EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000002865 (Gene tree)
Gene ID: 100525924
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 39006 bases
Position: chr6:42895543-42934548
Accession: 100525924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000003085	DUF1604	PF07713.13	1.6e-35	1	1
ENSSSCP00000003085	G-patch	PF01585.23	6.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000003166	GPATCH1-201	2709	XM_021094288	ENSSSCP00000003085	902 (aa)	XP_020949947	F1RNW7

Gene Model

Click here to download ENSSSCG00000002865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000002865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000002865	GPATCH1	94	88.118	ENSG00000076650	GPATCH1	91	88.118	Homo_sapiens
ENSSSCG00000002865	GPATCH1	94	91.048	ENSAMEG00000015575	GPATCH1	91	91.048	Ailuropoda_melanoleuca
ENSSSCG00000002865	GPATCH1	84	70.718	ENSAOCG00000006668	gpatch1	77	70.718	Amphiprion_ocellaris
ENSSSCG00000002865	GPATCH1	84	55.527	ENSAPEG00000000026	gpatch1	90	52.134	Amphiprion_percula
ENSSSCG00000002865	GPATCH1	92	51.259	ENSATEG00000014494	gpatch1	90	52.109	Anabas_testudineus
ENSSSCG00000002865	GPATCH1	93	62.905	ENSAPLG00000007584	GPATCH1	96	61.795	Anas_platyrhynchos
ENSSSCG00000002865	GPATCH1	94	87.412	ENSANAG00000027002	GPATCH1	91	87.412	Aotus_nancymaae
ENSSSCG00000002865	GPATCH1	84	53.699	ENSACLG00000024740	gpatch1	82	53.808	Astatotilapia_calliptera
ENSSSCG00000002865	GPATCH1	93	52.799	ENSAMXG00000020177	gpatch1	97	51.957	Astyanax_mexicanus
ENSSSCG00000002865	GPATCH1	94	92.471	ENSBTAG00000000721	GPATCH1	91	92.471	Bos_taurus
ENSSSCG00000002865	GPATCH1	70	30.816	WBGene00011109	R07E5.1	76	30.041	Caenorhabditis_elegans
ENSSSCG00000002865	GPATCH1	94	86.941	ENSCJAG00000000684	GPATCH1	91	86.941	Callithrix_jacchus
ENSSSCG00000002865	GPATCH1	94	90.353	ENSCAFG00000007457	GPATCH1	76	90.353	Canis_familiaris
ENSSSCG00000002865	GPATCH1	98	90.136	ENSCAFG00020019731	GPATCH1	95	90.136	Canis_lupus_dingo
ENSSSCG00000002865	GPATCH1	94	92.824	ENSCHIG00000019626	GPATCH1	92	92.824	Capra_hircus
ENSSSCG00000002865	GPATCH1	91	79.758	ENSCAPG00000008827	GPATCH1	91	80.266	Cavia_aperea
ENSSSCG00000002865	GPATCH1	94	82.512	ENSCPOG00000024477	GPATCH1	91	82.981	Cavia_porcellus
ENSSSCG00000002865	GPATCH1	94	87.176	ENSCCAG00000024676	GPATCH1	91	87.176	Cebus_capucinus
ENSSSCG00000002865	GPATCH1	94	87.765	ENSCATG00000043637	GPATCH1	91	87.765	Cercocebus_atys
ENSSSCG00000002865	GPATCH1	92	82.933	ENSCLAG00000003395	-	92	83.171	Chinchilla_lanigera
ENSSSCG00000002865	GPATCH1	94	85.311	ENSCSAG00000004743	GPATCH1	91	85.311	Chlorocebus_sabaeus
ENSSSCG00000002865	GPATCH1	85	80.285	ENSCHOG00000012865	GPATCH1	89	80.285	Choloepus_hoffmanni
ENSSSCG00000002865	GPATCH1	81	69.631	ENSCPBG00000000666	GPATCH1	92	69.631	Chrysemys_picta_bellii
ENSSSCG00000002865	GPATCH1	95	34.312	ENSCING00000012518	-	90	34.777	Ciona_intestinalis
ENSSSCG00000002865	GPATCH1	84	84.211	ENSCANG00000012540	GPATCH1	90	84.211	Colobus_angolensis_palliatus
