EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000002972 (Gene tree)
Gene ID: 100620899
Gene Symbol: -
Alias: -
Full Name: seryl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 10617 bases
Position: chr6:47717680-47728296
Accession: 100620899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000003215	tRNA-synt_2b	PF00587.25	6.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000003297	-	1566	XM_021094351	ENSSSCP00000003215	521 (aa)	XP_020950010	F1RI32

Gene Model

Click here to download ENSSSCG00000002972's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000002972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000002972	-	99	85.549	ENSG00000104835	SARS2	99	89.058	Homo_sapiens
ENSSSCG00000002972	-	64	30.058	ENSAPOG00000003503	sars	65	30.058	Acanthochromis_polyacanthus
ENSSSCG00000002972	-	90	60.169	ENSAPOG00000006562	sars2	90	60.169	Acanthochromis_polyacanthus
ENSSSCG00000002972	-	99	83.269	ENSAMEG00000008724	-	99	83.269	Ailuropoda_melanoleuca
ENSSSCG00000002972	-	90	59.915	ENSACIG00000002059	sars2	91	59.915	Amphilophus_citrinellus
ENSSSCG00000002972	-	90	60.127	ENSAOCG00000007157	sars2	90	60.127	Amphiprion_ocellaris
ENSSSCG00000002972	-	91	59.874	ENSAPEG00000024501	sars2	93	59.667	Amphiprion_percula
ENSSSCG00000002972	-	81	60.739	ENSATEG00000021919	sars2	98	60.739	Anabas_testudineus
ENSSSCG00000002972	-	96	60.588	ENSACAG00000028657	-	99	60.588	Anolis_carolinensis
ENSSSCG00000002972	-	99	86.948	ENSANAG00000034330	-	99	86.948	Aotus_nancymaae
ENSSSCG00000002972	-	64	30.145	ENSACLG00000009251	sars	65	30.145	Astatotilapia_calliptera
ENSSSCG00000002972	-	91	59.499	ENSACLG00000011683	sars2	90	59.499	Astatotilapia_calliptera
ENSSSCG00000002972	-	92	59.381	ENSAMXG00000041666	sars2	92	59.381	Astyanax_mexicanus
ENSSSCG00000002972	-	61	30.631	ENSBTAG00000012962	SARS	63	30.631	Bos_taurus
ENSSSCG00000002972	-	99	90.192	ENSBTAG00000001780	SARS2	99	90.192	Bos_taurus
ENSSSCG00000002972	-	61	39.564	WBGene00005662	sars-2	77	47.191	Caenorhabditis_elegans
ENSSSCG00000002972	-	99	86.346	ENSCJAG00000013994	-	99	86.346	Callithrix_jacchus
ENSSSCG00000002972	-	98	86.513	ENSCAFG00000005629	-	98	86.513	Canis_familiaris
ENSSSCG00000002972	-	98	88.499	ENSCAFG00020016808	-	98	88.499	Canis_lupus_dingo
ENSSSCG00000002972	-	99	88.654	ENSCHIG00000024636	-	99	88.654	Capra_hircus
ENSSSCG00000002972	-	61	30.816	ENSCHIG00000019575	SARS	63	30.816	Capra_hircus
ENSSSCG00000002972	-	99	75.577	ENSTSYG00000027694	-	99	84.314	Carlito_syrichta
ENSSSCG00000002972	-	50	30.147	ENSCAPG00000000321	SARS	58	30.147	Cavia_aperea
ENSSSCG00000002972	-	81	86.493	ENSCAPG00000006315	-	98	86.493	Cavia_aperea
ENSSSCG00000002972	-	98	84.736	ENSCPOG00000008471	-	98	84.736	Cavia_porcellus
