EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000002857 (Gene tree)
Gene ID: 102162257
Gene Symbol: -
Alias: -
Full Name: tudor domain containing 12
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 56416 bases
Position: chr6:42608307-42664722
Accession: 102162257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000003077	TUDOR	PF00567.24	1e-05	1	1
ENSSSCP00000003077	DEAD	PF00270.29	8.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000003158	-	3051	XM_013988548	ENSSSCP00000003077	1016 (aa)	XP_013844002	F1RNY5

Gene Model

Click here to download ENSSSCG00000002857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000002857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000002857	-	71	42.936	ENSAPOG00000006421	tdrd12	70	42.936	Acanthochromis_polyacanthus
ENSSSCG00000002857	-	81	84.249	ENSAMEG00000015440	-	100	84.249	Ailuropoda_melanoleuca
ENSSSCG00000002857	-	71	42.521	ENSACIG00000021652	tdrd12	71	42.521	Amphilophus_citrinellus
ENSSSCG00000002857	-	67	42.544	ENSAOCG00000016463	tdrd12	58	42.398	Amphiprion_ocellaris
ENSSSCG00000002857	-	67	44.152	ENSAPEG00000015105	tdrd12	66	44.006	Amphiprion_percula
ENSSSCG00000002857	-	71	43.015	ENSATEG00000011608	tdrd12	72	43.015	Anabas_testudineus
ENSSSCG00000002857	-	91	52.581	ENSAPLG00000011417	-	85	52.581	Anas_platyrhynchos
ENSSSCG00000002857	-	75	54.485	ENSACAG00000029615	-	77	54.485	Anolis_carolinensis
ENSSSCG00000002857	-	96	78.721	ENSANAG00000023166	-	85	78.721	Aotus_nancymaae
ENSSSCG00000002857	-	74	45.974	ENSAMXG00000013811	tdrd12	74	45.974	Astyanax_mexicanus
ENSSSCG00000002857	-	96	78.643	ENSCJAG00000000763	-	85	78.643	Callithrix_jacchus
ENSSSCG00000002857	-	98	81.755	ENSCAFG00000007505	TDRD12	76	81.755	Canis_familiaris
ENSSSCG00000002857	-	98	81.755	ENSCAFG00020019790	-	83	80.957	Canis_lupus_dingo
ENSSSCG00000002857	-	96	78.863	ENSTSYG00000012034	-	85	78.863	Carlito_syrichta
ENSSSCG00000002857	-	89	74.345	ENSCPOG00000002876	-	74	74.345	Cavia_porcellus
ENSSSCG00000002857	-	96	78.543	ENSCCAG00000037592	-	88	78.543	Cebus_capucinus
ENSSSCG00000002857	-	93	78.747	ENSCATG00000038627	-	85	78.747	Cercocebus_atys
ENSSSCG00000002857	-	98	76.984	ENSCLAG00000012138	-	78	76.587	Chinchilla_lanigera
ENSSSCG00000002857	-	96	78.785	ENSCSAG00000004794	-	85	78.785	Chlorocebus_sabaeus
ENSSSCG00000002857	-	80	64.028	ENSCPBG00000000147	-	78	64.028	Chrysemys_picta_bellii
ENSSSCG00000002857	-	96	76.148	ENSCANG00000040785	-	84	76.148	Colobus_angolensis_palliatus
ENSSSCG00000002857	-	90	74.160	ENSCGRG00001021407	-	74	74.160	Cricetulus_griseus_chok1gshd
ENSSSCG00000002857	-	90	73.902	ENSCGRG00000007286	-	76	73.902	Cricetulus_griseus_crigri
