EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSSCG00000003264 (Gene tree)
Gene ID
100520963
Gene Symbol
CNOT3
Alias
KIAA0691|LENG2|NOT3|NOT3H
Full Name
CCR4-NOT transcription complex subunit 3
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Minus strand
Length
17453 bases
Position
chr6:55973869-55991321
Accession
100520963
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000040632Not3PF04065.155.6e-9511
ENSSSCP00000003540Not3PF04065.157.1e-9511
ENSSSCP00000042067Not3PF04065.157.6e-9511
ENSSSCP00000042067NOT2_3_5PF04153.188.7e-4111
ENSSSCP00000003540NOT2_3_5PF04153.182.2e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000041346CNOT3-2013557XM_005664822ENSSSCP00000042067754 (aa)XP_005664879A0A287AE28
ENSSSCT00000066205CNOT3-2022288-ENSSSCP00000040632636 (aa)-A0A287AA09
ENSSSCT00000003625CNOT3-2032943-ENSSSCP00000003540719 (aa)-F1RNH3
Gene Model
Click here to download ENSSSCG00000003264's gene model file
Pathways
Pathway IDPathway NameSource
ssc03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000003264's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000003264CNOT310097.745ENSG00000088038CNOT3100100.000Homo_sapiens
ENSSSCG00000003264CNOT36981.720ENSAPOG00000015499CNOT39581.720Acanthochromis_polyacanthus
ENSSSCG00000003264CNOT310096.817ENSAMEG00000004528CNOT310096.817Ailuropoda_melanoleuca
ENSSSCG00000003264CNOT35889.732ENSACIG00000003652cnot3b7688.987Amphilophus_citrinellus
ENSSSCG00000003264CNOT37589.145ENSACIG00000006635cnot3a10084.791Amphilophus_citrinellus
ENSSSCG00000003264CNOT36687.671ENSAOCG00000018385-7879.026Amphiprion_ocellaris
ENSSSCG00000003264CNOT38390.132ENSAOCG00000023769cnot3a6789.836Amphiprion_ocellaris
ENSSSCG00000003264CNOT38490.132ENSAPEG00000006624cnot3a6889.836Amphiprion_percula
ENSSSCG00000003264CNOT39757.922ENSAPEG00000002640cnot3b7590.741Amphiprion_percula
ENSSSCG00000003264CNOT37291.803ENSATEG00000015777cnot3b6692.105Anabas_testudineus
ENSSSCG00000003264CNOT38490.789ENSATEG00000022737cnot3a6790.492Anabas_testudineus
ENSSSCG00000003264CNOT310081.159ENSACAG00000016085CNOT310080.530Anolis_carolinensis
ENSSSCG00000003264CNOT310096.821ENSANAG00000025756CNOT310096.821Aotus_nancymaae
ENSSSCG00000003264CNOT38492.459ENSACLG00000016702cnot3b6792.763Astatotilapia_calliptera
ENSSSCG00000003264CNOT38490.132ENSACLG00000021136cnot3a6889.836Astatotilapia_calliptera
ENSSSCG00000003264CNOT38491.148ENSAMXG00000009447cnot3b7088.770Astyanax_mexicanus
ENSSSCG00000003264CNOT37589.180ENSAMXG00000012359cnot3a6888.065Astyanax_mexicanus
ENSSSCG00000003264CNOT310094.430ENSBTAG00000014900CNOT310094.430Bos_taurus
ENSSSCG00000003264CNOT36052.332WBGene00003826ntl-39752.332Caenorhabditis_elegans
ENSSSCG00000003264CNOT310097.086ENSCJAG00000001094CNOT310097.086Callithrix_jacchus
ENSSSCG00000003264CNOT310097.082ENSCAFG00000002699CNOT310097.082Canis_familiaris
ENSSSCG00000003264CNOT310097.082ENSCAFG00020018359CNOT310097.082Canis_lupus_dingo
ENSSSCG00000003264CNOT39991.501ENSCHIG00000015302CNOT39991.501Capra_hircus
