EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000003093 (Gene tree)
Gene ID: 100512609
Gene Symbol: SYMPK
Alias: SPK|SYM
Full Name: symplekin
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 40754 bases
Position: chr6:52139540-52180293
Accession: 100512609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000003349	Symplekin_C	PF12295.8	5.6e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000003432	SYMPK-201	3929	XM_005664608	ENSSSCP00000003349	1271 (aa)	XP_005664665	F1RM40

Gene Model

Click here to download ENSSSCG00000003093's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03015	mRNA surveillance pathway	KEGG
ssc04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000003093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000003093	SYMPK	100	97.174	ENSG00000125755	SYMPK	100	98.592	Homo_sapiens
ENSSSCG00000003093	SYMPK	86	73.975	ENSAPOG00000015934	sympk	97	73.870	Acanthochromis_polyacanthus
ENSSSCG00000003093	SYMPK	100	98.190	ENSAMEG00000000680	SYMPK	100	98.190	Ailuropoda_melanoleuca
ENSSSCG00000003093	SYMPK	85	74.725	ENSACIG00000006357	sympk	92	74.725	Amphilophus_citrinellus
ENSSSCG00000003093	SYMPK	85	74.908	ENSAOCG00000024124	sympk	92	74.632	Amphiprion_ocellaris
ENSSSCG00000003093	SYMPK	85	74.908	ENSAPEG00000003465	sympk	90	74.255	Amphiprion_percula
ENSSSCG00000003093	SYMPK	87	74.153	ENSATEG00000008472	sympk	90	74.796	Anabas_testudineus
ENSSSCG00000003093	SYMPK	90	78.921	ENSACAG00000004126	SYMPK	99	78.739	Anolis_carolinensis
ENSSSCG00000003093	SYMPK	100	97.484	ENSANAG00000021087	SYMPK	99	98.962	Aotus_nancymaae
ENSSSCG00000003093	SYMPK	88	74.002	ENSACLG00000001813	sympk	91	74.573	Astatotilapia_calliptera
ENSSSCG00000003093	SYMPK	89	72.893	ENSAMXG00000013677	sympk	91	74.309	Astyanax_mexicanus
ENSSSCG00000003093	SYMPK	100	98.035	ENSBTAG00000012101	SYMPK	100	98.035	Bos_taurus
ENSSSCG00000003093	SYMPK	100	94.571	ENSCJAG00000012172	SYMPK	99	96.990	Callithrix_jacchus
ENSSSCG00000003093	SYMPK	100	98.119	ENSCAFG00000004376	SYMPK	100	98.119	Canis_familiaris
ENSSSCG00000003093	SYMPK	100	98.119	ENSCAFG00020001815	SYMPK	100	98.119	Canis_lupus_dingo
ENSSSCG00000003093	SYMPK	100	98.035	ENSCHIG00000026784	SYMPK	100	98.035	Capra_hircus
ENSSSCG00000003093	SYMPK	100	96.638	ENSTSYG00000006268	SYMPK	99	96.638	Carlito_syrichta
ENSSSCG00000003093	SYMPK	84	95.216	ENSCAPG00000005112	SYMPK	96	95.216	Cavia_aperea
ENSSSCG00000003093	SYMPK	100	91.915	ENSCPOG00000010434	SYMPK	100	91.915	Cavia_porcellus