ENSSSCG00000002857	-	73	40.216	ENSCSEG00000001744	-	58	40.216	Cynoglossus_semilaevis
ENSSSCG00000002857	-	67	42.044	ENSCVAG00000004277	tdrd12	92	41.983	Cyprinodon_variegatus
ENSSSCG00000002857	-	93	40.186	ENSDARG00000075217	tdrd12	68	44.198	Danio_rerio
ENSSSCG00000002857	-	98	82.164	ENSDNOG00000017244	-	76	82.164	Dasypus_novemcinctus
ENSSSCG00000002857	-	89	69.982	ENSDORG00000012134	-	73	69.982	Dipodomys_ordii
ENSSSCG00000002857	-	66	76.344	ENSETEG00000015088	-	74	76.344	Echinops_telfairi
ENSSSCG00000002857	-	98	78.916	ENSEASG00005021053	-	74	78.916	Equus_asinus_asinus
ENSSSCG00000002857	-	90	80.984	ENSEEUG00000008457	-	83	80.984	Erinaceus_europaeus
ENSSSCG00000002857	-	98	39.300	ENSELUG00000017494	tdrd12	74	39.100	Esox_lucius
ENSSSCG00000002857	-	94	43.908	ENSFALG00000000259	-	70	43.908	Ficedula_albicollis
ENSSSCG00000002857	-	90	72.727	ENSFDAG00000014797	-	74	72.680	Fukomys_damarensis
ENSSSCG00000002857	-	81	55.838	ENSGALG00000004704	-	72	56.873	Gallus_gallus
ENSSSCG00000002857	-	77	51.923	ENSGAFG00000003729	tdrd12	57	51.923	Gambusia_affinis
ENSSSCG00000002857	-	82	62.784	ENSGAGG00000000247	-	77	64.216	Gopherus_agassizii
ENSSSCG00000002857	-	96	79.142	ENSGGOG00000011938	-	86	78.942	Gorilla_gorilla
ENSSSCG00000002857	-	68	44.380	ENSHBUG00000020426	tdrd12	69	44.380	Haplochromis_burtoni
ENSSSCG00000002857	-	90	72.610	ENSHGLG00000015608	-	73	76.963	Heterocephalus_glaber_female
ENSSSCG00000002857	-	93	78.132	ENSHGLG00100008227	-	85	78.049	Heterocephalus_glaber_male
ENSSSCG00000002857	-	75	55.814	ENSIPUG00000016825	tdrd12	57	55.814	Ictalurus_punctatus
ENSSSCG00000002857	-	90	79.266	ENSSTOG00000013638	-	75	79.266	Ictidomys_tridecemlineatus
ENSSSCG00000002857	-	64	43.969	ENSKMAG00000008031	tdrd12	75	43.969	Kryptolebias_marmoratus
ENSSSCG00000002857	-	76	41.439	ENSLBEG00000005601	tdrd12	75	41.439	Labrus_bergylta
ENSSSCG00000002857	-	92	50.105	ENSLACG00000010650	-	85	49.319	Latimeria_chalumnae
ENSSSCG00000002857	-	92	41.023	ENSLOCG00000001690	tdrd12	57	50.000	Lepisosteus_oculatus
ENSSSCG00000002857	-	92	83.015	ENSLAFG00000008698	-	85	83.015	Loxodonta_africana
ENSSSCG00000002857	-	96	79.142	ENSMFAG00000044756	-	85	79.142	Macaca_fascicularis
ENSSSCG00000002857	-	98	78.571	ENSMMUG00000015608	-	86	79.142	Macaca_mulatta
ENSSSCG00000002857	-	96	79.242	ENSMNEG00000043067	-	86	79.042	Macaca_nemestrina
ENSSSCG00000002857	-	92	78.455	ENSMLEG00000042036	-	85	78.455	Mandrillus_leucophaeus
ENSSSCG00000002857	-	71	41.417	ENSMAMG00000013867	tdrd12	68	41.417	Mastacembelus_armatus
ENSSSCG00000002857	-	70	43.521	ENSMZEG00005024214	tdrd12	71	43.521	Maylandia_zebra
ENSSSCG00000002857	-	68	56.214	ENSMGAG00000005627	-	100	56.214	Meleagris_gallopavo
