEG00000012579	sall1a	99	66.492	Fundulus_heteroclitus
ENSSSCG00000002836	SALL1	75	63.462	ENSFHEG00000008424	-	96	63.462	Fundulus_heteroclitus
ENSSSCG00000002836	SALL1	100	65.850	ENSGMOG00000006103	sall1a	99	65.599	Gadus_morhua
ENSSSCG00000002836	SALL1	82	48.611	ENSGMOG00000013383	-	80	48.072	Gadus_morhua
ENSSSCG00000002836	SALL1	100	84.540	ENSGALG00000039238	SALL1	99	83.925	Gallus_gallus
ENSSSCG00000002836	SALL1	100	67.114	ENSGAFG00000009964	sall1a	99	66.916	Gambusia_affinis
ENSSSCG00000002836	SALL1	100	66.368	ENSGACG00000016702	sall1a	100	65.870	Gasterosteus_aculeatus
ENSSSCG00000002836	SALL1	100	84.540	ENSGAGG00000013979	SALL1	99	84.446	Gopherus_agassizii
ENSSSCG00000002836	SALL1	100	92.841	ENSGGOG00000000663	SALL1	100	92.690	Gorilla_gorilla
ENSSSCG00000002836	SALL1	100	66.941	ENSHBUG00000022005	sall1a	99	66.935	Haplochromis_burtoni
ENSSSCG00000002836	SALL1	100	91.101	ENSHGLG00000004288	-	100	91.101	Heterocephalus_glaber_female
ENSSSCG00000002836	SALL1	100	91.101	ENSHGLG00100017496	SALL1	100	91.101	Heterocephalus_glaber_male
ENSSSCG00000002836	SALL1	100	65.405	ENSHCOG00000000974	sall1a	99	65.448	Hippocampus_comes
ENSSSCG00000002836	SALL1	99	69.081	ENSIPUG00000016265	SALL1	99	68.488	Ictalurus_punctatus
ENSSSCG00000002836	SALL1	99	48.750	ENSIPUG00000022928	sall1b	99	48.140	Ictalurus_punctatus
ENSSSCG00000002836	SALL1	100	91.121	ENSSTOG00000020885	SALL1	100	91.039	Ictidomys_tridecemlineatus
ENSSSCG00000002836	SALL1	100	66.841	ENSKMAG00000016681	sall1a	99	66.841	Kryptolebias_marmoratus
ENSSSCG00000002836	SALL1	97	66.129	ENSLBEG00000012207	sall1a	95	65.695	Labrus_bergylta
ENSSSCG00000002836	SALL1	100	77.526	ENSLACG00000003556	SALL1	99	76.755	Latimeria_chalumnae
ENSSSCG00000002836	SALL1	95	44.118	ENSLACG00000014018	-	91	44.118	Latimeria_chalumnae
ENSSSCG00000002836	SALL1	100	72.985	ENSLOCG00000007283	sall1b	99	72.591	Lepisosteus_oculatus
ENSSSCG00000002836	SALL1	98	91.007	ENSLAFG00000015251	SALL1	100	90.546	Loxodonta_africana
ENSSSCG00000002836	SALL1	100	93.218	ENSMFAG00000003298	SALL1	100	92.916	Macaca_fascicularis
ENSSSCG00000002836	SALL1	93	93.415	ENSMMUG00000017200	SALL1	100	93.089	Macaca_mulatta
ENSSSCG00000002836	SALL1	93	93.333	ENSMNEG00000034770	SALL1	100	93.171	Macaca_nemestrina
ENSSSCG00000002836	SALL1	100	92.992	ENSMLEG00000036406	SALL1	100	92.764	Mandrillus_leucophaeus
ENSSSCG00000002836	SALL1	100	67.586	ENSMAMG00000004164	sall1a	100	67.014	Mastacembelus_armatus
ENSSSCG00000002836	SALL1	100	67.016	ENSMZEG00005006479	sall1a	99	66.935	Maylandia_zebra
ENSSSCG00000002836	SALL1	98	84.627	ENSMGAG00000004704	SALL1	99	84.000	Meleagris_gallopavo
ENSSSCG00000002836	SALL1	100	87.717	ENSMAUG00000019093	Sall1	100	87.943	Mesocricetus_auratus
ENSSSCG00000002836	SALL1	100	90.731	ENSMICG00000036486	SALL1	100	90.422	Microcebus_murinus
ENSSSCG00000002836	SALL1	100	66.916	ENSMMOG00000016400	sall1a	100	66.418	Mola_mola
ENSSSCG00000002836	SALL1	100	88.084	ENSMODG00000013114	SALL1	100	87.632	Monodelphis_domestica
ENSSSCG00000002836	SALL1	100	67.289	ENSMALG00000013400	sall1a	100	67.090	Monopterus_albus