ENSSSCG00000003093	SYMPK	100	97.563	ENSCCAG00000036309	SYMPK	99	99.065	Cebus_capucinus
ENSSSCG00000003093	SYMPK	100	97.410	ENSCATG00000045107	SYMPK	99	98.783	Cercocebus_atys
ENSSSCG00000003093	SYMPK	100	96.069	ENSCLAG00000001206	SYMPK	100	96.069	Chinchilla_lanigera
ENSSSCG00000003093	SYMPK	100	97.410	ENSCSAG00000003115	SYMPK	100	97.410	Chlorocebus_sabaeus
ENSSSCG00000003093	SYMPK	69	100.000	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
ENSSSCG00000003093	SYMPK	99	82.284	ENSCPBG00000007170	SYMPK	98	84.109	Chrysemys_picta_bellii
ENSSSCG00000003093	SYMPK	83	49.160	ENSCING00000021232	-	96	49.200	Ciona_intestinalis
ENSSSCG00000003093	SYMPK	82	47.887	ENSCSAVG00000005154	-	100	48.169	Ciona_savignyi
ENSSSCG00000003093	SYMPK	100	94.778	ENSCANG00000040907	SYMPK	100	94.934	Colobus_angolensis_palliatus
ENSSSCG00000003093	SYMPK	92	91.436	ENSCGRG00001010086	Sympk	100	91.436	Cricetulus_griseus_chok1gshd
ENSSSCG00000003093	SYMPK	87	73.971	ENSCSEG00000016802	sympk	91	73.991	Cynoglossus_semilaevis
ENSSSCG00000003093	SYMPK	89	71.701	ENSDARG00000059553	sympk	89	73.250	Danio_rerio
ENSSSCG00000003093	SYMPK	99	95.810	ENSDNOG00000016149	SYMPK	98	95.810	Dasypus_novemcinctus
ENSSSCG00000003093	SYMPK	86	36.809	FBgn0037371	Sym	95	36.809	Drosophila_melanogaster
ENSSSCG00000003093	SYMPK	50	95.860	ENSETEG00000015995	-	54	95.860	Echinops_telfairi
ENSSSCG00000003093	SYMPK	70	60.132	ENSEBUG00000000387	sympk	89	61.982	Eptatretus_burgeri
ENSSSCG00000003093	SYMPK	100	98.272	ENSEASG00005014227	SYMPK	100	98.272	Equus_asinus_asinus
ENSSSCG00000003093	SYMPK	100	98.272	ENSECAG00000008163	SYMPK	100	98.272	Equus_caballus
ENSSSCG00000003093	SYMPK	69	96.000	ENSEEUG00000000270	-	81	96.000	Erinaceus_europaeus
ENSSSCG00000003093	SYMPK	87	75.247	ENSELUG00000000850	sympk	88	75.358	Esox_lucius
ENSSSCG00000003093	SYMPK	100	98.429	ENSFCAG00000007337	SYMPK	100	98.429	Felis_catus
ENSSSCG00000003093	SYMPK	100	96.151	ENSFDAG00000011272	SYMPK	100	96.151	Fukomys_damarensis
ENSSSCG00000003093	SYMPK	86	75.479	ENSFHEG00000010274	sympk	90	75.204	Fundulus_heteroclitus
ENSSSCG00000003093	SYMPK	85	73.333	ENSGMOG00000002357	sympk	99	73.333	Gadus_morhua
ENSSSCG00000003093	SYMPK	87	75.248	ENSGAFG00000010976	sympk	90	75.159	Gambusia_affinis
ENSSSCG00000003093	SYMPK	88	72.840	ENSGACG00000002735	sympk	98	74.679	Gasterosteus_aculeatus
ENSSSCG00000003093	SYMPK	67	77.700	ENSGAGG00000012538	-	88	85.038	Gopherus_agassizii
ENSSSCG00000003093	SYMPK	100	97.331	ENSGGOG00000003410	SYMPK	98	97.331	Gorilla_gorilla