ENSSSCG00000002972	-	98	87.084	ENSCCAG00000027866	-	99	87.084	Cebus_capucinus
ENSSSCG00000002972	-	99	85.549	ENSCATG00000035464	SARS2	99	85.549	Cercocebus_atys
ENSSSCG00000002972	-	53	30.272	ENSCATG00000042974	SARS	63	30.272	Cercocebus_atys
ENSSSCG00000002972	-	99	85.192	ENSCLAG00000016477	-	99	85.192	Chinchilla_lanigera
ENSSSCG00000002972	-	99	86.320	ENSCSAG00000003930	SARS2	99	86.320	Chlorocebus_sabaeus
ENSSSCG00000002972	-	75	85.057	ENSCHOG00000008439	-	83	85.057	Choloepus_hoffmanni
ENSSSCG00000002972	-	61	30.655	ENSCPBG00000010631	SARS	63	30.655	Chrysemys_picta_bellii
ENSSSCG00000002972	-	87	66.667	ENSCPBG00000018938	-	99	66.667	Chrysemys_picta_bellii
ENSSSCG00000002972	-	83	38.761	ENSCSAVG00000004919	-	97	38.761	Ciona_savignyi
ENSSSCG00000002972	-	62	31.737	ENSCSAVG00000008813	-	75	31.737	Ciona_savignyi
ENSSSCG00000002972	-	99	86.127	ENSCANG00000043828	SARS2	99	86.127	Colobus_angolensis_palliatus
ENSSSCG00000002972	-	99	83.269	ENSCGRG00001022604	Sars2	99	83.269	Cricetulus_griseus_chok1gshd
ENSSSCG00000002972	-	99	68.762	ENSCGRG00000006337	Sars2	99	68.762	Cricetulus_griseus_crigri
ENSSSCG00000002972	-	89	56.223	ENSCSEG00000014810	sars2	85	56.503	Cynoglossus_semilaevis
ENSSSCG00000002972	-	90	59.701	ENSCVAG00000006065	sars2	90	59.534	Cyprinodon_variegatus
ENSSSCG00000002972	-	74	30.025	ENSCVAG00000018550	sars	74	30.025	Cyprinodon_variegatus
ENSSSCG00000002972	-	90	59.275	ENSDARG00000102736	sars2	99	56.008	Danio_rerio
ENSSSCG00000002972	-	99	82.592	ENSDNOG00000003908	-	99	82.592	Dasypus_novemcinctus
ENSSSCG00000002972	-	61	30.030	ENSDNOG00000024033	-	63	30.030	Dasypus_novemcinctus
ENSSSCG00000002972	-	99	81.346	ENSDORG00000001542	Sars2	99	81.346	Dipodomys_ordii
ENSSSCG00000002972	-	64	39.820	FBgn0021750	SerRS-m	78	39.820	Drosophila_melanogaster
ENSSSCG00000002972	-	61	30.631	FBgn0031497	SerRS	64	30.631	Drosophila_melanogaster
ENSSSCG00000002972	-	74	58.656	ENSEBUG00000000292	sars2	99	59.401	Eptatretus_burgeri
ENSSSCG00000002972	-	98	87.354	ENSEASG00005019719	-	99	87.354	Equus_asinus_asinus
ENSSSCG00000002972	-	98	87.938	ENSECAG00000019654	-	99	87.938	Equus_caballus
ENSSSCG00000002972	-	90	59.534	ENSELUG00000019620	sars2	90	59.534	Esox_lucius
ENSSSCG00000002972	-	99	82.308	ENSFCAG00000003187	-	99	82.308	Felis_catus
ENSSSCG00000002972	-	98	82.261	ENSFDAG00000007894	-	98	82.261	Fukomys_damarensis
ENSSSCG00000002972	-	91	60.714	ENSFHEG00000017434	sars2	86	60.714	Fundulus_heteroclitus
ENSSSCG00000002972	-	90	59.831	ENSGMOG00000014424	sars2	93	59.831	Gadus_morhua
ENSSSCG00000002972	-	89	65.806	ENSGALG00000035641	-	96	63.984	Gallus_gallus
ENSSSCG00000002972	-	93	58.811	ENSGAFG00000013381	sars2	92	58.811	Gambusia_affinis
ENSSSCG00000002972	-	64	30.925	ENSGAFG00000000332	sars	65	30.925	Gambusia_affinis