ENSSSCG00000002865	GPATCH1	91	83.353	ENSCGRG00001016736	Gpatch1	91	83.353	Cricetulus_griseus_chok1gshd
ENSSSCG00000002865	GPATCH1	91	68.639	ENSCGRG00000005069	Gpatch1	90	68.639	Cricetulus_griseus_crigri
ENSSSCG00000002865	GPATCH1	80	51.441	ENSCSEG00000019456	-	84	63.303	Cynoglossus_semilaevis
ENSSSCG00000002865	GPATCH1	95	50.108	ENSDARG00000033418	gpatch1	93	50.758	Danio_rerio
ENSSSCG00000002865	GPATCH1	99	85.843	ENSDNOG00000005291	GPATCH1	99	85.843	Dasypus_novemcinctus
ENSSSCG00000002865	GPATCH1	98	79.478	ENSDORG00000012546	Gpatch1	95	79.882	Dipodomys_ordii
ENSSSCG00000002865	GPATCH1	85	32.321	FBgn0036386	CG8833	67	33.623	Drosophila_melanogaster
ENSSSCG00000002865	GPATCH1	94	76.706	ENSETEG00000003626	GPATCH1	92	76.706	Echinops_telfairi
ENSSSCG00000002865	GPATCH1	97	37.296	ENSEBUG00000011286	gpatch1	92	37.255	Eptatretus_burgeri
ENSSSCG00000002865	GPATCH1	94	90.047	ENSEASG00005021162	GPATCH1	93	90.932	Equus_asinus_asinus
ENSSSCG00000002865	GPATCH1	99	88.606	ENSECAG00000022743	GPATCH1	88	90.695	Equus_caballus
ENSSSCG00000002865	GPATCH1	80	78.431	ENSEEUG00000012925	GPATCH1	77	78.392	Erinaceus_europaeus
ENSSSCG00000002865	GPATCH1	93	49.549	ENSELUG00000018195	gpatch1	90	49.667	Esox_lucius
ENSSSCG00000002865	GPATCH1	94	90.342	ENSFCAG00000014917	GPATCH1	91	90.342	Felis_catus
ENSSSCG00000002865	GPATCH1	95	63.451	ENSFALG00000007821	GPATCH1	89	63.882	Ficedula_albicollis
ENSSSCG00000002865	GPATCH1	91	82.646	ENSFDAG00000003871	GPATCH1	92	82.888	Fukomys_damarensis
ENSSSCG00000002865	GPATCH1	91	51.740	ENSGMOG00000003830	gpatch1	95	51.044	Gadus_morhua
ENSSSCG00000002865	GPATCH1	96	64.351	ENSGALG00000004839	GPATCH1	93	64.497	Gallus_gallus
ENSSSCG00000002865	GPATCH1	92	50.236	ENSGACG00000017544	gpatch1	94	49.826	Gasterosteus_aculeatus
ENSSSCG00000002865	GPATCH1	94	65.845	ENSGAGG00000010067	GPATCH1	91	65.610	Gopherus_agassizii
ENSSSCG00000002865	GPATCH1	92	87.290	ENSGGOG00000010862	GPATCH1	91	88.000	Gorilla_gorilla
ENSSSCG00000002865	GPATCH1	96	48.945	ENSHBUG00000023462	gpatch1	95	50.763	Haplochromis_burtoni
ENSSSCG00000002865	GPATCH1	94	84.724	ENSHGLG00000009334	GPATCH1	91	84.841	Heterocephalus_glaber_female
ENSSSCG00000002865	GPATCH1	94	84.841	ENSHGLG00100018074	GPATCH1	91	84.959	Heterocephalus_glaber_male
ENSSSCG00000002865	GPATCH1	96	52.533	ENSIPUG00000014977	gpatch1	90	52.740	Ictalurus_punctatus
ENSSSCG00000002865	GPATCH1	94	87.059	ENSSTOG00000003720	GPATCH1	91	87.059	Ictidomys_tridecemlineatus
ENSSSCG00000002865	GPATCH1	94	83.628	ENSJJAG00000023765	Gpatch1	91	83.628	Jaculus_jaculus
ENSSSCG00000002865	GPATCH1	92	51.744	ENSKMAG00000017950	gpatch1	89	51.684	Kryptolebias_marmoratus
ENSSSCG00000002865	GPATCH1	84	53.250	ENSLBEG00000026527	gpatch1	88	51.178	Labrus_bergylta
ENSSSCG00000002865	GPATCH1	91	58.802	ENSLACG00000008130	GPATCH1	90	58.944	Latimeria_chalumnae
ENSSSCG00000002865	GPATCH1	84	58.312	ENSLOCG00000001800	gpatch1	90	56.207	Lepisosteus_oculatus
ENSSSCG00000002865	GPATCH1	94	87.986	ENSLAFG00000013589	GPATCH1	94	87.908	Loxodonta_africana
