EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000003268 (Gene tree)
Gene ID: 100518973
Gene Symbol: TSEN34
Alias: LENG5|SEN34|SEN34L
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 12186 bases
Position: chr6:55927308-55939493
Accession: 100518973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000003544	tRNA_int_endo	PF01974.17	2.7e-20	1	1
ENSSSCP00000047113	tRNA_int_endo	PF01974.17	2.7e-20	1	1
ENSSSCP00000050113	tRNA_int_endo	PF01974.17	2.7e-20	1	1
ENSSSCP00000047206	tRNA_int_endo	PF01974.17	2.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000062063	TSEN34-201	4658	XM_021094863	ENSSSCP00000050113	313 (aa)	XP_020950522	A0A287B1K2
ENSSSCT00000003629	TSEN34-203	1389	XM_021094869	ENSSSCP00000003544	311 (aa)	XP_020950528	F1RNG9
ENSSSCT00000058914	TSEN34-204	1423	XM_021094861	ENSSSCP00000047206	326 (aa)	XP_020950520	A0A287ASZ6
ENSSSCT00000065528	TSEN34-202	1506	XM_021094868	ENSSSCP00000047113	311 (aa)	XP_020950527	F1RNG9

Gene Model

Click here to download ENSSSCG00000003268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000003268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000003268	TSEN34	100	89.389	ENSG00000170892	TSEN34	100	89.068	Homo_sapiens
ENSSSCG00000003268	TSEN34	98	32.808	ENSAPOG00000008579	-	93	36.177	Acanthochromis_polyacanthus
ENSSSCG00000003268	TSEN34	94	35.836	ENSAPOG00000012557	-	86	35.836	Acanthochromis_polyacanthus
ENSSSCG00000003268	TSEN34	99	37.540	ENSAPOG00000001248	tsen34	93	37.540	Acanthochromis_polyacanthus
ENSSSCG00000003268	TSEN34	92	93.684	ENSAMEG00000004585	TSEN34	100	92.632	Ailuropoda_melanoleuca
ENSSSCG00000003268	TSEN34	99	39.812	ENSACIG00000007110	tsen34	87	39.812	Amphilophus_citrinellus
ENSSSCG00000003268	TSEN34	99	39.871	ENSAOCG00000006905	tsen34	93	38.907	Amphiprion_ocellaris
ENSSSCG00000003268	TSEN34	99	40.193	ENSAPEG00000019171	tsen34	93	39.228	Amphiprion_percula
ENSSSCG00000003268	TSEN34	99	36.656	ENSATEG00000019800	tsen34	97	35.110	Anabas_testudineus
ENSSSCG00000003268	TSEN34	100	45.455	ENSACAG00000016189	TSEN34	100	45.455	Anolis_carolinensis
ENSSSCG00000003268	TSEN34	100	90.675	ENSANAG00000026113	TSEN34	100	90.032	Aotus_nancymaae
ENSSSCG00000003268	TSEN34	99	38.907	ENSAMXG00000017568	tsen34	86	38.907	Astyanax_mexicanus
ENSSSCG00000003268	TSEN34	100	93.610	ENSBTAG00000006486	TSEN34	100	92.652	Bos_taurus
ENSSSCG00000003268	TSEN34	100	88.103	ENSCJAG00000001128	TSEN34	100	87.781	Callithrix_jacchus
ENSSSCG00000003268	TSEN34	100	94.249	ENSCAFG00000002675	TSEN34	100	93.291	Canis_familiaris
ENSSSCG00000003268	TSEN34	100	94.212	ENSCAFG00020018350	TSEN34	100	93.248	Canis_lupus_dingo
ENSSSCG00000003268	TSEN34	100	88.424	ENSCHIG00000020705	TSEN34	100	87.342	Capra_hircus
ENSSSCG00000003268	TSEN34	98	88.525	ENSTSYG00000028200	TSEN34	98	87.541	Carlito_syrichta
ENSSSCG00000003268	TSEN34	66	78.922	ENSCAPG00000012811	-	99	78.431	Cavia_aperea