ENSSSCG00000003264CNOT310096.154ENSTSYG00000008058CNOT310096.154Carlito_syrichta
ENSSSCG00000003264CNOT310094.562ENSCAPG00000009533CNOT310094.562Cavia_aperea
ENSSSCG00000003264CNOT310095.358ENSCPOG00000020741CNOT310095.358Cavia_porcellus
ENSSSCG00000003264CNOT310096.821ENSCCAG00000036290CNOT310096.821Cebus_capucinus
ENSSSCG00000003264CNOT310097.082ENSCATG00000030324CNOT310097.082Cercocebus_atys
ENSSSCG00000003264CNOT310093.369ENSCLAG00000003302CNOT310093.369Chinchilla_lanigera
ENSSSCG00000003264CNOT310097.347ENSCSAG00000001900CNOT310097.347Chlorocebus_sabaeus
ENSSSCG00000003264CNOT310081.496ENSCPBG00000011655CNOT310080.526Chrysemys_picta_bellii
ENSSSCG00000003264CNOT310049.054ENSCING00000000293-6868.240Ciona_intestinalis
ENSSSCG00000003264CNOT310097.215ENSCANG00000013408CNOT310097.215Colobus_angolensis_palliatus
ENSSSCG00000003264CNOT310094.297ENSCGRG00001000855Cnot310094.297Cricetulus_griseus_chok1gshd
ENSSSCG00000003264CNOT36085.227ENSCGRG00000012929Cnot37575.573Cricetulus_griseus_crigri
ENSSSCG00000003264CNOT310062.467ENSCSEG00000016892cnot3b6280.592Cynoglossus_semilaevis
ENSSSCG00000003264CNOT38488.852ENSCSEG00000003574cnot3a6888.852Cynoglossus_semilaevis
ENSSSCG00000003264CNOT37390.164ENSCVAG00000022122cnot3b6290.461Cyprinodon_variegatus
ENSSSCG00000003264CNOT39189.508ENSCVAG00000008168cnot3a6988.103Cyprinodon_variegatus
ENSSSCG00000003264CNOT38489.508ENSDARG00000007135cnot3a6888.387Danio_rerio
ENSSSCG00000003264CNOT38888.235ENSDARG00000019842cnot3b6988.235Danio_rerio
ENSSSCG00000003264CNOT310096.552ENSDNOG00000045972CNOT310096.552Dasypus_novemcinctus
ENSSSCG00000003264CNOT310094.164ENSDORG00000008021Cnot310094.164Dipodomys_ordii
ENSSSCG00000003264CNOT37999.329ENSETEG00000006305CNOT371100.000Echinops_telfairi
ENSSSCG00000003264CNOT310097.878ENSEASG00005021591CNOT310097.878Equus_asinus_asinus
ENSSSCG00000003264CNOT310098.011ENSECAG00000023181CNOT310098.011Equus_caballus
ENSSSCG00000003264CNOT38480.909ENSELUG00000014743cnot3a7080.000Esox_lucius
ENSSSCG00000003264CNOT38488.889ENSELUG00000000953cnot3b6688.525Esox_lucius
ENSSSCG00000003264CNOT310096.286ENSFCAG00000014042CNOT310096.286Felis_catus
ENSSSCG00000003264CNOT37589.836ENSFHEG00000001696cnot3b6290.132Fundulus_heteroclitus
ENSSSCG00000003264CNOT37587.869ENSFHEG00000023166cnot3a8483.088Fundulus_heteroclitus
ENSSSCG00000003264CNOT38284.039ENSGMOG00000005365cnot3a6584.039Gadus_morhua
ENSSSCG00000003264CNOT37589.180ENSGAFG00000013094cnot3a6887.781Gambusia_affinis
ENSSSCG00000003264CNOT37288.525ENSGAFG00000003459cnot3b7574.112Gambusia_affinis
ENSSSCG00000003264CNOT38183.987ENSGACG00000011489cnot3a6483.987Gasterosteus_aculeatus
ENSSSCG00000003264CNOT39979.228ENSGAGG00000012677CNOT310078.892Gopherus_agassizii
ENSSSCG00000003264CNOT310097.745ENSGGOG00000012996CNOT310097.745Gorilla_gorilla
ENSSSCG00000003264CNOT38490.132ENSHBUG00000005275cnot3a6889.836Haplochromis_burtoni
ENSSSCG00000003264CNOT36985.253ENSHBUG00000019699cnot3b5785.388Haplochromis_burtoni
ENSSSCG00000003264CNOT310094.430ENSHGLG00000008821CNOT310094.430Heterocephalus_glaber_female