ENSSSCG00000002865	GPATCH1	93	87.767	ENSMFAG00000034418	GPATCH1	95	87.767	Macaca_fascicularis
ENSSSCG00000002865	GPATCH1	94	87.427	ENSMMUG00000011790	GPATCH1	92	87.427	Macaca_mulatta
ENSSSCG00000002865	GPATCH1	94	87.176	ENSMNEG00000045084	GPATCH1	91	87.176	Macaca_nemestrina
ENSSSCG00000002865	GPATCH1	94	75.647	ENSMLEG00000043840	GPATCH1	90	75.647	Mandrillus_leucophaeus
ENSSSCG00000002865	GPATCH1	84	53.571	ENSMZEG00005001926	gpatch1	83	53.686	Maylandia_zebra
ENSSSCG00000002865	GPATCH1	92	65.789	ENSMGAG00000005775	GPATCH1	89	64.833	Meleagris_gallopavo
ENSSSCG00000002865	GPATCH1	93	79.717	ENSMICG00000004829	GPATCH1	93	80.307	Microcebus_murinus
ENSSSCG00000002865	GPATCH1	94	83.255	ENSMOCG00000000174	Gpatch1	92	83.255	Microtus_ochrogaster
ENSSSCG00000002865	GPATCH1	84	51.646	ENSMMOG00000002140	gpatch1	87	52.278	Mola_mola
ENSSSCG00000002865	GPATCH1	94	75.529	ENSMODG00000012226	GPATCH1	90	75.294	Monodelphis_domestica
ENSSSCG00000002865	GPATCH1	84	53.248	ENSMALG00000014386	gpatch1	90	50.404	Monopterus_albus
ENSSSCG00000002865	GPATCH1	96	85.284	ENSMUSG00000063808	Gpatch1	100	94.898	Mus_musculus
ENSSSCG00000002865	GPATCH1	96	84.971	MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	Mus_pahari
ENSSSCG00000002865	GPATCH1	96	84.722	MGP_SPRETEiJ_G0030681	Gpatch1	100	95.918	Mus_spretus
ENSSSCG00000002865	GPATCH1	94	89.753	ENSMPUG00000007658	GPATCH1	91	89.753	Mustela_putorius_furo
ENSSSCG00000002865	GPATCH1	94	89.282	ENSMLUG00000012161	GPATCH1	91	89.282	Myotis_lucifugus
ENSSSCG00000002865	GPATCH1	94	84.923	ENSNGAG00000012455	Gpatch1	91	84.923	Nannospalax_galili
ENSSSCG00000002865	GPATCH1	94	87.765	ENSNLEG00000007659	GPATCH1	91	87.765	Nomascus_leucogenys
ENSSSCG00000002865	GPATCH1	81	67.575	ENSMEUG00000015174	GPATCH1	79	67.575	Notamacropus_eugenii
ENSSSCG00000002865	GPATCH1	94	81.564	ENSODEG00000007103	GPATCH1	91	82.497	Octodon_degus
ENSSSCG00000002865	GPATCH1	84	55.685	ENSONIG00000003302	gpatch1	91	54.225	Oreochromis_niloticus
ENSSSCG00000002865	GPATCH1	96	72.821	ENSOANG00000012732	GPATCH1	91	74.000	Ornithorhynchus_anatinus
ENSSSCG00000002865	GPATCH1	94	88.457	ENSOCUG00000015905	GPATCH1	91	88.928	Oryctolagus_cuniculus
ENSSSCG00000002865	GPATCH1	92	51.358	ENSORLG00000018706	gpatch1	88	51.358	Oryzias_latipes
ENSSSCG00000002865	GPATCH1	92	49.651	ENSOMEG00000022688	gpatch1	90	49.712	Oryzias_melastigma
ENSSSCG00000002865	GPATCH1	88	88.608	ENSOGAG00000004016	GPATCH1	99	88.636	Otolemur_garnettii
ENSSSCG00000002865	GPATCH1	93	92.052	ENSOARG00000004365	GPATCH1	91	92.052	Ovis_aries
ENSSSCG00000002865	GPATCH1	94	87.529	ENSPPAG00000020990	GPATCH1	91	87.529	Pan_paniscus
ENSSSCG00000002865	GPATCH1	94	90.459	ENSPPRG00000017245	GPATCH1	91	90.459	Panthera_pardus
ENSSSCG00000002865	GPATCH1	94	91.284	ENSPTIG00000019649	GPATCH1	91	91.284	Panthera_tigris_altaica
ENSSSCG00000002865	GPATCH1	94	87.647	ENSPTRG00000010803	GPATCH1	91	87.647	Pan_troglodytes
