EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000003070 (Gene tree)
Gene ID: 100524260
Gene Symbol: ZNF45
Alias: ZNF13
Full Name: zinc finger protein 45
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 26322 bases
Position: chr6:50733138-50759459
Accession: 100524260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	1	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	2	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	3	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	4	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	5	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	6	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	7	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	8	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	9	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	10	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	11	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	12	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	13	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	14	15
ENSSSCP00000003324	zf-C2H2	PF00096.26	6.6e-83	15	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	1	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	2	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	3	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	4	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	5	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	6	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	7	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	8	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	9	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	10	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	11	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	12	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	13	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	14	15
ENSSSCP00000043627	zf-C2H2	PF00096.26	6.6e-83	15	15
ENSSSCP00000003324	zf-met	PF12874.7	1.7e-07	1	1
ENSSSCP00000043627	zf-met	PF12874.7	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000003407	ZNF45-202	2461	XM_021094491	ENSSSCP00000003324	687 (aa)	XP_020950150	F1RMV0
ENSSSCT00000060898	ZNF45-201	3844	XM_021094489	ENSSSCP00000043627	687 (aa)	XP_020950148	F1RMV0

Gene Model

Click here to download ENSSSCG00000003070's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000003070's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000003070	ZNF45	97	52.162	ENSSSCG00000035876	ZNF599	98	53.750
ENSSSCG00000003070	ZNF45	97	49.373	ENSSSCG00000022634	-	94	49.373
ENSSSCG00000003070	ZNF45	78	52.195	ENSSSCG00000025343	ZNF628	59	40.134
ENSSSCG00000003070	ZNF45	99	48.983	ENSSSCG00000038009	-	99	48.983
ENSSSCG00000003070	ZNF45	76	55.755	ENSSSCG00000023349	ZNF768	51	55.714
ENSSSCG00000003070	ZNF45	93	49.533	ENSSSCG00000036608	-	99	49.533
ENSSSCG00000003070	ZNF45	97	59.565	ENSSSCG00000040389	-	99	59.565
ENSSSCG00000003070	ZNF45	97	40.278	ENSSSCG00000012283	ZNF81	96	40.413
ENSSSCG00000003070	ZNF45	99	54.758	ENSSSCG00000003077	ZNF112	99	59.016
ENSSSCG00000003070	ZNF45	97	49.875	ENSSSCG00000027351	ZNF454	99	49.875
ENSSSCG00000003070	ZNF45	77	53.974	ENSSSCG00000029696	-	91	53.974
ENSSSCG00000003070	ZNF45	97	43.350	ENSSSCG00000029347	-	97	45.567
ENSSSCG00000003070	ZNF45	98	52.941	ENSSSCG00000027741	-	97	52.941
ENSSSCG00000003070	ZNF45	96	55.593	ENSSSCG00000003322	-	91	55.593
ENSSSCG00000003070	ZNF45	81	58.303	ENSSSCG00000003076	ZNF226	90	58.303
ENSSSCG00000003070	ZNF45	97	57.869	ENSSSCG00000022434	ZNF235	99	57.869
ENSSSCG00000003070	ZNF45	97	54.417	ENSSSCG00000039774	-	99	54.417
ENSSSCG00000003070	ZNF45	97	45.794	ENSSSCG00000032506	ZNF317	90	45.794
ENSSSCG00000003070	ZNF45	97	47.843	ENSSSCG00000031774	-	98	47.843

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000003070	ZNF45	88	77.159	ENSCGRG00001012640	Zfp94	97	77.159	Cricetulus_griseus_chok1gshd
ENSSSCG00000003070	ZNF45	88	76.880	ENSCGRG00000017528	Zfp94	97	76.880	Cricetulus_griseus_crigri
ENSSSCG00000003070	ZNF45	100	75.000	MGP_CAROLIEiJ_G0029329	Zfp94	100	75.000	Mus_caroli
ENSSSCG00000003070	ZNF45	100	76.164	ENSMUSG00000074282	Zfp94	100	76.164	Mus_musculus
ENSSSCG00000003070	ZNF45	99	75.623	MGP_PahariEiJ_G0021180	Zfp94	94	75.623	Mus_pahari
ENSSSCG00000003070	ZNF45	100	76.164	MGP_SPRETEiJ_G0030423	Zfp94	100	76.164	Mus_spretus
ENSSSCG00000003070	ZNF45	100	75.224	ENSNGAG00000019166	Zfp94	100	70.027	Nannospalax_galili
ENSSSCG00000003070	ZNF45	98	73.958	ENSOPRG00000009545	ZNF45	99	73.958	Ochotona_princeps
ENSSSCG00000003070	ZNF45	99	84.480	ENSPANG00000019290	ZNF45	99	84.480	Papio_anubis
ENSSSCG00000003070	ZNF45	99	73.842	ENSPEMG00000000860	Zfp94	99	73.842	Peromyscus_maniculatus_bairdii