ENSSSCG00000002972	-	90	58.351	ENSGACG00000005820	sars2	92	58.351	Gasterosteus_aculeatus
ENSSSCG00000002972	-	87	66.225	ENSGAGG00000009753	-	99	66.225	Gopherus_agassizii
ENSSSCG00000002972	-	61	30.030	ENSGAGG00000018557	SARS	63	30.030	Gopherus_agassizii
ENSSSCG00000002972	-	91	59.499	ENSHBUG00000023829	sars2	91	59.499	Haplochromis_burtoni
ENSSSCG00000002972	-	64	30.145	ENSHBUG00000005264	sars	65	30.145	Haplochromis_burtoni
ENSSSCG00000002972	-	100	82.342	ENSHGLG00000009655	-	100	82.342	Heterocephalus_glaber_female
ENSSSCG00000002972	-	100	82.342	ENSHGLG00100019308	-	100	82.342	Heterocephalus_glaber_male
ENSSSCG00000002972	-	92	57.613	ENSHCOG00000017362	sars2	95	57.669	Hippocampus_comes
ENSSSCG00000002972	-	94	58.300	ENSIPUG00000017755	sars2	90	58.300	Ictalurus_punctatus
ENSSSCG00000002972	-	99	67.946	ENSSTOG00000027120	-	99	67.946	Ictidomys_tridecemlineatus
ENSSSCG00000002972	-	99	83.172	ENSJJAG00000018250	Sars2	99	83.172	Jaculus_jaculus
ENSSSCG00000002972	-	92	58.420	ENSKMAG00000020640	sars2	92	58.385	Kryptolebias_marmoratus
ENSSSCG00000002972	-	91	59.368	ENSLBEG00000011593	sars2	83	59.368	Labrus_bergylta
ENSSSCG00000002972	-	91	54.167	ENSLACG00000018385	sars2	96	54.167	Latimeria_chalumnae
ENSSSCG00000002972	-	96	48.752	ENSLOCG00000014192	sars2	99	48.560	Lepisosteus_oculatus
ENSSSCG00000002972	-	99	85.742	ENSMFAG00000035652	SARS2	99	85.742	Macaca_fascicularis
ENSSSCG00000002972	-	99	85.934	ENSMMUG00000028765	SARS2	99	85.934	Macaca_mulatta
ENSSSCG00000002972	-	99	85.356	ENSMNEG00000031337	SARS2	99	85.356	Macaca_nemestrina
ENSSSCG00000002972	-	99	85.356	ENSMLEG00000043886	SARS2	99	85.356	Mandrillus_leucophaeus
ENSSSCG00000002972	-	90	59.701	ENSMAMG00000012860	sars2	91	59.579	Mastacembelus_armatus
ENSSSCG00000002972	-	64	30.145	ENSMZEG00005012167	sars	65	30.145	Maylandia_zebra
ENSSSCG00000002972	-	90	59.789	ENSMZEG00005005189	sars2	93	59.789	Maylandia_zebra
ENSSSCG00000002972	-	83	81.783	ENSMAUG00000006702	Sars2	94	81.783	Mesocricetus_auratus
ENSSSCG00000002972	-	99	87.500	ENSMICG00000033729	-	99	87.500	Microcebus_murinus
ENSSSCG00000002972	-	86	76.866	ENSMOCG00000002784	Sars2	99	76.866	Microtus_ochrogaster
ENSSSCG00000002972	-	62	30.000	ENSMMOG00000020205	sars	64	30.000	Mola_mola
ENSSSCG00000002972	-	93	58.333	ENSMMOG00000007091	sars2	94	58.333	Mola_mola
ENSSSCG00000002972	-	90	59.110	ENSMALG00000020168	sars2	90	59.110	Monopterus_albus
ENSSSCG00000002972	-	99	83.654	MGP_CAROLIEiJ_G0029458	Sars2	99	83.654	Mus_caroli
ENSSSCG00000002972	-	99	84.038	ENSMUSG00000070699	Sars2	99	84.038	Mus_musculus
ENSSSCG00000002972	-	99	83.077	MGP_PahariEiJ_G0012692	Sars2	99	83.077	Mus_pahari
ENSSSCG00000002972	-	99	83.654	MGP_SPRETEiJ_G0030554	Sars2	99	83.654	Mus_spretus