ENSSSCG00000003268	TSEN34	99	83.280	ENSCPOG00000012672	TSEN34	99	82.958	Cavia_porcellus
ENSSSCG00000003268	TSEN34	100	90.675	ENSCCAG00000036023	TSEN34	100	90.032	Cebus_capucinus
ENSSSCG00000003268	TSEN34	96	87.919	ENSCATG00000033390	TSEN34	95	86.711	Cercocebus_atys
ENSSSCG00000003268	TSEN34	100	85.209	ENSCLAG00000000618	TSEN34	100	85.209	Chinchilla_lanigera
ENSSSCG00000003268	TSEN34	100	88.746	ENSCSAG00000001891	TSEN34	100	88.103	Chlorocebus_sabaeus
ENSSSCG00000003268	TSEN34	100	89.068	ENSCANG00000040984	TSEN34	100	88.424	Colobus_angolensis_palliatus
ENSSSCG00000003268	TSEN34	100	88.254	ENSCGRG00001006296	Tsen34	100	87.937	Cricetulus_griseus_chok1gshd
ENSSSCG00000003268	TSEN34	68	79.018	ENSCGRG00000008494	Tsen34	100	80.591	Cricetulus_griseus_crigri
ENSSSCG00000003268	TSEN34	96	39.867	ENSCSEG00000006278	tsen34	86	39.535	Cynoglossus_semilaevis
ENSSSCG00000003268	TSEN34	99	38.486	ENSDARG00000061370	tsen34	92	38.110	Danio_rerio
ENSSSCG00000003268	TSEN34	100	90.032	ENSDNOG00000039332	TSEN34	100	89.068	Dasypus_novemcinctus
ENSSSCG00000003268	TSEN34	100	85.623	ENSDORG00000029071	Tsen34	100	85.623	Dipodomys_ordii
ENSSSCG00000003268	TSEN34	100	93.248	ENSEASG00005021580	TSEN34	100	91.961	Equus_asinus_asinus
ENSSSCG00000003268	TSEN34	100	93.569	ENSECAG00000019651	TSEN34	86	92.283	Equus_caballus
ENSSSCG00000003268	TSEN34	60	82.812	ENSEEUG00000005692	TSEN34	66	81.283	Erinaceus_europaeus
ENSSSCG00000003268	TSEN34	99	37.304	ENSELUG00000006262	tsen34	93	37.346	Esox_lucius
ENSSSCG00000003268	TSEN34	100	93.248	ENSFCAG00000014045	TSEN34	100	92.605	Felis_catus
ENSSSCG00000003268	TSEN34	84	80.916	ENSFDAG00000017995	TSEN34	100	80.916	Fukomys_damarensis
ENSSSCG00000003268	TSEN34	99	39.159	ENSGAFG00000016880	tsen34	93	38.710	Gambusia_affinis
ENSSSCG00000003268	TSEN34	99	36.875	ENSGACG00000004800	tsen34	99	36.909	Gasterosteus_aculeatus
ENSSSCG00000003268	TSEN34	100	46.875	ENSGAGG00000008982	TSEN34	73	46.875	Gopherus_agassizii
ENSSSCG00000003268	TSEN34	100	89.389	ENSGGOG00000008197	TSEN34	100	89.068	Gorilla_gorilla
ENSSSCG00000003268	TSEN34	100	85.987	ENSHGLG00000017619	TSEN34	100	85.032	Heterocephalus_glaber_female
ENSSSCG00000003268	TSEN34	100	69.108	ENSHGLG00100008719	TSEN34	100	69.592	Heterocephalus_glaber_male
ENSSSCG00000003268	TSEN34	96	39.803	ENSHCOG00000001368	tsen34	92	39.073	Hippocampus_comes
ENSSSCG00000003268	TSEN34	96	37.942	ENSIPUG00000008359	tsen34	85	37.621	Ictalurus_punctatus
ENSSSCG00000003268	TSEN34	100	87.460	ENSSTOG00000023816	TSEN34	100	86.817	Ictidomys_tridecemlineatus
ENSSSCG00000003268	TSEN34	100	86.984	ENSJJAG00000016301	Tsen34	100	86.667	Jaculus_jaculus
ENSSSCG00000003268	TSEN34	99	40.317	ENSKMAG00000007181	tsen34	82	41.368	Kryptolebias_marmoratus
ENSSSCG00000003268	TSEN34	99	39.048	ENSLBEG00000015001	tsen34	94	39.048	Labrus_bergylta
ENSSSCG00000003268	TSEN34	75	44.538	ENSLACG00000013346	-	100	44.583	Latimeria_chalumnae