ENSSSCG00000003264CNOT310071.447ENSHGLG00100006181CNOT310081.609Heterocephalus_glaber_male
ENSSSCG00000003264CNOT38489.145ENSHCOG00000020968cnot3a6788.852Hippocampus_comes
ENSSSCG00000003264CNOT39491.398ENSIPUG00000009046cnot3b6791.398Ictalurus_punctatus
ENSSSCG00000003264CNOT39982.119ENSIPUG00000000167cnot37184.194Ictalurus_punctatus
ENSSSCG00000003264CNOT310096.817ENSSTOG00000028248CNOT310096.817Ictidomys_tridecemlineatus
ENSSSCG00000003264CNOT310095.491ENSJJAG00000014594Cnot310095.491Jaculus_jaculus
ENSSSCG00000003264CNOT37291.803ENSKMAG00000018723cnot3b6792.105Kryptolebias_marmoratus
ENSSSCG00000003264CNOT38489.836ENSKMAG00000004863cnot3a7187.108Kryptolebias_marmoratus
ENSSSCG00000003264CNOT38790.492ENSLBEG00000018278cnot3b7189.508Labrus_bergylta
ENSSSCG00000003264CNOT310075.587ENSLACG00000009742CNOT310074.639Latimeria_chalumnae
ENSSSCG00000003264CNOT36494.426ENSLOCG00000000005cnot3b7994.426Lepisosteus_oculatus
ENSSSCG00000003264CNOT310093.878ENSLAFG00000022133CNOT310091.402Loxodonta_africana
ENSSSCG00000003264CNOT310097.082ENSMFAG00000040073CNOT310097.082Macaca_fascicularis
ENSSSCG00000003264CNOT310088.992ENSMMUG00000009698CNOT3100100.000Macaca_mulatta
ENSSSCG00000003264CNOT310096.817ENSMNEG00000036750CNOT310096.817Macaca_nemestrina
ENSSSCG00000003264CNOT310096.698ENSMLEG00000036579CNOT39994.000Mandrillus_leucophaeus
ENSSSCG00000003264CNOT38491.475ENSMAMG00000019357cnot3b6591.776Mastacembelus_armatus
ENSSSCG00000003264CNOT38490.461ENSMAMG00000019397cnot3a6890.164Mastacembelus_armatus
ENSSSCG00000003264CNOT38492.459ENSMZEG00005002466cnot3b6792.763Maylandia_zebra
ENSSSCG00000003264CNOT38490.132ENSMZEG00005016304cnot3a6889.836Maylandia_zebra
ENSSSCG00000003264CNOT310094.164ENSMAUG00000014996Cnot310094.164Mesocricetus_auratus
ENSSSCG00000003264CNOT310096.552ENSMICG00000002370CNOT310096.552Microcebus_murinus
ENSSSCG00000003264CNOT38093.110ENSMOCG00000013249Cnot399100.000Microtus_ochrogaster
ENSSSCG00000003264CNOT37485.827ENSMMOG00000016446cnot3a6784.918Mola_mola
ENSSSCG00000003264CNOT36088.285ENSMMOG00000013086cnot3b7387.917Mola_mola
ENSSSCG00000003264CNOT310086.905ENSMODG00000004066CNOT310086.772Monodelphis_domestica
ENSSSCG00000003264CNOT38488.852ENSMALG00000009204cnot3a6888.852Monopterus_albus
ENSSSCG00000003264CNOT310094.430MGP_CAROLIEiJ_G0029095Cnot310099.000Mus_caroli
ENSSSCG00000003264CNOT310094.430ENSMUSG00000035632Cnot310099.000Mus_musculus
ENSSSCG00000003264CNOT310094.164MGP_PahariEiJ_G0020964Cnot310099.000Mus_pahari
ENSSSCG00000003264CNOT310094.430MGP_SPRETEiJ_G0030148Cnot310099.000Mus_spretus
ENSSSCG00000003264CNOT310096.419ENSMPUG00000010352CNOT310096.419Mustela_putorius_furo
ENSSSCG00000003264CNOT310094.960ENSNGAG00000013266Cnot310094.960Nannospalax_galili
ENSSSCG00000003264CNOT39964.935ENSNBRG00000003336cnot3b7287.611Neolamprologus_brichardi
ENSSSCG00000003264CNOT37890.157ENSNBRG00000002401cnot3a6390.157Neolamprologus_brichardi
ENSSSCG00000003264CNOT310090.789ENSNLEG00000006272CNOT310090.789Nomascus_leucogenys