ENSSSCG00000002836	SALL1	100	88.847	MGP_CAROLIEiJ_G0031362	Sall1	100	88.696	Mus_caroli
ENSSSCG00000002836	SALL1	100	88.470	ENSMUSG00000031665	Sall1	100	88.621	Mus_musculus
ENSSSCG00000002836	SALL1	100	88.018	MGP_PahariEiJ_G0022961	Sall1	100	88.018	Mus_pahari
ENSSSCG00000002836	SALL1	100	88.470	MGP_SPRETEiJ_G0032480	Sall1	100	88.621	Mus_spretus
ENSSSCG00000002836	SALL1	98	90.031	ENSMPUG00000003265	SALL1	97	89.530	Mustela_putorius_furo
ENSSSCG00000002836	SALL1	98	84.897	ENSMLUG00000015541	SALL1	100	85.507	Myotis_lucifugus
ENSSSCG00000002836	SALL1	100	67.091	ENSNBRG00000009307	sall1a	99	67.016	Neolamprologus_brichardi
ENSSSCG00000002836	SALL1	94	96.667	ENSNLEG00000001008	SALL1	100	96.667	Nomascus_leucogenys
ENSSSCG00000002836	SALL1	100	87.255	ENSMEUG00000012206	SALL1	100	86.878	Notamacropus_eugenii
ENSSSCG00000002836	SALL1	87	94.659	ENSOPRG00000005645	SALL1	72	94.659	Ochotona_princeps
ENSSSCG00000002836	SALL1	100	91.327	ENSODEG00000003685	SALL1	100	91.252	Octodon_degus
ENSSSCG00000002836	SALL1	100	67.115	ENSONIG00000002831	sall1a	99	66.815	Oreochromis_niloticus
ENSSSCG00000002836	SALL1	80	84.969	ENSOANG00000013399	SALL1	79	84.969	Ornithorhynchus_anatinus
ENSSSCG00000002836	SALL1	100	66.841	ENSORLG00000013827	sall1a	100	66.791	Oryzias_latipes
ENSSSCG00000002836	SALL1	100	66.841	ENSORLG00020020570	sall1a	100	66.791	Oryzias_latipes_hni
ENSSSCG00000002836	SALL1	100	66.916	ENSORLG00015018830	sall1a	100	66.766	Oryzias_latipes_hsok
ENSSSCG00000002836	SALL1	100	66.766	ENSOMEG00000016043	sall1a	99	66.828	Oryzias_melastigma
ENSSSCG00000002836	SALL1	100	91.353	ENSOGAG00000027316	SALL1	100	91.403	Otolemur_garnettii
ENSSSCG00000002836	SALL1	100	87.416	ENSOARG00000017583	SALL1	100	86.891	Ovis_aries
ENSSSCG00000002836	SALL1	99	91.781	ENSPPAG00000035657	SALL1	100	92.314	Pan_paniscus
ENSSSCG00000002836	SALL1	100	67.949	ENSPPAG00000035136	-	99	68.764	Pan_paniscus
ENSSSCG00000002836	SALL1	100	91.121	ENSPPRG00000023283	SALL1	100	90.895	Panthera_pardus
ENSSSCG00000002836	SALL1	89	95.627	ENSPTIG00000013539	-	84	95.627	Panthera_tigris_altaica
ENSSSCG00000002836	SALL1	96	69.545	ENSPTRG00000045256	-	98	69.357	Pan_troglodytes
ENSSSCG00000002836	SALL1	100	92.464	ENSPTRG00000008108	SALL1	100	92.464	Pan_troglodytes
ENSSSCG00000002836	SALL1	100	93.067	ENSPANG00000024176	SALL1	100	92.690	Papio_anubis
ENSSSCG00000002836	SALL1	100	64.895	ENSPKIG00000005383	-	99	64.613	Paramormyrops_kingsleyae
ENSSSCG00000002836	SALL1	100	65.894	ENSPKIG00000022251	sall1a	99	65.569	Paramormyrops_kingsleyae
ENSSSCG00000002836	SALL1	100	84.012	ENSPSIG00000008582	SALL1	99	83.396	Pelodiscus_sinensis
ENSSSCG00000002836	SALL1	100	65.066	ENSPMGG00000021788	sall1a	100	64.433	Periophthalmus_magnuspinnatus
ENSSSCG00000002836	SALL1	96	54.098	ENSPMAG00000008148	sall1b	88	54.782	Petromyzon_marinus
ENSSSCG00000002836	SALL1	100	87.481	ENSPCIG00000017840	SALL1	100	87.104	Phascolarctos_cinereus
ENSSSCG00000002836	SALL1	97	67.127	ENSPFOG00000015799	sall1a	95	67.178	Poecilia_formosa
ENSSSCG00000002836	SALL1	100	66.841	ENSPLAG00000022539	sall1a	99	66.890	Poecilia_latipinna
