EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000003366 (Gene tree)
Gene ID: 100738053
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 70057 bases
Position: chr6:67016987-67087043
Accession: 100738053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000003650	ResIII	PF04851.15	5.8e-08	1	1
ENSSSCP00000019043	ResIII	PF04851.15	6.6e-08	1	1
ENSSSCP00000031438	ResIII	PF04851.15	6.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000042706	CHD5-201	10180	-	ENSSSCP00000031438	1973 (aa)	-	A0A286ZJ13
ENSSSCT00000003736	CHD5-203	8946	-	ENSSSCP00000003650	1813 (aa)	-	F1RIM3
ENSSSCT00000019561	CHD5-202	10102	XM_021095234	ENSSSCP00000019043	1947 (aa)	XP_020950893	F1SSZ2

Gene Model

Click here to download ENSSSCG00000003366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000003366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000003366	CHD5	98	71.444	ENSSSCG00000021363	CHD3	99	70.498
ENSSSCG00000003366	CHD5	78	75.711	ENSSSCG00000000697	-	96	71.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000003366	CHD5	100	96.973	ENSG00000116254	CHD5	98	96.917	Homo_sapiens
ENSSSCG00000003366	CHD5	99	96.861	ENSAMEG00000009880	CHD5	98	96.771	Ailuropoda_melanoleuca
ENSSSCG00000003366	CHD5	99	78.560	ENSACIG00000012582	chd5	97	77.814	Amphilophus_citrinellus
ENSSSCG00000003366	CHD5	99	78.834	ENSAOCG00000020356	chd5	90	78.919	Amphiprion_ocellaris
ENSSSCG00000003366	CHD5	98	82.082	ENSAPLG00000015475	CHD5	98	81.035	Anas_platyrhynchos
ENSSSCG00000003366	CHD5	100	84.624	ENSACAG00000002441	CHD5	94	83.774	Anolis_carolinensis
ENSSSCG00000003366	CHD5	93	97.221	ENSANAG00000001078	CHD5	97	91.330	Aotus_nancymaae
ENSSSCG00000003366	CHD5	99	74.932	ENSACLG00000003012	chd5	90	80.836	Astatotilapia_calliptera
ENSSSCG00000003366	CHD5	93	80.514	ENSAMXG00000008921	chd5	95	85.057	Astyanax_mexicanus
ENSSSCG00000003366	CHD5	100	98.185	ENSBTAG00000040477	CHD5	100	98.185	Bos_taurus
ENSSSCG00000003366	CHD5	100	97.248	ENSCJAG00000000101	CHD5	98	96.970	Callithrix_jacchus
ENSSSCG00000003366	CHD5	100	97.744	ENSCAFG00000019545	CHD5	100	97.744	Canis_familiaris
ENSSSCG00000003366	CHD5	99	97.796	ENSCAFG00020008689	CHD5	95	97.597	Canis_lupus_dingo
ENSSSCG00000003366	CHD5	99	96.002	ENSCHIG00000015027	CHD5	99	94.402	Capra_hircus
ENSSSCG00000003366	CHD5	99	91.867	ENSTSYG00000033991	CHD5	97	91.952	Carlito_syrichta
ENSSSCG00000003366	CHD5	100	95.762	ENSCAPG00000009294	CHD5	98	95.488	Cavia_aperea
ENSSSCG00000003366	CHD5	100	95.872	ENSCPOG00000025080	CHD5	98	95.594	Cavia_porcellus
ENSSSCG00000003366	CHD5	100	96.863	ENSCCAG00000024756	CHD5	98	96.761	Cebus_capucinus
ENSSSCG00000003366	CHD5	100	97.138	ENSCATG00000043011	CHD5	98	95.977	Cercocebus_atys
ENSSSCG00000003366	CHD5	100	96.037	ENSCLAG00000010589	CHD5	99	94.900	Chinchilla_lanigera
ENSSSCG00000003366	CHD5	100	97.028	ENSCSAG00000000733	CHD5	98	96.970	Chlorocebus_sabaeus
ENSSSCG00000003366	CHD5	100	90.724	ENSCPBG00000019363	CHD5	100	90.615	Chrysemys_picta_bellii
ENSSSCG00000003366	CHD5	100	97.083	ENSCANG00000032302	CHD5	97	97.088	Colobus_angolensis_palliatus
ENSSSCG00000003366	CHD5	55	97.581	ENSCGRG00001011042	Chd5	100	97.358	Cricetulus_griseus_chok1gshd
ENSSSCG00000003366	CHD5	100	95.817	ENSCGRG00000011341	Chd5	99	95.003	Cricetulus_griseus_crigri
ENSSSCG00000003366	CHD5	98	67.747	ENSDARG00000025789	chd4b	98	65.918	Danio_rerio