ENSSSCG00000003264CNOT387100.000ENSMEUG00000002952CNOT378100.000Notamacropus_eugenii
ENSSSCG00000003264CNOT364100.000ENSOPRG00000001605-66100.000Ochotona_princeps
ENSSSCG00000003264CNOT310094.430ENSODEG00000000705CNOT310094.430Octodon_degus
ENSSSCG00000003264CNOT38490.132ENSONIG00000006568cnot3a7089.836Oreochromis_niloticus
ENSSSCG00000003264CNOT37292.131ENSONIG00000007047cnot3b6792.434Oreochromis_niloticus
ENSSSCG00000003264CNOT310096.021ENSOCUG00000007691CNOT310096.021Oryctolagus_cuniculus
ENSSSCG00000003264CNOT38489.836ENSORLG00000011174cnot3a6889.836Oryzias_latipes
ENSSSCG00000003264CNOT37191.803ENSORLG00000005982cnot3b6892.105Oryzias_latipes
ENSSSCG00000003264CNOT37191.803ENSORLG00020005779cnot3b6792.105Oryzias_latipes_hni
ENSSSCG00000003264CNOT38489.508ENSORLG00020008009cnot3a6889.508Oryzias_latipes_hni
ENSSSCG00000003264CNOT37191.803ENSORLG00015019021cnot3b6792.105Oryzias_latipes_hsok
ENSSSCG00000003264CNOT38489.508ENSORLG00015013729cnot3a6889.508Oryzias_latipes_hsok
ENSSSCG00000003264CNOT39384.615ENSOMEG00000015557cnot3b6891.118Oryzias_melastigma
ENSSSCG00000003264CNOT38489.836ENSOMEG00000010309cnot3a6889.836Oryzias_melastigma
ENSSSCG00000003264CNOT310097.082ENSOGAG00000006945CNOT310097.082Otolemur_garnettii
ENSSSCG00000003264CNOT38569.876ENSOARG00000002981CNOT39569.876Ovis_aries
ENSSSCG00000003264CNOT310097.745ENSPPAG00000002748CNOT310097.745Pan_paniscus
ENSSSCG00000003264CNOT310096.286ENSPPRG00000011705CNOT310096.286Panthera_pardus
ENSSSCG00000003264CNOT377100.000ENSPTIG00000008781CNOT3100100.000Panthera_tigris_altaica
ENSSSCG00000003264CNOT310097.745ENSPTRG00000046717-10097.745Pan_troglodytes
ENSSSCG00000003264CNOT310097.745ENSPTRG00000011444CNOT310097.745Pan_troglodytes
ENSSSCG00000003264CNOT310097.215ENSPANG00000009375CNOT310097.215Papio_anubis
ENSSSCG00000003264CNOT36394.872ENSPKIG00000015967-7894.872Paramormyrops_kingsleyae
ENSSSCG00000003264CNOT38991.475ENSPKIG00000011733CNOT37190.323Paramormyrops_kingsleyae
ENSSSCG00000003264CNOT37082.807ENSPMGG00000022539cnot3b6579.933Periophthalmus_magnuspinnatus
ENSSSCG00000003264CNOT310094.164ENSPEMG00000024185Cnot310094.164Peromyscus_maniculatus_bairdii
ENSSSCG00000003264CNOT310085.809ENSPCIG00000023018CNOT39399.283Phascolarctos_cinereus
ENSSSCG00000003264CNOT38489.180ENSPFOG00000007168cnot3b7574.112Poecilia_formosa
ENSSSCG00000003264CNOT39389.180ENSPFOG00000008693cnot3a10066.536Poecilia_formosa
ENSSSCG00000003264CNOT39983.882ENSPLAG00000013457cnot3b7574.112Poecilia_latipinna
ENSSSCG00000003264CNOT39389.180ENSPLAG00000013324cnot3a6887.781Poecilia_latipinna
ENSSSCG00000003264CNOT39983.882ENSPMEG00000010184cnot3b7574.112Poecilia_mexicana
ENSSSCG00000003264CNOT39389.180ENSPMEG00000017718cnot3a6887.781Poecilia_mexicana
ENSSSCG00000003264CNOT38488.197ENSPREG00000007592cnot3a8686.381Poecilia_reticulata
ENSSSCG00000003264CNOT39978.827ENSPREG00000000662cnot3b6878.827Poecilia_reticulata
ENSSSCG00000003264CNOT310097.613ENSPPYG00000010372CNOT310097.613Pongo_abelii
ENSSSCG00000003264CNOT37798.305ENSPCAG00000011999CNOT37498.305Procavia_capensis