ENSSSCG00000003268	TSEN34	99	38.511	ENSLOCG00000001887	tsen34	97	38.835	Lepisosteus_oculatus
ENSSSCG00000003268	TSEN34	100	88.644	ENSLAFG00000015215	TSEN34	100	88.328	Loxodonta_africana
ENSSSCG00000003268	TSEN34	100	89.068	ENSMFAG00000044825	TSEN34	100	88.424	Macaca_fascicularis
ENSSSCG00000003268	TSEN34	100	89.068	ENSMMUG00000016571	TSEN34	100	88.424	Macaca_mulatta
ENSSSCG00000003268	TSEN34	100	89.068	ENSMNEG00000045457	TSEN34	100	88.424	Macaca_nemestrina
ENSSSCG00000003268	TSEN34	96	73.154	ENSMLEG00000034295	TSEN34	94	72.093	Mandrillus_leucophaeus
ENSSSCG00000003268	TSEN34	99	37.460	ENSMAMG00000018407	tsen34	95	37.460	Mastacembelus_armatus
ENSSSCG00000003268	TSEN34	81	84.980	ENSMAUG00000019716	Tsen34	81	84.980	Mesocricetus_auratus
ENSSSCG00000003268	TSEN34	100	92.283	ENSMICG00000002409	TSEN34	100	91.640	Microcebus_murinus
ENSSSCG00000003268	TSEN34	100	85.849	ENSMOCG00000022190	Tsen34	100	87.107	Microtus_ochrogaster
ENSSSCG00000003268	TSEN34	99	38.065	ENSMMOG00000009551	tsen34	99	37.097	Mola_mola
ENSSSCG00000003268	TSEN34	99	60.000	ENSMODG00000003984	-	77	60.372	Monodelphis_domestica
ENSSSCG00000003268	TSEN34	99	38.170	ENSMALG00000018918	tsen34	92	38.769	Monopterus_albus
ENSSSCG00000003268	TSEN34	100	87.179	MGP_CAROLIEiJ_G0029099	Tsen34	100	87.179	Mus_caroli
ENSSSCG00000003268	TSEN34	100	87.821	ENSMUSG00000035585	Tsen34	100	87.821	Mus_musculus
ENSSSCG00000003268	TSEN34	100	87.540	MGP_PahariEiJ_G0020968	Tsen34	100	86.984	Mus_pahari
ENSSSCG00000003268	TSEN34	100	87.500	MGP_SPRETEiJ_G0030152	Tsen34	100	87.500	Mus_spretus
ENSSSCG00000003268	TSEN34	100	93.248	ENSMPUG00000010373	TSEN34	100	93.248	Mustela_putorius_furo
ENSSSCG00000003268	TSEN34	100	92.971	ENSMLUG00000016894	TSEN34	100	92.332	Myotis_lucifugus
ENSSSCG00000003268	TSEN34	85	83.019	ENSNGAG00000016187	Tsen34	97	83.019	Nannospalax_galili
ENSSSCG00000003268	TSEN34	100	88.746	ENSNLEG00000006309	TSEN34	100	89.068	Nomascus_leucogenys
ENSSSCG00000003268	TSEN34	99	63.141	ENSMEUG00000002978	TSEN34	99	62.821	Notamacropus_eugenii
ENSSSCG00000003268	TSEN34	100	81.447	ENSODEG00000000096	TSEN34	100	80.757	Octodon_degus
ENSSSCG00000003268	TSEN34	76	54.852	ENSOANG00000014747	-	99	52.675	Ornithorhynchus_anatinus
ENSSSCG00000003268	TSEN34	99	38.585	ENSORLG00015012740	tsen34	94	38.585	Oryzias_latipes_hsok
ENSSSCG00000003268	TSEN34	100	90.354	ENSOGAG00000006966	TSEN34	100	89.711	Otolemur_garnettii
ENSSSCG00000003268	TSEN34	91	88.380	ENSOARG00000002763	TSEN34	95	87.324	Ovis_aries
ENSSSCG00000003268	TSEN34	100	89.068	ENSPPAG00000036935	TSEN34	100	88.746	Pan_paniscus
ENSSSCG00000003268	TSEN34	100	93.569	ENSPPRG00000011779	TSEN34	100	92.926	Panthera_pardus
ENSSSCG00000003268	TSEN34	100	89.389	ENSPTRG00000044768	-	100	89.068	Pan_troglodytes
ENSSSCG00000003268	TSEN34	100	89.389	ENSPTRG00000011448	TSEN34	100	89.068	Pan_troglodytes