ENSSSCG00000002857	-	89	73.514	ENSMAUG00000013767	-	74	73.514	Mesocricetus_auratus
ENSSSCG00000002857	-	96	82.125	ENSMICG00000003623	-	86	82.125	Microcebus_murinus
ENSSSCG00000002857	-	93	77.143	ENSMOCG00000002366	-	85	77.143	Microtus_ochrogaster
ENSSSCG00000002857	-	77	42.936	ENSMMOG00000018662	tdrd12	77	42.936	Mola_mola
ENSSSCG00000002857	-	97	67.882	ENSMODG00000012286	-	73	67.781	Monodelphis_domestica
ENSSSCG00000002857	-	70	41.328	ENSMALG00000006918	tdrd12	60	41.328	Monopterus_albus
ENSSSCG00000002857	-	96	76.626	MGP_CAROLIEiJ_G0029587	-	86	76.626	Mus_caroli
ENSSSCG00000002857	-	96	76.118	MGP_PahariEiJ_G0012821	-	86	76.118	Mus_pahari
ENSSSCG00000002857	-	96	76.994	MGP_SPRETEiJ_G0030686	-	85	76.994	Mus_spretus
ENSSSCG00000002857	-	98	80.896	ENSMPUG00000007791	-	77	80.896	Mustela_putorius_furo
ENSSSCG00000002857	-	84	84.280	ENSMLUG00000010694	-	84	84.280	Myotis_lucifugus
ENSSSCG00000002857	-	89	76.053	ENSNGAG00000000793	-	74	76.053	Nannospalax_galili
ENSSSCG00000002857	-	68	42.795	ENSNBRG00000017878	-	97	42.795	Neolamprologus_brichardi
ENSSSCG00000002857	-	92	77.353	ENSNLEG00000007635	-	84	77.353	Nomascus_leucogenys
ENSSSCG00000002857	-	84	70.744	ENSOPRG00000015809	-	77	70.744	Ochotona_princeps
ENSSSCG00000002857	-	88	72.727	ENSODEG00000014443	-	73	72.727	Octodon_degus
ENSSSCG00000002857	-	92	39.297	ENSONIG00000010630	tdrd12	85	39.297	Oreochromis_niloticus
ENSSSCG00000002857	-	52	62.313	ENSOANG00000029707	-	78	62.313	Ornithorhynchus_anatinus
ENSSSCG00000002857	-	90	74.188	ENSOCUG00000016911	-	74	74.188	Oryctolagus_cuniculus
ENSSSCG00000002857	-	67	41.314	ENSORLG00000027859	tdrd12	62	39.973	Oryzias_latipes
ENSSSCG00000002857	-	71	40.828	ENSORLG00015020835	tdrd12	51	40.828	Oryzias_latipes_hsok
ENSSSCG00000002857	-	67	42.274	ENSOMEG00000021862	tdrd12	66	42.274	Oryzias_melastigma
ENSSSCG00000002857	-	93	81.972	ENSOGAG00000001571	-	85	81.972	Otolemur_garnettii
ENSSSCG00000002857	-	98	84.363	ENSOARG00000004254	-	76	84.363	Ovis_aries
ENSSSCG00000002857	-	96	77.445	ENSPPAG00000042284	-	86	77.445	Pan_paniscus
ENSSSCG00000002857	-	96	81.313	ENSPPRG00000002389	-	85	81.313	Panthera_pardus
ENSSSCG00000002857	-	96	78.942	ENSPTRG00000010795	TDRD12	88	78.942	Pan_troglodytes
ENSSSCG00000002857	-	98	78.474	ENSPANG00000001203	-	85	79.242	Papio_anubis
ENSSSCG00000002857	-	98	37.512	ENSPKIG00000006407	tdrd12	61	44.430	Paramormyrops_kingsleyae
ENSSSCG00000002857	-	85	58.154	ENSPSIG00000012970	-	83	58.154	Pelodiscus_sinensis
ENSSSCG00000002857	-	67	42.669	ENSPMGG00000022691	tdrd12	68	42.669	Periophthalmus_magnuspinnatus
ENSSSCG00000002857	-	93	80.042	ENSPEMG00000009233	-	84	80.042	Peromyscus_maniculatus_bairdii