ENSSSCG00000003264CNOT310096.817ENSPCOG00000017673CNOT310096.817Propithecus_coquereli
ENSSSCG00000003264CNOT310092.980ENSPVAG00000015564CNOT310092.980Pteropus_vampyrus
ENSSSCG00000003264CNOT38490.132ENSPNYG00000002282cnot3a6889.836Pundamilia_nyererei
ENSSSCG00000003264CNOT36986.469ENSPNYG00000003358cnot3b5786.755Pundamilia_nyererei
ENSSSCG00000003264CNOT37588.852ENSPNAG00000017679cnot3a7287.742Pygocentrus_nattereri
ENSSSCG00000003264CNOT39790.164ENSPNAG00000027459cnot3b6890.461Pygocentrus_nattereri
ENSSSCG00000003264CNOT310094.297ENSRNOG00000053234Cnot310094.297Rattus_norvegicus
ENSSSCG00000003264CNOT310097.082ENSRBIG00000031025CNOT310097.082Rhinopithecus_bieti
ENSSSCG00000003264CNOT310097.215ENSRROG00000003872CNOT310097.215Rhinopithecus_roxellana
ENSSSCG00000003264CNOT310096.954ENSSBOG00000030268CNOT310096.954Saimiri_boliviensis_boliviensis
ENSSSCG00000003264CNOT38491.475ENSSFOG00015000248cnot37190.032Scleropages_formosus
ENSSSCG00000003264CNOT38491.475ENSSFOG00015019203-6891.776Scleropages_formosus
ENSSSCG00000003264CNOT37292.131ENSSMAG00000016031cnot3b6692.434Scophthalmus_maximus
ENSSSCG00000003264CNOT38489.803ENSSMAG00000013235cnot3a6789.508Scophthalmus_maximus
ENSSSCG00000003264CNOT38492.459ENSSDUG00000003428cnot3b6592.763Seriola_dumerili
ENSSSCG00000003264CNOT37589.216ENSSDUG00000008181cnot3a10085.551Seriola_dumerili
ENSSSCG00000003264CNOT37292.459ENSSLDG00000014376cnot3b6592.763Seriola_lalandi_dorsalis
ENSSSCG00000003264CNOT38190.461ENSSLDG00000014733cnot3a6690.164Seriola_lalandi_dorsalis
ENSSSCG00000003264CNOT35489.606ENSSARG00000005649-6489.606Sorex_araneus
ENSSSCG00000003264CNOT310082.011ENSSPUG00000008510CNOT310081.349Sphenodon_punctatus
ENSSSCG00000003264CNOT38189.803ENSSPAG00000003858cnot3a6589.508Stegastes_partitus
ENSSSCG00000003264CNOT38491.475ENSSPAG00000001429cnot3b6691.776Stegastes_partitus
ENSSSCG00000003264CNOT38490.461ENSTRUG00000015732cnot3a6890.164Takifugu_rubripes
ENSSSCG00000003264CNOT36792.131ENSTRUG00000007248cnot3b6292.434Takifugu_rubripes
ENSSSCG00000003264CNOT38190.604ENSTNIG00000008082cnot3a6590.604Tetraodon_nigroviridis
ENSSSCG00000003264CNOT36792.434ENSTNIG00000005663cnot3b6692.434Tetraodon_nigroviridis
ENSSSCG00000003264CNOT350100.000ENSTBEG00000009620-54100.000Tupaia_belangeri
ENSSSCG00000003264CNOT371100.000ENSTTRG00000006567CNOT378100.000Tursiops_truncatus
ENSSSCG00000003264CNOT310096.419ENSUAMG00000005234CNOT310096.419Ursus_americanus
ENSSSCG00000003264CNOT38698.322ENSUMAG00000010934CNOT310098.208Ursus_maritimus
ENSSSCG00000003264CNOT310096.069ENSVVUG00000008239CNOT39996.537Vulpes_vulpes
ENSSSCG00000003264CNOT39197.403ENSXETG00000003166cnot310076.540Xenopus_tropicalis
ENSSSCG00000003264CNOT37488.976ENSXCOG00000018976cnot3b6982.951Xiphophorus_couchianus
ENSSSCG00000003264CNOT37587.255ENSXCOG00000019460cnot3a9893.162Xiphophorus_couchianus
ENSSSCG00000003264CNOT38489.180ENSXMAG00000014176cnot3b7574.112Xiphophorus_maculatus
ENSSSCG00000003264CNOT37589.180ENSXMAG00000012273cnot3a6987.781Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us