ENSSSCG00000003268	TSEN34	100	89.389	ENSPANG00000012101	TSEN34	100	88.746	Papio_anubis
ENSSSCG00000003268	TSEN34	96	38.387	ENSPKIG00000014674	tsen34	90	38.387	Paramormyrops_kingsleyae
ENSSSCG00000003268	TSEN34	100	88.424	ENSPEMG00000014535	Tsen34	100	88.424	Peromyscus_maniculatus_bairdii
ENSSSCG00000003268	TSEN34	99	38.170	ENSPFOG00000008679	tsen34	93	40.129	Poecilia_formosa
ENSSSCG00000003268	TSEN34	99	38.608	ENSPLAG00000017309	tsen34	97	38.095	Poecilia_latipinna
ENSSSCG00000003268	TSEN34	99	38.170	ENSPMEG00000005235	tsen34	93	40.129	Poecilia_mexicana
ENSSSCG00000003268	TSEN34	99	39.677	ENSPREG00000021784	tsen34	93	39.677	Poecilia_reticulata
ENSSSCG00000003268	TSEN34	100	89.389	ENSPPYG00000010376	TSEN34	97	88.679	Pongo_abelii
ENSSSCG00000003268	TSEN34	99	90.000	ENSPCAG00000012359	TSEN34	100	89.355	Procavia_capensis
ENSSSCG00000003268	TSEN34	100	92.605	ENSPCOG00000013843	TSEN34	100	91.961	Propithecus_coquereli
ENSSSCG00000003268	TSEN34	100	88.103	ENSPVAG00000015570	TSEN34	100	87.138	Pteropus_vampyrus
ENSSSCG00000003268	TSEN34	99	35.647	ENSPNAG00000028698	tsen34	87	35.514	Pygocentrus_nattereri
ENSSSCG00000003268	TSEN34	100	87.821	ENSRNOG00000059572	Tsen34l1	100	87.821	Rattus_norvegicus
ENSSSCG00000003268	TSEN34	100	87.821	ENSRNOG00000055179	Tsen34	100	87.821	Rattus_norvegicus
ENSSSCG00000003268	TSEN34	100	89.068	ENSRBIG00000034430	TSEN34	100	88.424	Rhinopithecus_bieti
ENSSSCG00000003268	TSEN34	100	89.389	ENSRROG00000024217	TSEN34	100	88.746	Rhinopithecus_roxellana
ENSSSCG00000003268	TSEN34	96	90.268	ENSSBOG00000016017	TSEN34	97	89.562	Saimiri_boliviensis_boliviensis
ENSSSCG00000003268	TSEN34	70	58.986	ENSSHAG00000009295	-	99	60.444	Sarcophilus_harrisii
ENSSSCG00000003268	TSEN34	72	36.607	ENSSFOG00015017579	tsen34	58	47.857	Scleropages_formosus
ENSSSCG00000003268	TSEN34	96	38.870	ENSSMAG00000005214	tsen34	93	39.535	Scophthalmus_maximus
ENSSSCG00000003268	TSEN34	99	38.907	ENSSDUG00000005391	tsen34	93	38.750	Seriola_dumerili
ENSSSCG00000003268	TSEN34	99	40.193	ENSSLDG00000006144	tsen34	88	40.193	Seriola_lalandi_dorsalis
ENSSSCG00000003268	TSEN34	94	82.492	ENSSARG00000005857	TSEN34	79	81.081	Sorex_araneus
ENSSSCG00000003268	TSEN34	100	42.633	ENSSPUG00000008447	TSEN34	100	43.574	Sphenodon_punctatus
ENSSSCG00000003268	TSEN34	99	38.585	ENSSPAG00000010512	tsen34	92	38.188	Stegastes_partitus
ENSSSCG00000003268	TSEN34	99	38.924	ENSTNIG00000011201	tsen34	99	39.498	Tetraodon_nigroviridis
ENSSSCG00000003268	TSEN34	100	95.498	ENSTTRG00000006571	TSEN34	100	94.534	Tursiops_truncatus
ENSSSCG00000003268	TSEN34	100	94.855	ENSUAMG00000008701	TSEN34	100	93.569	Ursus_americanus
ENSSSCG00000003268	TSEN34	100	93.891	ENSVVUG00000008211	TSEN34	100	92.926	Vulpes_vulpes
ENSSSCG00000003268	TSEN34	100	42.633	ENSXETG00000004597	tsen34	100	43.810	Xenopus_tropicalis
ENSSSCG00000003268	TSEN34	99	41.424	ENSXMAG00000024266	tsen34	93	40.129	Xiphophorus_maculatus