ENSSSCG00000002857	-	98	64.718	ENSPCIG00000020993	-	76	64.506	Phascolarctos_cinereus
ENSSSCG00000002857	-	76	56.522	ENSPFOG00000008184	tdrd12	57	56.522	Poecilia_formosa
ENSSSCG00000002857	-	59	43.443	ENSPMEG00000006420	tdrd12	73	43.443	Poecilia_mexicana
ENSSSCG00000002857	-	77	50.000	ENSPREG00000004916	tdrd12	72	50.000	Poecilia_reticulata
ENSSSCG00000002857	-	98	78.474	ENSPPYG00000009821	-	85	78.474	Pongo_abelii
ENSSSCG00000002857	-	77	70.463	ENSPCAG00000013510	-	71	70.463	Procavia_capensis
ENSSSCG00000002857	-	93	78.844	ENSPCOG00000023600	-	84	78.947	Propithecus_coquereli
ENSSSCG00000002857	-	87	89.655	ENSPVAG00000014599	-	79	89.655	Pteropus_vampyrus
ENSSSCG00000002857	-	68	44.236	ENSPNYG00000022866	tdrd12	68	44.236	Pundamilia_nyererei
ENSSSCG00000002857	-	74	45.190	ENSPNAG00000003413	tdrd12	72	45.190	Pygocentrus_nattereri
ENSSSCG00000002857	-	98	78.022	ENSRNOG00000012719	Tdrd12	76	78.022	Rattus_norvegicus
ENSSSCG00000002857	-	96	73.413	ENSRBIG00000019899	-	86	73.413	Rhinopithecus_bieti
ENSSSCG00000002857	-	96	78.743	ENSRROG00000036351	-	85	78.743	Rhinopithecus_roxellana
ENSSSCG00000002857	-	96	79.341	ENSSBOG00000034916	-	85	79.341	Saimiri_boliviensis_boliviensis
ENSSSCG00000002857	-	93	68.586	ENSSHAG00000002599	-	85	68.526	Sarcophilus_harrisii
ENSSSCG00000002857	-	65	44.662	ENSSFOG00015000297	tdrd12	61	44.361	Scleropages_formosus
ENSSSCG00000002857	-	71	42.700	ENSSMAG00000002870	tdrd12	69	42.700	Scophthalmus_maximus
ENSSSCG00000002857	-	74	45.044	ENSSDUG00000017304	tdrd12	74	45.044	Seriola_dumerili
ENSSSCG00000002857	-	67	44.752	ENSSLDG00000004415	tdrd12	69	44.752	Seriola_lalandi_dorsalis
ENSSSCG00000002857	-	91	77.478	ENSSARG00000005357	-	85	77.478	Sorex_araneus
ENSSSCG00000002857	-	88	56.848	ENSSPUG00000013174	-	85	57.230	Sphenodon_punctatus
ENSSSCG00000002857	-	74	55.102	ENSSPAG00000005706	tdrd12	79	55.102	Stegastes_partitus
ENSSSCG00000002857	-	65	51.360	ENSTGUG00000009121	-	99	52.510	Taeniopygia_guttata
ENSSSCG00000002857	-	71	37.139	ENSTRUG00000021888	tdrd12	74	37.139	Takifugu_rubripes
ENSSSCG00000002857	-	72	84.990	ENSTBEG00000007609	-	67	84.990	Tupaia_belangeri
ENSSSCG00000002857	-	93	87.049	ENSTTRG00000012206	-	86	87.049	Tursiops_truncatus
ENSSSCG00000002857	-	96	82.508	ENSUAMG00000007298	-	84	82.508	Ursus_americanus
ENSSSCG00000002857	-	96	82.508	ENSUMAG00000014314	-	84	82.508	Ursus_maritimus
ENSSSCG00000002857	-	87	77.149	ENSVPAG00000012051	-	85	76.697	Vicugna_pacos
ENSSSCG00000002857	-	98	81.972	ENSVVUG00000016637	-	79	81.972	Vulpes_vulpes
ENSSSCG00000002857	-	63	45.376	ENSXETG00000031945	-	75	45.376	Xenopus_tropicalis
ENSSSCG00000002857	-	83	43.604	ENSXMAG00000020908	tdrd12	82	43.604	Xiphophorus_maculatus