ENSSSCG00000002972	-	98	88.109	ENSMPUG00000017751	-	98	88.109	Mustela_putorius_furo
ENSSSCG00000002972	-	99	89.403	ENSMLUG00000000998	-	99	89.403	Myotis_lucifugus
ENSSSCG00000002972	-	100	81.992	ENSNGAG00000007723	Sars2	100	81.992	Nannospalax_galili
ENSSSCG00000002972	-	90	59.062	ENSNBRG00000001755	sars2	92	58.947	Neolamprologus_brichardi
ENSSSCG00000002972	-	99	84.971	ENSNLEG00000014561	SARS2	99	84.971	Nomascus_leucogenys
ENSSSCG00000002972	-	91	72.034	ENSMEUG00000012092	-	97	72.034	Notamacropus_eugenii
ENSSSCG00000002972	-	99	81.382	ENSODEG00000016702	-	100	81.382	Octodon_degus
ENSSSCG00000002972	-	91	59.167	ENSONIG00000016635	sars2	99	59.167	Oreochromis_niloticus
ENSSSCG00000002972	-	64	30.145	ENSONIG00000009102	sars	65	30.145	Oreochromis_niloticus
ENSSSCG00000002972	-	99	85.577	ENSOCUG00000000687	-	99	85.577	Oryctolagus_cuniculus
ENSSSCG00000002972	-	91	59.916	ENSORLG00000008723	sars2	98	61.871	Oryzias_latipes
ENSSSCG00000002972	-	91	60.127	ENSORLG00020019810	sars2	90	60.127	Oryzias_latipes_hni
ENSSSCG00000002972	-	91	60.338	ENSORLG00015001254	sars2	98	62.530	Oryzias_latipes_hsok
ENSSSCG00000002972	-	91	59.705	ENSOMEG00000018375	sars2	90	59.705	Oryzias_melastigma
ENSSSCG00000002972	-	100	84.674	ENSOGAG00000008291	-	100	84.674	Otolemur_garnettii
ENSSSCG00000002972	-	99	81.905	ENSOARG00000005918	-	99	81.905	Ovis_aries
ENSSSCG00000002972	-	61	30.816	ENSOARG00000019108	SARS	63	30.816	Ovis_aries
ENSSSCG00000002972	-	99	85.934	ENSPPAG00000036933	-	99	85.934	Pan_paniscus
ENSSSCG00000002972	-	99	88.846	ENSPPRG00000019182	-	99	88.846	Panthera_pardus
ENSSSCG00000002972	-	99	77.203	ENSPTIG00000007979	-	91	87.425	Panthera_tigris_altaica
ENSSSCG00000002972	-	99	85.742	ENSPTRG00000010947	-	99	85.742	Pan_troglodytes
ENSSSCG00000002972	-	99	85.164	ENSPANG00000009514	SARS2	99	85.164	Papio_anubis
ENSSSCG00000002972	-	91	58.281	ENSPKIG00000000234	sars2	91	58.281	Paramormyrops_kingsleyae
ENSSSCG00000002972	-	61	30.631	ENSPSIG00000010500	SARS	63	30.631	Pelodiscus_sinensis
ENSSSCG00000002972	-	81	63.895	ENSPSIG00000012929	-	100	63.895	Pelodiscus_sinensis
ENSSSCG00000002972	-	90	61.311	ENSPMGG00000009119	sars2	89	61.311	Periophthalmus_magnuspinnatus
ENSSSCG00000002972	-	99	83.846	ENSPEMG00000012004	Sars2	99	83.846	Peromyscus_maniculatus_bairdii
ENSSSCG00000002972	-	90	58.898	ENSPMAG00000002160	sars2	93	57.460	Petromyzon_marinus
ENSSSCG00000002972	-	62	31.304	ENSPMAG00000006797	sars	73	31.304	Petromyzon_marinus
ENSSSCG00000002972	-	92	74.895	ENSPCIG00000010533	-	92	74.895	Phascolarctos_cinereus
ENSSSCG00000002972	-	64	30.636	ENSPFOG00000005074	sars	68	30.636	Poecilia_formosa
ENSSSCG00000002972	-	90	59.322	ENSPFOG00000002338	sars2	98	59.322	Poecilia_formosa