ENSSSCG00000002836	SALL1	100	66.916	ENSPMEG00000020894	sall1a	99	66.841	Poecilia_mexicana
ENSSSCG00000002836	SALL1	100	66.841	ENSPREG00000006802	sall1a	99	66.766	Poecilia_reticulata
ENSSSCG00000002836	SALL1	99	90.612	ENSPPYG00000007345	SALL1	98	90.204	Pongo_abelii
ENSSSCG00000002836	SALL1	90	95.122	ENSPCAG00000008162	SALL1	92	94.737	Procavia_capensis
ENSSSCG00000002836	SALL1	100	91.478	ENSPCOG00000028192	SALL1	100	91.327	Propithecus_coquereli
ENSSSCG00000002836	SALL1	68	90.898	ENSPVAG00000015374	SALL1	100	91.599	Pteropus_vampyrus
ENSSSCG00000002836	SALL1	100	67.016	ENSPNYG00000010865	sall1a	99	67.016	Pundamilia_nyererei
ENSSSCG00000002836	SALL1	99	53.234	ENSPNAG00000007442	sall1b	99	52.823	Pygocentrus_nattereri
ENSSSCG00000002836	SALL1	100	66.518	ENSPNAG00000023644	sall1a	99	65.894	Pygocentrus_nattereri
ENSSSCG00000002836	SALL1	100	88.195	ENSRNOG00000013907	Sall1	100	88.404	Rattus_norvegicus
ENSSSCG00000002836	SALL1	93	93.171	ENSRBIG00000015707	SALL1	100	92.927	Rhinopithecus_bieti
ENSSSCG00000002836	SALL1	99	92.237	ENSRROG00000035777	SALL1	100	92.927	Rhinopithecus_roxellana
ENSSSCG00000002836	SALL1	100	92.389	ENSSBOG00000032186	SALL1	100	92.163	Saimiri_boliviensis_boliviensis
ENSSSCG00000002836	SALL1	100	86.802	ENSSHAG00000009477	SALL1	100	86.727	Sarcophilus_harrisii
ENSSSCG00000002836	SALL1	100	65.973	ENSSFOG00015020020	sall1a	99	65.997	Scleropages_formosus
ENSSSCG00000002836	SALL1	98	66.972	ENSSFOG00015001590	sall1a	99	66.641	Scleropages_formosus
ENSSSCG00000002836	SALL1	100	67.513	ENSSMAG00000009160	sall1a	100	67.164	Scophthalmus_maximus
ENSSSCG00000002836	SALL1	100	67.961	ENSSDUG00000006507	sall1a	100	67.578	Seriola_dumerili
ENSSSCG00000002836	SALL1	98	57.143	ENSSDUG00000000748	sall1b	91	59.184	Seriola_dumerili
ENSSSCG00000002836	SALL1	100	68.036	ENSSLDG00000017721	sall1a	100	67.537	Seriola_lalandi_dorsalis
ENSSSCG00000002836	SALL1	58	72.340	ENSSLDG00000014465	-	87	72.340	Seriola_lalandi_dorsalis
ENSSSCG00000002836	SALL1	98	90.184	ENSSARG00000000661	SALL1	100	89.877	Sorex_araneus
ENSSSCG00000002836	SALL1	100	84.389	ENSSPUG00000000156	SALL1	99	83.774	Sphenodon_punctatus
ENSSSCG00000002836	SALL1	100	68.033	ENSSPAG00000021615	sall1a	99	67.860	Stegastes_partitus
ENSSSCG00000002836	SALL1	100	84.314	ENSTGUG00000007514	SALL1	99	83.698	Taeniopygia_guttata
ENSSSCG00000002836	SALL1	97	64.824	ENSTRUG00000008950	sall1a	100	65.363	Takifugu_rubripes
ENSSSCG00000002836	SALL1	97	63.463	ENSTNIG00000004257	sall1a	100	64.658	Tetraodon_nigroviridis
ENSSSCG00000002836	SALL1	77	100.000	ENSTBEG00000002119	-	55	100.000	Tupaia_belangeri
ENSSSCG00000002836	SALL1	97	91.206	ENSUAMG00000023379	-	93	91.122	Ursus_americanus
ENSSSCG00000002836	SALL1	96	91.378	ENSVVUG00000019383	-	99	91.547	Vulpes_vulpes
ENSSSCG00000002836	SALL1	100	75.294	ENSXETG00000018417	sall1	99	75.276	Xenopus_tropicalis
ENSSSCG00000002836	SALL1	73	61.538	ENSXETG00000017176	sall2	60	61.538	Xenopus_tropicalis
ENSSSCG00000002836	SALL1	100	66.766	ENSXMAG00000016273	sall1a	99	66.747	Xiphophorus_maculatus