ENSSSCG00000003093	SYMPK	88	74.091	ENSHBUG00000023564	sympk	91	74.663	Haplochromis_burtoni
ENSSSCG00000003093	SYMPK	100	91.359	ENSHGLG00000005228	SYMPK	100	91.359	Heterocephalus_glaber_female
ENSSSCG00000003093	SYMPK	100	91.223	ENSHGLG00100018571	SYMPK	100	90.980	Heterocephalus_glaber_male
ENSSSCG00000003093	SYMPK	85	70.577	ENSHCOG00000017400	sympk	91	70.577	Hippocampus_comes
ENSSSCG00000003093	SYMPK	87	74.167	ENSIPUG00000024020	SYMPK	90	74.104	Ictalurus_punctatus
ENSSSCG00000003093	SYMPK	100	97.170	ENSSTOG00000001534	SYMPK	100	97.170	Ictidomys_tridecemlineatus
ENSSSCG00000003093	SYMPK	100	94.988	ENSJJAG00000006633	Sympk	100	95.145	Jaculus_jaculus
ENSSSCG00000003093	SYMPK	86	74.863	ENSKMAG00000016292	sympk	90	74.932	Kryptolebias_marmoratus
ENSSSCG00000003093	SYMPK	86	74.841	ENSLBEG00000027913	sympk	96	71.099	Labrus_bergylta
ENSSSCG00000003093	SYMPK	95	71.476	ENSLACG00000016497	SYMPK	99	71.700	Latimeria_chalumnae
ENSSSCG00000003093	SYMPK	100	96.863	ENSLAFG00000008726	SYMPK	100	96.863	Loxodonta_africana
ENSSSCG00000003093	SYMPK	100	97.410	ENSMMUG00000015428	SYMPK	100	97.410	Macaca_mulatta
ENSSSCG00000003093	SYMPK	100	97.331	ENSMNEG00000019439	SYMPK	99	98.689	Macaca_nemestrina
ENSSSCG00000003093	SYMPK	100	97.331	ENSMLEG00000040508	SYMPK	99	98.783	Mandrillus_leucophaeus
ENSSSCG00000003093	SYMPK	87	74.188	ENSMAMG00000010486	sympk	89	74.840	Mastacembelus_armatus
ENSSSCG00000003093	SYMPK	88	74.002	ENSMZEG00005014146	sympk	91	74.573	Maylandia_zebra
ENSSSCG00000003093	SYMPK	100	92.260	ENSMAUG00000015657	Sympk	100	92.091	Mesocricetus_auratus
ENSSSCG00000003093	SYMPK	100	97.333	ENSMICG00000001871	SYMPK	100	97.333	Microcebus_murinus
ENSSSCG00000003093	SYMPK	100	93.765	ENSMOCG00000008388	Sympk	100	93.765	Microtus_ochrogaster
ENSSSCG00000003093	SYMPK	87	72.262	ENSMMOG00000019227	sympk	94	72.801	Mola_mola
ENSSSCG00000003093	SYMPK	97	89.358	ENSMODG00000021534	SYMPK	96	88.613	Monodelphis_domestica
ENSSSCG00000003093	SYMPK	73	69.681	ENSMALG00000008347	sympk	96	70.000	Monopterus_albus
ENSSSCG00000003093	SYMPK	100	93.843	MGP_CAROLIEiJ_G0029267	Sympk	100	93.843	Mus_caroli
ENSSSCG00000003093	SYMPK	100	93.029	ENSMUSG00000023118	Sympk	100	93.029	Mus_musculus
ENSSSCG00000003093	SYMPK	100	94.214	MGP_PahariEiJ_G0021127	Sympk	100	94.058	Mus_pahari
ENSSSCG00000003093	SYMPK	100	93.604	MGP_SPRETEiJ_G0030351	-	100	93.604	Mus_spretus
ENSSSCG00000003093	SYMPK	100	96.157	ENSMPUG00000005505	SYMPK	100	96.157	Mustela_putorius_furo
ENSSSCG00000003093	SYMPK	79	93.227	ENSMLUG00000001359	SYMPK	100	93.227	Myotis_lucifugus