ENSSSCG00000002865	GPATCH1	94	87.529	ENSPANG00000012374	GPATCH1	95	87.529	Papio_anubis
ENSSSCG00000002865	GPATCH1	84	57.599	ENSPKIG00000020745	gpatch1	90	53.897	Paramormyrops_kingsleyae
ENSSSCG00000002865	GPATCH1	94	64.726	ENSPSIG00000013433	GPATCH1	91	64.843	Pelodiscus_sinensis
ENSSSCG00000002865	GPATCH1	94	84.452	ENSPEMG00000000636	Gpatch1	91	84.452	Peromyscus_maniculatus_bairdii
ENSSSCG00000002865	GPATCH1	94	75.825	ENSPCIG00000021003	GPATCH1	95	75.825	Phascolarctos_cinereus
ENSSSCG00000002865	GPATCH1	75	48.921	ENSPREG00000008264	gpatch1	98	44.931	Poecilia_reticulata
ENSSSCG00000002865	GPATCH1	94	84.588	ENSPPYG00000009824	GPATCH1	91	84.588	Pongo_abelii
ENSSSCG00000002865	GPATCH1	86	78.436	ENSPCAG00000005931	GPATCH1	84	78.520	Procavia_capensis
ENSSSCG00000002865	GPATCH1	96	82.509	ENSPCOG00000009674	GPATCH1	97	83.825	Propithecus_coquereli
ENSSSCG00000002865	GPATCH1	86	88.798	ENSPVAG00000017767	GPATCH1	83	88.798	Pteropus_vampyrus
ENSSSCG00000002865	GPATCH1	84	54.499	ENSPNYG00000018189	gpatch1	92	54.455	Pundamilia_nyererei
ENSSSCG00000002865	GPATCH1	92	53.650	ENSPNAG00000013187	gpatch1	90	53.208	Pygocentrus_nattereri
ENSSSCG00000002865	GPATCH1	96	84.705	ENSRNOG00000011584	Gpatch1	91	85.159	Rattus_norvegicus
ENSSSCG00000002865	GPATCH1	96	79.538	ENSRBIG00000034723	GPATCH1	92	80.638	Rhinopithecus_bieti
ENSSSCG00000002865	GPATCH1	94	87.647	ENSRROG00000024428	GPATCH1	91	87.647	Rhinopithecus_roxellana
ENSSSCG00000002865	GPATCH1	94	87.176	ENSSBOG00000034650	GPATCH1	91	87.176	Saimiri_boliviensis_boliviensis
ENSSSCG00000002865	GPATCH1	94	75.736	ENSSHAG00000016016	GPATCH1	90	75.736	Sarcophilus_harrisii
ENSSSCG00000002865	GPATCH1	84	55.949	ENSSFOG00015011535	gpatch1	89	53.645	Scleropages_formosus
ENSSSCG00000002865	GPATCH1	84	49.327	ENSSMAG00000002883	gpatch1	93	48.052	Scophthalmus_maximus
ENSSSCG00000002865	GPATCH1	84	52.553	ENSSDUG00000007444	gpatch1	90	50.166	Seriola_dumerili
ENSSSCG00000002865	GPATCH1	84	53.240	ENSSLDG00000002856	gpatch1	94	51.643	Seriola_lalandi_dorsalis
ENSSSCG00000002865	GPATCH1	75	85.905	ENSSARG00000004108	GPATCH1	72	85.905	Sorex_araneus
ENSSSCG00000002865	GPATCH1	95	64.277	ENSTGUG00000009401	GPATCH1	91	64.379	Taeniopygia_guttata
ENSSSCG00000002865	GPATCH1	84	52.202	ENSTRUG00000005785	-	90	50.173	Takifugu_rubripes
ENSSSCG00000002865	GPATCH1	84	52.202	ENSTRUG00000025081	gpatch1	90	50.173	Takifugu_rubripes
ENSSSCG00000002865	GPATCH1	84	53.093	ENSTNIG00000002554	gpatch1	99	53.392	Tetraodon_nigroviridis
ENSSSCG00000002865	GPATCH1	66	76.998	ENSTBEG00000007750	-	83	76.998	Tupaia_belangeri
ENSSSCG00000002865	GPATCH1	94	84.525	ENSTTRG00000012221	GPATCH1	91	84.525	Tursiops_truncatus
ENSSSCG00000002865	GPATCH1	95	89.627	ENSUMAG00000014645	GPATCH1	96	90.447	Ursus_maritimus
ENSSSCG00000002865	GPATCH1	82	97.714	ENSVPAG00000010313	GPATCH1	86	97.826	Vicugna_pacos
ENSSSCG00000002865	GPATCH1	98	90.023	ENSVVUG00000016572	GPATCH1	95	90.023	Vulpes_vulpes
ENSSSCG00000002865	GPATCH1	95	52.632	ENSXETG00000018276	gpatch1	93	54.727	Xenopus_tropicalis