ENSSSCG00000003366	CHD5	99	78.240	ENSDARG00000105083	chd5	97	78.675	Danio_rerio
ENSSSCG00000003366	CHD5	95	96.306	ENSDNOG00000046342	CHD5	98	91.797	Dasypus_novemcinctus
ENSSSCG00000003366	CHD5	100	95.932	ENSDORG00000005923	Chd5	98	95.652	Dipodomys_ordii
ENSSSCG00000003366	CHD5	99	95.978	ENSEASG00005021464	CHD5	98	97.934	Equus_asinus_asinus
ENSSSCG00000003366	CHD5	99	95.537	ENSECAG00000025043	CHD5	98	98.790	Equus_caballus
ENSSSCG00000003366	CHD5	74	100.000	ENSEEUG00000002772	CHD5	75	100.000	Erinaceus_europaeus
ENSSSCG00000003366	CHD5	99	76.467	ENSELUG00000010742	chd5	90	90.455	Esox_lucius
ENSSSCG00000003366	CHD5	100	97.468	ENSFCAG00000006319	CHD5	98	97.283	Felis_catus
ENSSSCG00000003366	CHD5	99	89.682	ENSFALG00000009740	CHD5	98	87.670	Ficedula_albicollis
ENSSSCG00000003366	CHD5	99	95.647	ENSFDAG00000012881	CHD5	96	94.788	Fukomys_damarensis
ENSSSCG00000003366	CHD5	100	89.237	ENSGALG00000000747	CHD5	98	86.778	Gallus_gallus
ENSSSCG00000003366	CHD5	59	82.609	ENSGACG00000004389	chd5	93	83.105	Gasterosteus_aculeatus
ENSSSCG00000003366	CHD5	100	88.022	ENSGAGG00000001590	CHD5	99	95.146	Gopherus_agassizii
ENSSSCG00000003366	CHD5	100	97.028	ENSGGOG00000000708	CHD5	98	97.032	Gorilla_gorilla
ENSSSCG00000003366	CHD5	99	76.538	ENSHBUG00000013453	chd5	90	91.163	Haplochromis_burtoni
ENSSSCG00000003366	CHD5	100	95.927	ENSHGLG00000018184	CHD5	98	95.507	Heterocephalus_glaber_female
ENSSSCG00000003366	CHD5	100	88.792	ENSHGLG00100013261	CHD5	98	88.098	Heterocephalus_glaber_male
ENSSSCG00000003366	CHD5	99	78.497	ENSIPUG00000005446	chd5	97	77.132	Ictalurus_punctatus
ENSSSCG00000003366	CHD5	100	96.918	ENSSTOG00000002778	CHD5	100	96.518	Ictidomys_tridecemlineatus
ENSSSCG00000003366	CHD5	100	95.872	ENSJJAG00000019072	Chd5	98	95.559	Jaculus_jaculus
ENSSSCG00000003366	CHD5	99	81.947	ENSLOCG00000004944	chd5	94	80.085	Lepisosteus_oculatus
ENSSSCG00000003366	CHD5	99	97.190	ENSLAFG00000006348	CHD5	98	97.034	Loxodonta_africana
ENSSSCG00000003366	CHD5	100	97.083	ENSMFAG00000033993	CHD5	100	97.083	Macaca_fascicularis
ENSSSCG00000003366	CHD5	100	97.028	ENSMMUG00000016838	CHD5	99	96.523	Macaca_mulatta
ENSSSCG00000003366	CHD5	100	97.083	ENSMNEG00000040044	CHD5	98	97.022	Macaca_nemestrina
ENSSSCG00000003366	CHD5	100	93.380	ENSMLEG00000039166	CHD5	98	93.455	Mandrillus_leucophaeus
ENSSSCG00000003366	CHD5	99	74.823	ENSMZEG00005000841	chd5	90	80.151	Maylandia_zebra
ENSSSCG00000003366	CHD5	99	89.297	ENSMGAG00000001055	CHD5	98	87.063	Meleagris_gallopavo
ENSSSCG00000003366	CHD5	100	92.889	ENSMICG00000017862	CHD5	98	95.746	Microcebus_murinus
ENSSSCG00000003366	CHD5	100	95.707	ENSMOCG00000011049	Chd5	100	94.874	Microtus_ochrogaster
ENSSSCG00000003366	CHD5	92	80.642	ENSMODG00000006294	CHD5	79	93.995	Monodelphis_domestica
ENSSSCG00000003366	CHD5	99	78.384	ENSMALG00000002831	chd5	95	77.960	Monopterus_albus
ENSSSCG00000003366	CHD5	100	95.652	MGP_CAROLIEiJ_G0026857	Chd5	100	94.567	Mus_caroli
ENSSSCG00000003366	CHD5	100	95.597	ENSMUSG00000005045	Chd5	100	94.012	Mus_musculus
ENSSSCG00000003366	CHD5	100	95.542	MGP_PahariEiJ_G0029205	Chd5	100	94.464	Mus_pahari
ENSSSCG00000003366	CHD5	100	95.597	MGP_SPRETEiJ_G0027850	Chd5	100	94.413	Mus_spretus
ENSSSCG00000003366	CHD5	100	93.340	ENSMPUG00000007122	CHD5	95	95.951	Mustela_putorius_furo