ENSSSCG00000003093	SYMPK	100	95.380	ENSNGAG00000000820	Sympk	100	95.301	Nannospalax_galili
ENSSSCG00000003093	SYMPK	86	73.466	ENSNBRG00000018101	sympk	92	75.257	Neolamprologus_brichardi
ENSSSCG00000003093	SYMPK	100	83.881	ENSNLEG00000002369	SYMPK	100	84.194	Nomascus_leucogenys
ENSSSCG00000003093	SYMPK	79	89.474	ENSMEUG00000003866	SYMPK	82	89.474	Notamacropus_eugenii
ENSSSCG00000003093	SYMPK	100	93.505	ENSOPRG00000009967	SYMPK	100	93.662	Ochotona_princeps
ENSSSCG00000003093	SYMPK	100	96.072	ENSODEG00000007519	SYMPK	100	96.072	Octodon_degus
ENSSSCG00000003093	SYMPK	87	73.820	ENSONIG00000016802	sympk	96	74.391	Oreochromis_niloticus
ENSSSCG00000003093	SYMPK	76	97.513	ENSOCUG00000005511	SYMPK	90	97.513	Oryctolagus_cuniculus
ENSSSCG00000003093	SYMPK	86	74.796	ENSORLG00000015338	sympk	96	74.023	Oryzias_latipes
ENSSSCG00000003093	SYMPK	86	74.705	ENSORLG00020004402	sympk	91	74.705	Oryzias_latipes_hni
ENSSSCG00000003093	SYMPK	86	74.796	ENSORLG00015005712	sympk	90	75.460	Oryzias_latipes_hsok
ENSSSCG00000003093	SYMPK	85	74.977	ENSOMEG00000022561	sympk	90	74.977	Oryzias_melastigma
ENSSSCG00000003093	SYMPK	100	97.331	ENSOGAG00000013483	SYMPK	100	97.331	Otolemur_garnettii
ENSSSCG00000003093	SYMPK	100	92.344	ENSOARG00000010349	SYMPK	100	92.344	Ovis_aries
ENSSSCG00000003093	SYMPK	100	97.253	ENSPPAG00000043204	SYMPK	100	97.253	Pan_paniscus
ENSSSCG00000003093	SYMPK	100	98.350	ENSPPRG00000004282	SYMPK	100	98.350	Panthera_pardus
ENSSSCG00000003093	SYMPK	100	95.991	ENSPTIG00000015420	SYMPK	100	95.991	Panthera_tigris_altaica
ENSSSCG00000003093	SYMPK	100	97.253	ENSPTRG00000011169	SYMPK	100	97.253	Pan_troglodytes
ENSSSCG00000003093	SYMPK	100	97.410	ENSPANG00000019930	SYMPK	99	98.783	Papio_anubis
ENSSSCG00000003093	SYMPK	87	76.318	ENSPKIG00000017132	sympk	96	72.987	Paramormyrops_kingsleyae
ENSSSCG00000003093	SYMPK	100	94.072	ENSPEMG00000007564	Sympk	100	93.994	Peromyscus_maniculatus_bairdii
ENSSSCG00000003093	SYMPK	81	65.679	ENSPMAG00000004936	sympk	100	65.774	Petromyzon_marinus
ENSSSCG00000003093	SYMPK	98	88.608	ENSPCIG00000024476	SYMPK	99	87.442	Phascolarctos_cinereus
ENSSSCG00000003093	SYMPK	86	75.362	ENSPFOG00000001194	sympk	90	75.614	Poecilia_formosa
ENSSSCG00000003093	SYMPK	86	75.272	ENSPLAG00000012995	sympk	90	75.523	Poecilia_latipinna
ENSSSCG00000003093	SYMPK	86	75.272	ENSPMEG00000008099	sympk	90	75.523	Poecilia_mexicana
ENSSSCG00000003093	SYMPK	87	75.293	ENSPREG00000006176	sympk	90	75.521	Poecilia_reticulata