ENSSSCG00000002972	-	90	59.322	ENSPLAG00000006817	sars2	95	60.757	Poecilia_latipinna
ENSSSCG00000002972	-	64	30.347	ENSPLAG00000003701	sars	68	30.347	Poecilia_latipinna
ENSSSCG00000002972	-	90	59.322	ENSPMEG00000009775	sars2	97	60.870	Poecilia_mexicana
ENSSSCG00000002972	-	90	59.534	ENSPREG00000008164	sars2	87	59.534	Poecilia_reticulata
ENSSSCG00000002972	-	99	84.971	ENSPPYG00000009949	SARS2	99	84.971	Pongo_abelii
ENSSSCG00000002972	-	99	75.385	ENSPCAG00000010740	-	99	75.385	Procavia_capensis
ENSSSCG00000002972	-	84	87.541	ENSPVAG00000011604	-	84	87.541	Pteropus_vampyrus
ENSSSCG00000002972	-	90	59.701	ENSPNYG00000001941	sars2	93	59.579	Pundamilia_nyererei
ENSSSCG00000002972	-	64	30.145	ENSPNYG00000005062	sars	65	30.145	Pundamilia_nyererei
ENSSSCG00000002972	-	90	59.746	ENSPNAG00000024745	sars2	91	59.746	Pygocentrus_nattereri
ENSSSCG00000002972	-	99	84.423	ENSRNOG00000019962	Sars2	99	84.423	Rattus_norvegicus
ENSSSCG00000002972	-	99	85.742	ENSRBIG00000033833	SARS2	99	85.742	Rhinopithecus_bieti
ENSSSCG00000002972	-	99	85.934	ENSRROG00000032166	SARS2	99	85.934	Rhinopithecus_roxellana
ENSSSCG00000002972	-	77	30.467	YHR011W	-	87	30.467	Saccharomyces_cerevisiae
ENSSSCG00000002972	-	99	85.769	ENSSBOG00000024002	-	99	85.769	Saimiri_boliviensis_boliviensis
ENSSSCG00000002972	-	90	59.488	ENSSFOG00015007160	sars2	90	59.488	Scleropages_formosus
ENSSSCG00000002972	-	80	59.620	ENSSMAG00000000240	sars2	99	59.620	Scophthalmus_maximus
ENSSSCG00000002972	-	90	60.341	ENSSDUG00000010702	sars2	90	60.169	Seriola_dumerili
ENSSSCG00000002972	-	91	59.539	ENSSLDG00000000426	sars2	96	59.375	Seriola_lalandi_dorsalis
ENSSSCG00000002972	-	62	30.060	ENSSPUG00000011201	SARS	69	30.060	Sphenodon_punctatus
ENSSSCG00000002972	-	79	50.725	ENSSPUG00000002348	-	87	50.600	Sphenodon_punctatus
ENSSSCG00000002972	-	92	56.341	ENSSPAG00000000519	sars2	92	56.341	Stegastes_partitus
ENSSSCG00000002972	-	90	59.322	ENSTRUG00000004509	sars2	90	59.322	Takifugu_rubripes
ENSSSCG00000002972	-	94	57.317	ENSTNIG00000014335	sars2	93	57.613	Tetraodon_nigroviridis
ENSSSCG00000002972	-	99	83.654	ENSTTRG00000011792	-	99	83.654	Tursiops_truncatus
ENSSSCG00000002972	-	99	89.231	ENSUAMG00000011023	-	99	89.231	Ursus_americanus
ENSSSCG00000002972	-	99	88.077	ENSUMAG00000019233	-	99	88.077	Ursus_maritimus
ENSSSCG00000002972	-	99	88.588	ENSVVUG00000006437	-	99	88.588	Vulpes_vulpes
ENSSSCG00000002972	-	80	63.895	ENSXETG00000005332	sars2	70	63.895	Xenopus_tropicalis
ENSSSCG00000002972	-	79	62.287	ENSXCOG00000002528	sars2	97	62.077	Xiphophorus_couchianus
ENSSSCG00000002972	-	74	30.025	ENSXMAG00000016138	sars	73	30.025	Xiphophorus_maculatus
ENSSSCG00000002972	-	93	59.381	ENSXMAG00000002613	sars2	98	61.871	Xiphophorus_maculatus