ENSSSCG00000003366	CHD5	99	95.482	ENSNGAG00000019812	Chd5	94	95.170	Nannospalax_galili
ENSSSCG00000003366	CHD5	100	94.717	ENSNLEG00000010320	CHD5	98	94.586	Nomascus_leucogenys
ENSSSCG00000003366	CHD5	87	92.157	ENSOPRG00000004304	CHD5	85	89.535	Ochotona_princeps
ENSSSCG00000003366	CHD5	100	95.652	ENSODEG00000010262	CHD5	98	95.382	Octodon_degus
ENSSSCG00000003366	CHD5	99	77.221	ENSONIG00000000619	chd5	93	77.097	Oreochromis_niloticus
ENSSSCG00000003366	CHD5	99	71.619	ENSOANG00000001819	CHD5	96	71.789	Ornithorhynchus_anatinus
ENSSSCG00000003366	CHD5	99	97.137	ENSOGAG00000005703	CHD5	98	94.830	Otolemur_garnettii
ENSSSCG00000003366	CHD5	99	96.890	ENSOARG00000013425	CHD5	99	96.890	Ovis_aries
ENSSSCG00000003366	CHD5	100	96.975	ENSPPAG00000034048	CHD5	98	96.981	Pan_paniscus
ENSSSCG00000003366	CHD5	100	96.753	ENSPPRG00000009453	CHD5	98	96.604	Panthera_pardus
ENSSSCG00000003366	CHD5	100	89.425	ENSPTIG00000013926	CHD5	98	89.581	Panthera_tigris_altaica
ENSSSCG00000003366	CHD5	100	96.975	ENSPTRG00000000075	CHD5	98	96.919	Pan_troglodytes
ENSSSCG00000003366	CHD5	100	97.083	ENSPANG00000006765	CHD5	98	96.970	Papio_anubis
ENSSSCG00000003366	CHD5	98	79.101	ENSPKIG00000004282	chd5	93	89.732	Paramormyrops_kingsleyae
ENSSSCG00000003366	CHD5	99	83.452	ENSPSIG00000006414	CHD5	98	83.388	Pelodiscus_sinensis
ENSSSCG00000003366	CHD5	68	96.847	ENSPEMG00000014799	Chd5	100	96.847	Peromyscus_maniculatus_bairdii
ENSSSCG00000003366	CHD5	100	92.595	ENSPCIG00000028310	CHD5	98	89.825	Phascolarctos_cinereus
ENSSSCG00000003366	CHD5	99	75.914	ENSPLAG00000005343	chd5	96	75.972	Poecilia_latipinna
ENSSSCG00000003366	CHD5	100	93.547	ENSPPYG00000001952	CHD5	98	93.298	Pongo_abelii
ENSSSCG00000003366	CHD5	100	97.633	ENSPCOG00000022930	CHD5	98	97.440	Propithecus_coquereli
ENSSSCG00000003366	CHD5	99	78.611	ENSPNYG00000003183	chd5	95	79.840	Pundamilia_nyererei
ENSSSCG00000003366	CHD5	100	95.652	ENSRNOG00000011268	Chd5	98	95.089	Rattus_norvegicus
ENSSSCG00000003366	CHD5	100	97.666	ENSRBIG00000032140	CHD5	95	96.970	Rhinopithecus_bieti
ENSSSCG00000003366	CHD5	100	96.863	ENSRROG00000041146	CHD5	97	96.873	Rhinopithecus_roxellana
ENSSSCG00000003366	CHD5	100	92.680	ENSSBOG00000001955	CHD5	100	97.211	Saimiri_boliviensis_boliviensis
ENSSSCG00000003366	CHD5	99	86.120	ENSSHAG00000018641	CHD5	98	86.253	Sarcophilus_harrisii
ENSSSCG00000003366	CHD5	99	78.625	ENSSFOG00015006296	chd5	90	88.261	Scleropages_formosus
ENSSSCG00000003366	CHD5	99	79.105	ENSSDUG00000017526	chd5	93	90.000	Seriola_dumerili
ENSSSCG00000003366	CHD5	99	81.673	ENSSPUG00000010622	CHD5	96	81.032	Sphenodon_punctatus
ENSSSCG00000003366	CHD5	97	83.426	ENSTGUG00000002634	-	100	83.663	Taeniopygia_guttata
ENSSSCG00000003366	CHD5	55	80.636	ENSTNIG00000004346	chd5	99	81.231	Tetraodon_nigroviridis
ENSSSCG00000003366	CHD5	100	95.432	ENSTTRG00000010468	CHD5	98	95.089	Tursiops_truncatus
ENSSSCG00000003366	CHD5	99	97.796	ENSUAMG00000024509	CHD5	100	96.386	Ursus_americanus
ENSSSCG00000003366	CHD5	99	92.397	ENSUMAG00000024173	CHD5	96	93.774	Ursus_maritimus
ENSSSCG00000003366	CHD5	99	96.696	ENSVVUG00000026480	CHD5	96	97.976	Vulpes_vulpes
ENSSSCG00000003366	CHD5	99	80.413	ENSXETG00000002904	chd5	98	78.860	Xenopus_tropicalis
ENSSSCG00000003366	CHD5	60	83.871	ENSXCOG00000014202	chd5	95	83.871	Xiphophorus_couchianus