ENSSSCG00000003093	SYMPK	87	98.112	ENSPPYG00000010135	SYMPK	99	98.112	Pongo_abelii
ENSSSCG00000003093	SYMPK	94	91.424	ENSPCAG00000005182	SYMPK	94	91.424	Procavia_capensis
ENSSSCG00000003093	SYMPK	100	97.882	ENSPCOG00000023740	SYMPK	100	97.882	Propithecus_coquereli
ENSSSCG00000003093	SYMPK	97	96.999	ENSPVAG00000001355	SYMPK	99	96.999	Pteropus_vampyrus
ENSSSCG00000003093	SYMPK	88	74.002	ENSPNYG00000011455	sympk	90	74.573	Pundamilia_nyererei
ENSSSCG00000003093	SYMPK	89	73.652	ENSPNAG00000016505	sympk	89	75.022	Pygocentrus_nattereri
ENSSSCG00000003093	SYMPK	100	93.843	ENSRNOG00000014353	Sympk	100	93.687	Rattus_norvegicus
ENSSSCG00000003093	SYMPK	100	97.176	ENSRBIG00000040963	SYMPK	99	98.770	Rhinopithecus_bieti
ENSSSCG00000003093	SYMPK	100	97.410	ENSRROG00000024834	SYMPK	100	97.410	Rhinopithecus_roxellana
ENSSSCG00000003093	SYMPK	100	97.563	ENSSBOG00000034497	SYMPK	100	97.563	Saimiri_boliviensis_boliviensis
ENSSSCG00000003093	SYMPK	90	91.067	ENSSHAG00000003139	SYMPK	99	90.980	Sarcophilus_harrisii
ENSSSCG00000003093	SYMPK	87	76.182	ENSSFOG00015006974	sympk	90	76.182	Scleropages_formosus
ENSSSCG00000003093	SYMPK	86	74.161	ENSSMAG00000018130	sympk	72	74.226	Scophthalmus_maximus
ENSSSCG00000003093	SYMPK	87	74.170	ENSSDUG00000007092	sympk	90	74.324	Seriola_dumerili
ENSSSCG00000003093	SYMPK	87	74.170	ENSSLDG00000014774	sympk	96	71.757	Seriola_lalandi_dorsalis
ENSSSCG00000003093	SYMPK	61	98.462	ENSSARG00000004274	-	66	98.462	Sorex_araneus
ENSSSCG00000003093	SYMPK	96	83.549	ENSSPUG00000002789	SYMPK	96	81.697	Sphenodon_punctatus
ENSSSCG00000003093	SYMPK	85	75.414	ENSSPAG00000000854	sympk	90	74.684	Stegastes_partitus
ENSSSCG00000003093	SYMPK	87	74.194	ENSTRUG00000010202	sympk	91	74.480	Takifugu_rubripes
ENSSSCG00000003093	SYMPK	85	74.495	ENSTNIG00000017855	sympk	98	73.694	Tetraodon_nigroviridis
ENSSSCG00000003093	SYMPK	88	94.156	ENSTBEG00000000454	SYMPK	88	94.156	Tupaia_belangeri
ENSSSCG00000003093	SYMPK	100	90.353	ENSTTRG00000014311	SYMPK	100	90.353	Tursiops_truncatus
ENSSSCG00000003093	SYMPK	100	95.991	ENSUAMG00000022272	SYMPK	100	95.918	Ursus_americanus
ENSSSCG00000003093	SYMPK	100	98.192	ENSUMAG00000023698	SYMPK	100	98.192	Ursus_maritimus
ENSSSCG00000003093	SYMPK	89	97.979	ENSVVUG00000003024	SYMPK	99	97.979	Vulpes_vulpes
ENSSSCG00000003093	SYMPK	90	72.743	ENSXETG00000024453	sympk	94	72.830	Xenopus_tropicalis
ENSSSCG00000003093	SYMPK	84	74.561	ENSXCOG00000015368	sympk	100	74.561	Xiphophorus_couchianus
ENSSSCG00000003093	SYMPK	86	75.362	ENSXMAG00000005737	sympk	90	75.340	Xiphophorus_maculatus